Information for 6-AGGCCGCC (Motif 8)


Reverse Opposite:

p-value:1e-7
log p-value:-1.759e+01
Information Content per bp:1.709
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif3.61%
Number of Background Sequences with motif547.1
Percentage of Background Sequences with motif1.21%
Average Position of motif in Targets22.2 +/- 14.5bp
Average Position of motif in Background21.7 +/- 12.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCGCC
CTAGGCCT--

MA0146.2_Zfx/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AGGCCGCC-----
CAGGCCNNGGCCNN

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGGCCGCC
AGCGCGCC

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCGCC
CNAGGCCT--

PB0201.1_Zfp281_2/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGGCCGCC------
AGGAGACCCCCAATTTG

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AGGCCGCC-----
GGTCCCGCCCCCTTCTC

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGGCCGCC------
AGCTCGGCGCCAAAAGC

PB0112.1_E2F2_2/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGGCCGCC------
CCTTCGGCGCCAAAAGG

PB0025.1_Glis2_1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGGCCGCC-----
TATCGACCCCCCACAG

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AGGCCGCC-----
CATAAGACCACCATTAC