OU_LexBC014_S54_L004_R1_001.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	OU_LexBC014_S54_L004_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	27726
Sequences flagged as poor quality	0
Sequence length	30-76
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTGC	54	0.19476303830339753	No Hit
GTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTGCA	50	0.18033614657721994	No Hit
GGGTTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTG	48	0.17312270071413113	No Hit
TTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTGCAG	35	0.12623530260405397	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCTGAAC	10	0.009898141	129.26262	70
AGATGGA	15	0.0022918142	69.29784	14
GACCTGC	15	0.0022918142	69.29784	6
CGTCATT	20	0.007160856	51.973377	4
TCTACTT	20	0.007160856	51.973377	37
GCTGATC	20	0.007160856	51.973377	20
GCGACCT	30	6.074538E-4	46.19856	4
GTCAGCG	40	4.7538164E-5	43.311146	50
TTAGTCA	50	3.600213E-6	41.5787	47
GCATATT	35	0.0012974263	39.598763	42
AGCGGAG	45	9.4191644E-5	38.568413	53
ACCCGCT	45	9.5203846E-5	38.4988	27
CCCGCTG	45	9.5203846E-5	38.4988	28
CGTGGCG	45	9.5203846E-5	38.4988	20
ATCAGAC	45	9.5203846E-5	38.4988	14
AGACGTG	45	9.5203846E-5	38.4988	17
GACGTGG	45	9.5203846E-5	38.4988	18
CAGACGT	45	9.5203846E-5	38.4988	16
CAGCGGA	45	9.5203846E-5	38.4988	52
AGATCAG	45	9.5203846E-5	38.4988	12