Sample	Tumor Fraction	Ploidy
NaomicfDNA4_S3_R1.dedup.filt.bam.1Mb	0.9217	2.042


NaomicfDNA4_S3_R1.dedup.filt.bam.1Mb
Gender:	female
Tumor Fraction:	0.9217
Ploidy:	2.042
Subclone Fraction:	0.5115
Fraction Genome Subclonal:	0.09561
Fraction CNA Subclonal:	0.2793
Coverage:	NA
ChrY coverage fraction:	0.0005188
ChrX median log ratio:	0.4866
Student's t mean: -0.64, -0.019, 0.36, 0.63, 0.85, -0.29, 0.19
Student's t precision: 350, 640, 450, 370, 330, 190, 570
Gamma Rate Init:	0.023
GC-Map correction MAD:	0.05962


init	n_est	phi_est	BIC	Frac_genome_subclonal	Frac_CNA_subclonal	loglik
n0.5-p2	0.078	2.042	NA	0.096	0.28	3319
n0.5-p3	0.37	3.013	NA	0.27	0.28	2559
n0.6-p2	0.078	2.042	NA	0.096	0.28	3319
n0.6-p3	0.36	3.016	NA	0.28	0.29	2563
n0.7-p2	0.54	2.077	NA	0.053	0.16	2882
n0.7-p3	0.33	3.024	NA	0.31	0.32	2550
n0.8-p2	0.54	2.076	NA	0.055	0.16	2882
n0.8-p3	0.33	3.025	NA	0.31	0.32	2551
n0.9-p2	0.54	2.077	NA	0.055	0.16	2882
n0.9-p3	0.54	2.077	NA	0.055	0.16	2882