Information for 11-AGGAGTCCTTCT (Motif 10)


Reverse Opposite:

p-value:1e-6
log p-value:-1.516e+01
Information Content per bp:1.922
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets21.4 +/- 7.2bp
Average Position of motif in Background18.7 +/- 4.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----AGGAGTCCTTCT
NTNNNAGGAGTCTCNTN

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.56
Offset:6
Orientation:forward strand
Alignment:AGGAGTCCTTCT
------GCTTCC

MA0109.1_Hltf/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AGGAGTCCTTCT--
----AACCTTATAT

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AGGAGTCCTTCT
--CNGTCCTCCC

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----AGGAGTCCTTCT-
TNNNNGGTGTCATNTNT

PB0200.1_Zfp187_2/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:AGGAGTCCTTCT------
--GAGCCCTTGTCCCTAA

MA0489.1_JUN_(var.2)/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGGAGTCCTTCT--
ATGAGTCATNTNNT

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber et al.)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AGGAGTCCTTCT
GGGGATTCCCCC-

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AGGAGTCCTTCT
-GCATTCCAGN-

PB0114.1_Egr1_2/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:AGGAGTCCTTCT-----
-NNAGTCCCACTCNNNN