FastQCFastQC Report
Wed 15 Feb 2017
OU_LexBC011_S51_L002_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameOU_LexBC011_S51_L002_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences87
Sequences flagged as poor quality0
Sequence length63-76
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAAAAAAAAAAAAAAA22.2988505747126435No Hit
ATACGCGACCTCAGATCAGACGTGGCGACCCGCTGAATATAAGCATAGTAGTCAGCGGAGGAAAAAAAAAAAAAA11.1494252873563218No Hit
ATTTGGGGGAACACTGTAAATAACGTTATAATACTTAAATACAATTGGTT11.1494252873563218No Hit
ATTTGATGCTGCAAATCAGCTTGTCGTGAAGTTAGCTGATTGTTTAATTAGAATGACTACCACCTCTGTCTGATT11.1494252873563218No Hit
GGATGTGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGAAG11.1494252873563218No Hit
TTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTAT11.1494252873563218No Hit
GTGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAAAAAAAAAAAAA11.1494252873563218No Hit
AATACACCCCCCACAGTTTATGTAAAAAAAAAAAAAAAAAAAGAACGGATCACCACAAGAAGGAGGACGGGTCGC11.1494252873563218No Hit
CTTTAGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCAGATTAGTCAGCGGAGGAAAAAAAAAAAAAAA11.1494252873563218No Hit
TCTCCCCTTTTATACTAATAATCTTATAAAAAAAAAAAAAAAAAAAAAAAAACAAAACAAAAAAAAAAAAAAAAA11.1494252873563218No Hit
TGGCATTTTGTAGATGTGGTTTGACTATTTCTGTATGTCTCCATCTATTGATGAGGGTCTTAAAAAAAAAAAAAA11.1494252873563218No Hit
GTTCGGTCGCCGCCCGGCCCCGCCGGCCGCGAGAGCCGGAGAACTCGGGAGGGAGACGGGGGAGCGAGAGAGAG11.1494252873563218No Hit
GCATGAATTTTTCTGTTTGTCGTGGAAATGTAAGAGTGGTATATTAATAC11.1494252873563218No Hit
TAGTTACCCCTAATAGCCAGAACAGTTTTCAAAAAAAAAAAAAAAAAAAAGATAGGAAGAGCACGGGGGAGAGG11.1494252873563218No Hit
TTGCTTTCTATTACTTGTGCATTTGCCTCACCTGACAATGTATTAAATCG11.1494252873563218No Hit
CATGCCCCCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA11.1494252873563218No Hit
GTCTTGGTCTTGTTGGAGGAGCTTGCTTTAGTTAGATGTCTTATTATTAAAGTTACCTATTATTGTTGGAAATAA11.1494252873563218No Hit
ACTGGCCCAACCCGTCATCTACTCTACCATCTTTGCAGGCACACTCATCA11.1494252873563218No Hit
CGCGACCTCAGATCAGACGTGGCGTCCCGCTGAATTTAAGCATATTAGTCATCGGAGGAAAAAAAAAAAAATAAA11.1494252873563218No Hit
TCCCCTGGCCCAACCCGTCATCTACTCTACCATCTTTGCAGGCACACTCA11.1494252873563218No Hit
GCATAGGGGTTATAATTGTAAGATAAAAATGTGTGTGTGTTTAAGGGAAGTAGGTGGTGGTTAAAATTCTTGGAA11.1494252873563218No Hit
TTGAAGTGAGCCAAGATCGAGCCACTGTACTCCAGCCTGGGCGACAGAGCGAGGCTGTCTTAAAAAAAAAAAAAA11.1494252873563218No Hit
TATATGGGAGTTGTTTTTATATCTTTTACAAATAATAAAAAGATTGATAAAAAACAAAAAAAAAAAAAAAAAAAA11.1494252873563218No Hit
CTCCTCACACCCAAATGGACCAATCTATCACCCTATAGAAGAACTAATGTTAGTATAAGTAAAATTAAAACATAC11.1494252873563218No Hit
GGTAATCGGGCAGCTTCCGGGAAACCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTTGCAAAAAAAAAAAAAAAA11.1494252873563218No Hit
TCGGGTGTGTTATTATTCTGAATTTTGGGGGAGGTTATATGGGTTTAATAGTTTTTAAAAAACCAAAAAAAAAAA11.1494252873563218No Hit
CAAGATAGGCGGGTGAAAAAGTTGAGAAGCCAGATACTAAAAAAAAAAAA11.1494252873563218No Hit
TACCACGATACTCCTACCTATCTCGCCTTTTATACTAATAATCTTATAAAAAAAAAAAAAAAAAAAAGAAGGGGA11.1494252873563218No Hit
