<?xml version='1.0' encoding='UTF-8' standalone='yes'?>
<tomtom version="5.0.1" release="Thu Jul 26 17:15:19 2018 -0700">
  <model>
    <command_line>tomtom -no-ssc -oc /srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019/task_248-naivegw/cisbp_tomtomout/m1_p3 -verbosity 1 -min-overlap 5 -mi 1 -dist pearson -evalue -thresh 10.0 /srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019/task_248-naivegw/cisbp_tomtomout/query_file /mnt/lab_data/kundaje/msharmin/annotations/Mus_musculus.meme</command_line>
    <distance_measure value="pearson"/>
    <threshold type="evalue">10</threshold>
    <alphabet name="DNA" like="dna">
      <letter id="A" symbol="A" complement="T" name="Adenine" colour="CC0000"/>
      <letter id="C" symbol="C" complement="G" name="Cytosine" colour="0000CC"/>
      <letter id="G" symbol="G" complement="C" name="Guanine" colour="FFB300"/>
      <letter id="T" symbol="T" aliases="U" complement="A" name="Thymine" colour="008000"/>
      <letter id="N" symbol="N" aliases="X." equals="ACGT" name="Any base"/>
      <letter id="V" symbol="V" equals="ACG" name="Not T"/>
      <letter id="H" symbol="H" equals="ACT" name="Not G"/>
      <letter id="D" symbol="D" equals="AGT" name="Not C"/>
      <letter id="B" symbol="B" equals="CGT" name="Not A"/>
      <letter id="M" symbol="M" equals="AC" name="Amino"/>
      <letter id="R" symbol="R" equals="AG" name="Purine"/>
      <letter id="W" symbol="W" equals="AT" name="Weak"/>
      <letter id="S" symbol="S" equals="CG" name="Strong"/>
      <letter id="Y" symbol="Y" equals="CT" name="Pyrimidine"/>
      <letter id="K" symbol="K" equals="GT" name="Keto"/>
    </alphabet>
    <strands>both</strands>
    <background from="--query--" A="0.27" C="0.23" G="0.23" T="0.27"/>
    <host>kali.stanford.edu</host>
    <when>Tue Jul  9 13:22:28 2019</when>
  </model>
  <query_dbs>
    <db source="/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019/task_248-naivegw/cisbp_tomtomout/query_file" name="query_file" loaded="1" excluded="0" last_mod_date="Tue Jul  9 13:22:28 2019"/>
  </query_dbs>
  <target_dbs>
    <db source="/mnt/lab_data/kundaje/msharmin/annotations/Mus_musculus.meme" name="Mus_musculus" loaded="718" excluded="0" last_mod_date="Wed Sep 14 11:58:32 2016"/>
  </target_dbs>
  <queries>
    <motif db="0" id="1" alt="TEMP" length="8" nsites="1">
      <pos A="0.0812818" C="0.708473" G="0.139782" T="0.0704727"/>
      <pos A="0.916073" C="0.0290182" G="0.0236091" T="0.0313"/>
      <pos A="0.0367" C="0.0209091" G="0.0209091" T="0.921482"/>
      <pos A="0.0353545" C="0.0384727" G="0.892182" T="0.034"/>
      <pos A="0.125855" C="0.0668364" G="0.707118" T="0.100191"/>
      <pos A="0.174482" C="0.1803" G="0.0911546" T="0.554064"/>
      <pos A="0.129909" C="0.146536" G="0.624718" T="0.0988364"/>
      <pos A="0.194745" C="0.123573" G="0.5072" T="0.174482"/>
    </motif>
  </queries>
  <targets>
    <motif db="0" id="M1915_1.02" alt="(Zfp523)_(Xenopus_laevis)_(DBD_0.84)" length="20" nsites="1"
