Sample	Tumor Fraction	Ploidy
NaomicfDNA2_S3_R1.dedup.filt.bam.500Kb	0.4991	2.057


NaomicfDNA2_S3_R1.dedup.filt.bam.500Kb
Gender:	female
Tumor Fraction:	0.4991
Ploidy:	2.057
Subclone Fraction:	0.997
Fraction Genome Subclonal:	0.07133
Fraction CNA Subclonal:	0.2064
Coverage:	NA
ChrY coverage fraction:	0.0007323
ChrX median log ratio:	0.4841
Student's t mean: -0.3, -0.014, 0.21, 0.39, 0.54, -0.3, 0.21
Student's t precision: 230, 630, 540, 520, 27, 6.4, 240
Gamma Rate Init:	0.025
GC-Map correction MAD:	0.05948


init	n_est	phi_est	BIC	Frac_genome_subclonal	Frac_CNA_subclonal	loglik
n0.5-p2	0.25	2.043	NA	0.095	0.27	5397
n0.5-p3	0.31	2.946	NA	0.43	0.44	5111
n0.6-p2	0.31	2.045	NA	0.06	0.17	5381
n0.6-p3	0.3	2.957	NA	0.43	0.44	5117
n0.7-p2	0.5	2.057	NA	0.071	0.21	5579
n0.7-p3	0.24	2.965	NA	0.44	0.45	5113
n0.8-p2	0.5	2.057	NA	0.07	0.2	5577
n0.8-p3	0.25	2.965	NA	0.44	0.45	5112
n0.9-p2	0.5	2.057	NA	0.07	0.2	5579
n0.9-p3	0.5	2.057	NA	0.07	0.2	5578