Sample	Tumor Fraction	Ploidy
NaomicfDNA2_S2_R1.dedup.filt.bam.500Kb	0.498	2.049


NaomicfDNA2_S2_R1.dedup.filt.bam.500Kb
Gender:	female
Tumor Fraction:	0.498
Ploidy:	2.049
Subclone Fraction:	0.997
Fraction Genome Subclonal:	0.06961
Fraction CNA Subclonal:	0.2018
Coverage:	NA
ChrY coverage fraction:	0.0007376
ChrX median log ratio:	0.4856
Student's t mean: -0.3, -0.012, 0.21, 0.39, 0.55, -0.3, 0.21
Student's t precision: 240, 660, 530, 540, 26, 6.4, 260
Gamma Rate Init:	0.025
GC-Map correction MAD:	0.05713


init	n_est	phi_est	BIC	Frac_genome_subclonal	Frac_CNA_subclonal	loglik
n0.5-p2	0.28	2.038	NA	0.095	0.27	5486
n0.5-p3	0.32	2.952	NA	0.42	0.43	5171
n0.6-p2	0.29	2.039	NA	0.061	0.18	5469
n0.6-p3	0.3	2.949	NA	0.43	0.44	5190
n0.7-p2	0.5	2.049	NA	0.07	0.2	5665
n0.7-p3	0.22	2.928	NA	0.48	0.49	5233
n0.8-p2	0.5	2.049	NA	0.07	0.2	5665
n0.8-p3	0.22	2.927	NA	0.48	0.49	5233
n0.9-p2	0.5	2.049	NA	0.07	0.2	5664
n0.9-p3	0.5	2.049	NA	0.07	0.2	5664