Sample	mapped_passed	duplicates_failed	secondary_passed	paired in sequencing_failed	duplicates_passed	read2_passed	read1_failed	read1_passed	with mate mapped to a different chr_passed	total_failed	properly paired_passed_pct	singletons_passed	supplementary_passed	singletons_passed_pct	mapped_failed_pct	mapped_passed_pct	supplementary_failed	with itself and mate mapped_failed	mapped_failed	total_passed	properly paired_failed	flagstat_total	with mate mapped to a different chr (mapQ >= 5)_passed	properly paired_failed_pct	with mate mapped to a different chr (mapQ >= 5)_failed	with itself and mate mapped_passed	read2_failed	with mate mapped to a different chr_failed	properly paired_passed	paired in sequencing_passed	singletons_failed	secondary_failed	singletons_failed_pct
NaomicfDNA2_S2_R1	141033433	0	29781	0	0	85674936	0	85674936	2414232	0	79.34	1130392	0	0.66	nan	82.29	0	0	0	171379653	0	171379653	1654593	nan	0	139873260	0	0	135947912	171349872	0	0	nan
NaomicfDNA4_S3_R1	142096448	0	42154	0	0	126608213	0	126651937	2074670	0	54.2	2090008	0	0.83	nan	56.1	0	0	0	253302304	0	253302304	1355843	nan	0	139964286	0	0	137262548	253260150	0	0	nan
NaomicfDNA5_S1_R1	106099492	0	34587	0	0	133507698	0	133572113	1665802	0	37.77	3033471	0	1.14	nan	39.72	0	0	0	267114398	0	267114398	1008588	nan	0	103031434	0	0	100876018	267079811	0	0	nan