FastQCFastQC Report
Wed 15 Feb 2017
OU_LexBC011_S51_L003_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameOU_LexBC011_S51_L003_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11
Sequences flagged as poor quality0
Sequence length75-76
%GC30

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTGAACAGTTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAATA19.090909090909092No Hit
CTATTATCGCAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAA19.090909090909092No Hit
TGGTATGGGACAAAAAAAAAAAAAAAAAAAAAATAAAATTAAAAAAAAAA19.090909090909092No Hit
CCGTACCCCTCCGAGACGCTACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGA19.090909090909092No Hit
CAATCATCCAACAAGTCATTATTACCCTCACTGTCAACCCAACACAGGCATGCTCATAAGGAAAAAAAAAAAAAA19.090909090909092No Hit
CTATCATCGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA19.090909090909092No Hit
ATTGTCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAAAAAAAAA19.090909090909092No Hit
TGAAAGCGGCTGTGCAGACATTCAATTGTTATTATTATGTCCTACAAGCATAAAAAAAGAAAAAAAAAAAAAAAA19.090909090909092No Hit
GGCGCGACAACACATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAACGGGCGC19.090909090909092No Hit
CGGGGGTTTGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA19.090909090909092No Hit
GTGGGGAAAGTAAATGCTAAGACTAAAAAAAAAAAAAAAAAAAAAAAAAA19.090909090909092No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)