Information for 5-AGATAAAA (Motif 4)


Reverse Opposite:

p-value:1e-18
log p-value:-4.237e+01
Information Content per bp:1.872
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif3.72%
Number of Background Sequences with motif239.5
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets19.8 +/- 12.8bp
Average Position of motif in Background21.7 +/- 11.3bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0037.2_GATA3/Jaspar

Match Rank:1
Score:0.97
Offset:0
Orientation:forward strand
Alignment:AGATAAAA
AGATAAGA

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.95
Offset:0
Orientation:forward strand
Alignment:AGATAAAA
AGATAASR

MA0482.1_Gata4/Jaspar

Match Rank:3
Score:0.93
Offset:-3
Orientation:reverse strand
Alignment:---AGATAAAA
NNGAGATAAGA

MA0035.3_Gata1/Jaspar

Match Rank:4
Score:0.93
Offset:-2
Orientation:reverse strand
Alignment:--AGATAAAA-
ANAGATAAGAA

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-AGATAAAA-
NAGATAAGNN

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:6
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--AGATAAAA
NBWGATAAGR

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-AGATAAAA-
CAGATAAGGN

MA0036.2_GATA2/Jaspar

Match Rank:8
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--AGATAAAA----
NCAGATAAGAANNN

PB0023.1_Gata6_1/Jaspar

Match Rank:9
Score:0.88
Offset:-5
Orientation:forward strand
Alignment:-----AGATAAAA----
TATAGAGATAAGAATTG

PB0021.1_Gata3_1/Jaspar

Match Rank:10
Score:0.86
Offset:-7
Orientation:forward strand
Alignment:-------AGATAAAA-------
TTTTTAGAGATAAGAAATAAAG