        url="http://cisbp.ccbr.utoronto.ca/TFreport.php?searchTF=T049097_1.02">
      <pos A="0.0245454" C="0.111818" G="0.566364" T="0.297273"/>
      <pos A="0.115455" C="0.657273" G="0.111818" T="0.115455"/>
      <pos A="0.479091" C="0.0209091" G="0.293636" T="0.206364"/>
      <pos A="0.479091" C="0.111818" G="0.111818" T="0.297273"/>
      <pos A="0.115455" C="0.0209091" G="0.475455" T="0.388182"/>
      <pos A="0.0245454" C="0.0209091" G="0.93" T="0.0245454"/>
      <pos A="0.297273" C="0.566364" G="0.111818" T="0.0245454"/>
      <pos A="0.842727" C="0.111818" G="0.0209091" T="0.0245454"/>
      <pos A="0.0245454" C="0.202727" G="0.202727" T="0.57"/>
      <pos A="0.0245454" C="0.202727" G="0.384545" T="0.388182"/>
      <pos A="0.479091" C="0.384545" G="0.111818" T="0.0245454"/>
      <pos A="0.0245454" C="0.0209091" G="0.111818" T="0.842727"/>
      <pos A="0.0245454" C="0.0209091" G="0.93" T="0.0245454"/>
      <pos A="0.0245454" C="0.0209091" G="0.93" T="0.0245454"/>
      <pos A="0.206364" C="0.0209091" G="0.657273" T="0.115455"/>
      <pos A="0.660909" C="0.0209091" G="0.111818" T="0.206364"/>
      <pos A="0.479091" C="0.202727" G="0.293636" T="0.0245454"/>
      <pos A="0.388182" C="0.111818" G="0.293636" T="0.206364"/>
      <pos A="0.115455" C="0.111818" G="0.202727" T="0.57"/>
      <pos A="0.297273" C="0.384545" G="0.293636" T="0.0245454"/>
    </motif>
    <motif db="0" id="M1919_1.02" alt="(Mbtps2)_(Homo_sapiens)_(DBD_0.92)" length="12" nsites="1"
        url="http://cisbp.ccbr.utoronto.ca/TFreport.php?searchTF=T049267_1.02">
      <pos A="0.167292" C="0.601911" G="0.122455" T="0.108343"/>
      <pos A="0.908789" C="0.0209091" G="0.0438555" T="0.0264473"/>
      <pos A="0.879124" C="0.03346" G="0.0548846" T="0.0325318"/>
      <pos A="0.342239" C="0.162515" G="0.436979" T="0.0582673"/>
      <pos A="0.933636" C="0.0209091" G="0.0209091" T="0.0245454"/>
      <pos A="0.0245454" C="0.02243" G="0.0209091" T="0.932115"/>
      <pos A="0.02594" C="0.0209091" G="0.928605" T="0.0245454"/>
      <pos A="0.0261936" C="0.0209091" G="0.928352" T="0.0245454"/>
      <pos A="0.127485" C="0.73553" G="0.0257264" T="0.111258"/>
      <pos A="0.134458" C="0.234015" G="0.371437" T="0.26009"/>
      <pos A="0.138515" C="0.131835" G="0.611038" T="0.118611"/>
      <pos A="0.193407" C="0.600009" G="0.0704773" T="0.136105"/>
    </motif>
    <motif db="0" id="M1956_1.02" alt="(Rest)_(Homo_sapiens)_(DBD_0.98)" length="21" nsites="1"
        url="http://cisbp.ccbr.utoronto.ca/TFreport.php?searchTF=T049134_1.02">
      <pos A="0.14511" C="0.120332" G="0.23004" T="0.504518"/>
      <pos A="0.0575618" C="0.174037" G="0.104019" T="0.664382"/>
      <pos A="0.0678082" C="0.798504" G="0.0493718" T="0.0843164"/>
      <pos A="0.848515" C="0.0379336" G="0.0742518" T="0.0393"/>
      <pos A="0.0438154" C="0.0458464" G="0.880125" T="0.0302127"/>
      <pos A="0.0936473" C="0.57486" G="0.20386" T="0.127633"/>
      <pos A="0.916088" C="0.0248718" G="0.0277018" T="0.0313382"/>
      <pos A="0.0262436" C="0.918679" G="0.0277018" T="0.0273754"/>
