FastQCFastQC Report
Wed 15 Feb 2017
OU_LexBC011_S51_L001_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameOU_LexBC011_S51_L001_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13
Sequences flagged as poor quality0
Sequence length74-76
%GC30

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAATGACTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA17.6923076923076925No Hit
GTTGGTTGTGGTTTATTTTATTTTCTTCATTTTGTTCTGAAATTAAAGTA17.6923076923076925No Hit
TGTGGGTTGGTTTTGGTGTAACATCTTCAACATGTCACACTGGCTATCAAAGAATAAGAAAATTATTGAGTATG17.6923076923076925No Hit
TGTTGTTGTTTTCTGTTGGCAGGACACACCCAAAGATCCAAGTTTGTATTAAAAAGAAATGAAAAAAAGTAAAAA17.6923076923076925No Hit
GCTGGCTGGTGGTGTGTGCCTGTGGTCTCAGCTACTTGGAAGGCTGAGGT17.6923076923076925No Hit
TTTGGTGGAAATTTTTTGTTATGATGTCTGTGTGGAAAGCGGCTGTGCAGACATTCAATTGTTATTATTATGTAA17.6923076923076925No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAA17.6923076923076925No Hit
TAATTATTATTTTTCATGGAAGGAGATATTAAAAATATGATAAATTTATA17.6923076923076925No Hit
CTTTGTCCTCCTTCATTAAAAGTTTTTATGTCTCGTGTCAGAAAAAAAAA17.6923076923076925No Hit
CACTGTCAACCCAACACAGGCATGCTCATAAAAAAAAAAAAAAAAAAAGA17.6923076923076925No Hit
GGGGGGGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA17.6923076923076925No Hit
GGGGGGACAAAAAAAAAAAAAAAAAAAAAAAAAATTATAAAAAAAAAAAA17.6923076923076925No Hit
GGGTGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAATATAATAAATTTAAA17.6923076923076925No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)