269063863 + 0 in total (QC-passed reads + QC-failed reads) 34587 + 0 secondary 0 + 0 supplementary 0 + 0 duplicates 108048957 + 0 mapped (40.16% : N/A) 269029276 + 0 paired in sequencing 134514638 + 0 read1 134514638 + 0 read2 102679124 + 0 properly paired (38.17% : N/A) 104855972 + 0 with itself and mate mapped 3158398 + 0 singletons (1.17% : N/A) 1681884 + 0 with mate mapped to a different chr 1020443 + 0 with mate mapped to a different chr (mapQ>=5)