      <pos A="0.0443573" C="0.859243" G="0.03223" T="0.06417"/>
      <pos A="0.541679" C="0.134758" G="0.112668" T="0.210895"/>
      <pos A="0.148667" C="0.233446" G="0.0911882" T="0.526699"/>
      <pos A="0.0466491" C="0.0248764" G="0.899962" T="0.0285127"/>
      <pos A="0.0358809" C="0.0237427" G="0.914697" T="0.0256791"/>
      <pos A="0.821914" C="0.0844264" G="0.0401909" T="0.0534682"/>
      <pos A="0.0319318" C="0.748182" G="0.153295" T="0.0665909"/>
      <pos A="0.918864" C="0.0260227" G="0.0248864" T="0.0302273"/>
      <pos A="0.0484991" C="0.0283236" G="0.893499" T="0.0296782"/>
      <pos A="0.141535" C="0.595583" G="0.125344" T="0.13754"/>
      <pos A="0.233545" C="0.0386109" G="0.413783" T="0.314061"/>
      <pos A="0.146329" C="0.554356" G="0.203299" T="0.0960145"/>
      <pos A="0.12689" C="0.657845" G="0.0420636" T="0.173202"/>
    </motif>
    <motif db="0" id="M1966_1.02" alt="Nfe2l2" length="15" nsites="1"
        url="http://cisbp.ccbr.utoronto.ca/TFreport.php?searchTF=T025911_1.02">
      <pos A="0.232409" C="0.44415" G="0.157398" T="0.166043"/>
      <pos A="0.526675" C="0.11858" G="0.220007" T="0.134738"/>
      <pos A="0.172304" C="0.320183" G="0.365262" T="0.142252"/>
      <pos A="0.27874" C="0.3302" G="0.211242" T="0.179817"/>
      <pos A="0.635615" C="0.05597" G="0.277608" T="0.0308064"/>
      <pos A="0.0245454" C="0.0209091" G="0.0209091" T="0.933636"/>
      <pos A="0.0245454" C="0.0209091" G="0.911217" T="0.0433282"/>
      <pos A="0.933636" C="0.0209091" G="0.0209091" T="0.0245454"/>
      <pos A="0.0495891" C="0.688327" G="0.168667" T="0.0934164"/>
      <pos A="0.129729" C="0.0459527" G="0.0409446" T="0.783374"/>
      <pos A="0.105938" C="0.708362" G="0.07851" T="0.10719"/>
      <pos A="0.74706" C="0.0246655" G="0.133606" T="0.0946682"/>
      <pos A="0.0370673" C="0.0346836" G="0.894939" T="0.0333109"/>
      <pos A="0.0295545" C="0.896191" G="0.0447009" T="0.0295545"/>
      <pos A="0.804661" C="0.0534664" G="0.0597273" T="0.0821464"/>
    </motif>
    <motif db="0" id="M4612_1.02" alt="(Ctcfl)_(Homo_sapiens)_(DBD_0.81)" length="15" nsites="1"
        url="http://cisbp.ccbr.utoronto.ca/TFreport.php?searchTF=T049507_1.02">
      <pos A="0.0736364" C="0.766364" G="0.119091" T="0.0409091"/>
      <pos A="0.0445454" C="0.89" G="0.0318182" T="0.0336364"/>
      <pos A="0.286364" C="0.144545" G="0.408182" T="0.160909"/>
      <pos A="0.13" C="0.524545" G="0.306364" T="0.0390909"/>
      <pos A="0.122727" C="0.560909" G="0.119091" T="0.197273"/>
      <pos A="0.773636" C="0.0736364" G="0.0863636" T="0.0663636"/>
      <pos A="0.0318182" C="0.0227273" G="0.919091" T="0.0263636"/>
      <pos A="0.160909" C="0.0245455" G="0.782727" T="0.0318182"/>
      <pos A="0.0809091" C="0.0845455" G="0.702727" T="0.131818"/>
      <pos A="0.0409091" C="0.0209091" G="0.906364" T="0.0318182"/>
      <pos A="0.0372727" C="0.0372727" G="0.851818" T="0.0736364"/>
      <pos A="0.0954545" C="0.851818" G="0.0281818" T="0.0245454"/>
      <pos A="0.113636" C="0.0627273" G="0.759091" T="0.0645454"/>
