Sample	Tumor Fraction	Ploidy
NaomicfDNA4_S3_R1.dedup.filt.bam.500Kb	0.9266	2.043


NaomicfDNA4_S3_R1.dedup.filt.bam.500Kb
Gender:	female
Tumor Fraction:	0.9266
Ploidy:	2.043
Subclone Fraction:	0.5117
Fraction Genome Subclonal:	0.1029
Fraction CNA Subclonal:	0.2981
Coverage:	NA
ChrY coverage fraction:	0.0008047
ChrX median log ratio:	0.4858
Student's t mean: -0.64, -0.02, 0.36, 0.64, 0.85, -0.29, 0.19
Student's t precision: 470, 720, 530, 580, 560, 210, 590
Gamma Rate Init:	0.023
GC-Map correction MAD:	0.05524


init	n_est	phi_est	BIC	Frac_genome_subclonal	Frac_CNA_subclonal	loglik
n0.5-p2	0.079	2.05	NA	0.12	0.36	6124
n0.5-p3	0.37	2.995	NA	0.34	0.35	5272
n0.6-p2	0.073	2.043	NA	0.1	0.3	6805
n0.6-p3	0.37	2.997	NA	0.34	0.35	5270
n0.7-p2	0.54	2.08	NA	0.044	0.13	5769
n0.7-p3	0.31	3.023	NA	0.29	0.29	5203
n0.8-p2	0.54	2.08	NA	0.052	0.15	5795
n0.8-p3	0.32	3.013	NA	0.37	0.38	5246
n0.9-p2	0.54	2.08	NA	0.052	0.15	5794
n0.9-p3	0.54	2.08	NA	0.052	0.15	5794