CAGATGGCTATGTGCTAGAGGGCAAAGAGTTGGAGTTCTATCTTAGGAAAATCAAGGCCCGCAAAGGCAAATAA11.1494252873563218No Hit
AAGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGAAAAAAAAAAAAAAAAA11.1494252873563218No Hit
GTTCTTGAATGGGTATCTCCTTAGCCTGCTGATTTCTATTTCTTTCTAAAGAAAGTGGGTGGAGAAATTAATTT11.1494252873563218No Hit
AAGGGAGGGAGACGGGGGAGAGAGAGAGAGAGAGAGAAAAAAAAAAAAAA11.1494252873563218No Hit
TGGGTGAGCCGTCTCTGCTGCCCCAGGCTCTGCAGCCCCTGCTGCTGGTTCTGCCCCTGCTGCAGCAGAGGAGA11.1494252873563218No Hit
AATCTAGCTGTATCGAGGCATCAGTCCTGAATAAACATCCTTTCTCAAAAAAAAAAAAAAAAA11.1494252873563218No Hit
GCAGCTGTTTTGTTGACATTCTGAATGCTTCTAAGTAAATACAATTTTTTTTATTAAAAAAAAAAAAAAAAAA11.1494252873563218No Hit
GTTCTGGAGTCTGGATGTTGCTCTCTAAAGACCTTTAATAAAATATTGTACAAAGACAAAATAAAAAAAAAAAAA11.1494252873563218No Hit
GTGTCCGGTGTGGTGTGTCTACTGTGAGGGTGGGCCCTGAGGAGACCTGT11.1494252873563218No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCAGATTAGTCAGCGGAGGAAAAAAAAAAAAAAAAA11.1494252873563218No Hit
TGGCTCGAGCCCAGGAGTTCCAGATCTTCTGCCTGGGCAATATAATATAGCATGACCCTGTTCTAAAAAAAAAAA11.1494252873563218No Hit
TGTATTAGGAGGAGAGAGAGGAAAAAAAAAGAGGAAAGAAGGAAAAAAAAAAAGAATTAAAAAAAAAAAAAAAAA11.1494252873563218No Hit
TGTCTGTGGTTGAATGTGTTTTTGCTTAAATAAAGCTTTTGGTAGTTGTTTAAATTACGAAAAAAAAAAAAAAAA11.1494252873563218No Hit
GTGGACAGCTTCTTTTGAATAAAGACCTGATTATACAGGCAAAAAAAAAAAAAAAAAAAGATCGGAAGAGCCGCC11.1494252873563218No Hit
AGAGGGAGAGAGAGAGAGAGAAAAAAAAAAAAAAAAAAAGAGGGGGGGGG11.1494252873563218No Hit
GACGGGGCCTCAGATCAGACGTGGCGACCCGCTGCATTTAAGCAGAGTAG11.1494252873563218No Hit
GTCCCGCTACGTGGTGGGGGGCTGAGGCAGGAGAATTGCTTGAACCTGGGAGGTGGAGGTTGCAGTGGGCTA11.1494252873563218No Hit
TCGTGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAAAAAAAAAAAAA11.1494252873563218No Hit
CCTGAGGCGGGCAGATCACTTGAGGTTAGGGGTTCAAAACCAGCCTGACCAACATAGTAAAACGCCGTCCCTACA11.1494252873563218No Hit
TTACGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAAAAAAAAAAA11.1494252873563218No Hit
AAGAGTTGGAGTTCTATCTTAGGAAAATCAAGGCCCGCAAAGGCAAATAAATCCTTGTTTTGTCTTCACCCATGT11.1494252873563218No Hit
CTTCATTCGTAAAAAAAAAAAAAAAAAAAAAAAAAAATTAAAAAAAAAAA11.1494252873563218No Hit
TTGAGCACATTCTGCTTAAAGTTGTAACAAATACAGATGAGTTAAAAGAA11.1494252873563218No Hit
AAATTGCCTCATTCGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAATAAGAAAAGAGG11.1494252873563218No Hit
ATCTGACCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAAAAAAAAA11.1494252873563218No Hit
CACGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAAAAAAAAAAAAAA11.1494252873563218No Hit
GTGTGGTGTATCTGAAGGCTATTGAATGCAACTTACAATGCTTAATAAAAATCTTTATTCTATTAGTACAAAAAA11.1494252873563218No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAAAAAAAAAAAAAA11.1494252873563218No Hit
ATGTGTGACAGGTATTATAAAATTTGTGAATAAAACATATAAAATAAAAA11.1494252873563218No Hit
GTCACAACTTGCGTGCGTGGCAGCGGAAGACGATTCCCATATTCTACATT11.1494252873563218No Hit
TAATCTGGGTTGTTTAATGTTTTAATTGATAATTGTCACTGATCGTATTT11.1494252873563218No Hit
TAAGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAAAAAAAAAAAA11.1494252873563218No Hit
TGGGGTCTTGGATGTCGGGTTCGACCACTTGGCCGATGGGAATGGTCTGT11.1494252873563218No Hit
GTGATGTGCAGCATTAAAAAAAATCAAAATAAAAATTAAATGTGAGGAAA11.1494252873563218No Hit
CGCGGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAAAAAAAAAAAAA11.1494252873563218No Hit
AAAGCGCTTGAAGAATTAGAAGCCAAGCGTAAAGAAGAGGAACGATTGGA11.1494252873563218No Hit
TTGGGTGGAAAGCTTTGGACATGAAGGGCTTGGATTATTATTAGACATTT11.1494252873563218No Hit
GAGGTGGGGGTTCCAGGGCACGAGTTCGAGGCCAGCCTGGTCCACATGGGTCGGAAAAAAAAAAAAAAAAAAA11.1494252873563218No Hit
TGGGGCTGGAGGGAGACGTGGGTCCACCAGGCTTCTGGAAAAGTCCTCAA11.1494252873563218No Hit
TGGTGGGGATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTGCAGAC11.1494252873563218No Hit
CATACCACGCTACTCCTACCTATCTCCCCTTTTATACTAATAATCTTACA11.1494252873563218No Hit
TTTGTTGTCCTTTACTACTGTAAACAGTAAATATAGTTTGGTAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAA11.1494252873563218No Hit
CCAAGTTTGAGAAAGATAAAGGAGCCCATTGAAAAGAAAGTGGTTTCTTC11.1494252873563218No Hit
TAGCGACCTCAGCTCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAAAAAAAAAAAAA11.1494252873563218No Hit
GGAAGCGGCTGTGCAGACATTCAATTGTTATTATTATGTAAAAAAAAAAAAAAAAAAAGATCGGAAGAGGGCGC11.1494252873563218No Hit
GGGTTTGTGAGGATGATCAGATGAGTTACGTAGAGAAAGTAGAAATTTCC11.1494252873563218No Hit
TGGGAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGGGAG11.1494252873563218No Hit
GCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCA11.1494252873563218No Hit
TAGATGTGTGATGTTCAGGCACAGGATGCTGAAAGCTATGTTACTATTCT11.1494252873563218No Hit
ATGCGCCCTCAGATCAGACGTGGCGACCCGCGGAATTTAAGCATATTAGTCAGCGGAGGAAAAAAAAAAAAAAAA11.1494252873563218No Hit
GCCGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAAAAAAAAAAAA11.1494252873563218No Hit
TGTAGCGCTGGGCTGTTTTAGTGCCAGGCTGCGGTGGGCAGCCATGAGAA11.1494252873563218No Hit
AGGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAGAAAAAAACAAAAAA11.1494252873563218No Hit
TAAGCGACCTCAGATCAGACGTGGCGACCCGCTGAATATAAGCATATTAGTCAGCGGAGGAGGAAAAAAAAAAAA11.1494252873563218No Hit
TTTTGATGCCTCTCATATGTAATTAGTTCTATTAAACATATTAATTGTATTGTTTAATTTGTCAGGTTTTAGAC11.1494252873563218No Hit
AGCGAACTCAGATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAGAAAAAAAAAAAAAAA11.1494252873563218No Hit
TTGAACCCGGGAGGCGGAGGTTGCAGTGAGCCAAGATCACGCCACTGCAC11.1494252873563218No Hit
CGACCTCAGATCAGACGTGGCGACACGCTGAATTTAAGCATATTAGTCAGCGGAGGAGAAAAAAAAAAAAAAAAA11.1494252873563218No Hit

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCATC50.070.013
ACAGCGC50.070.050
TTGCAGG50.070.033
ATCTTTG50.070.029
CCAACCC50.070.07
CACACTC50.070.040
AGCTCGC50.070.059
GTCATCT50.070.014
GGCACAC50.070.038
GCCCAAC50.070.05
ACTGATT50.070.066
TAAGCTC50.070.057
ACCATCT50.070.026
CATCTTT50.070.028
CAACCCG50.070.08
TGATTTT50.070.068
ATCTACT50.070.017
GCAGGCA50.070.035
CATCTAC50.070.016
ACCCGTC50.070.010