      <pos A="0.0681818" C="0.680909" G="0.148182" T="0.102727"/>
      <pos A="0.137273" C="0.468182" G="0.124545" T="0.27"/>
    </motif>
    <motif db="0" id="M4639_1.02" alt="(Yy1)_(Homo_sapiens)_(DBD_1.00)" length="15" nsites="1"
        url="http://cisbp.ccbr.utoronto.ca/TFreport.php?searchTF=T049073_1.02">
      <pos A="0.374584" C="0.252589" G="0.184595" T="0.188232"/>
      <pos A="0.256225" C="0.277771" G="0.214815" T="0.251188"/>
      <pos A="0.140385" C="0.443976" G="0.189633" T="0.226006"/>
      <pos A="0.213415" C="0.590035" G="0.0788291" T="0.117721"/>
      <pos A="0.905935" C="0.0209091" G="0.04861" T="0.0245454"/>
      <pos A="0.855571" C="0.0360182" G="0.0536464" T="0.0547645"/>
      <pos A="0.213415" C="0.217333" G="0.519525" T="0.0497282"/>
      <pos A="0.933636" C="0.0209091" G="0.0209091" T="0.0245454"/>
      <pos A="0.0245454" C="0.0209091" G="0.0284636" T="0.926082"/>
      <pos A="0.0245454" C="0.0209091" G="0.927482" T="0.0270636"/>
      <pos A="0.0245454" C="0.0209091" G="0.922445" T="0.0321"/>
      <pos A="0.0446918" C="0.894745" G="0.0209091" T="0.0396545"/>
      <pos A="0.0723927" C="0.177041" G="0.6404" T="0.110166"/>
      <pos A="0.112685" C="0.134231" G="0.693284" T="0.0598009"/>
      <pos A="0.10513" C="0.741131" G="0.0662373" T="0.0875018"/>
    </motif>
    <motif db="0" id="M5490_1.02" alt="(Glis1)_(Homo_sapiens)_(DBD_1.00)" length="16" nsites="1"
        url="http://cisbp.ccbr.utoronto.ca/TFreport.php?searchTF=T049175_1.02">
      <pos A="0.173408" C="0.215343" G="0.462724" T="0.148525"/>
      <pos A="0.0268164" C="0.926594" G="0.0213818" T="0.0252082"/>
      <pos A="0.387816" C="0.0209091" G="0.195634" T="0.39564"/>
      <pos A="0.25987" C="0.02463" G="0.0213746" T="0.694126"/>
      <pos A="0.0291182" C="0.9248" G="0.0209091" T="0.0251727"/>
      <pos A="0.0245454" C="0.0209091" G="0.93" T="0.0245454"/>
      <pos A="0.02533" C="0.0418382" G="0.0213018" T="0.91153"/>
      <pos A="0.0249482" C="0.0219155" G="0.927385" T="0.0257527"/>
      <pos A="0.0258973" C="0.0209091" G="0.928648" T="0.0245454"/>
      <pos A="0.0249218" C="0.0218509" G="0.928116" T="0.0251109"/>
      <pos A="0.0245454" C="0.0229891" G="0.92792" T="0.0245454"/>
      <pos A="0.0251164" C="0.02129" G="0.928287" T="0.0253064"/>
      <pos A="0.0245454" C="0.0212873" G="0.929622" T="0.0245454"/>
      <pos A="0.0256945" C="0.0217709" G="0.0209091" T="0.931625"/>
      <pos A="0.119963" C="0.830169" G="0.0250409" T="0.0248273"/>
      <pos A="0.158011" C="0.0358882" G="0.296827" T="0.509275"/>
    </motif>
    <motif db="0" id="M6125_1.02" alt="Ctcf" length="15" nsites="1"
        url="http://cisbp.ccbr.utoronto.ca/TFreport.php?searchTF=T049038_1.02">
      <pos A="0.0899636" C="0.81721" G="0.0389555" T="0.0538709"/>
      <pos A="0.0313127" C="0.923233" G="0.0209091" T="0.0245454"/>
      <pos A="0.798288" C="0.0321882" G="0.0637691" T="0.105755"/>
      <pos A="0.0764291" C="0.519443" G="0.377327" T="0.0268009"/>
      <pos A="0.214034" C="0.370559" G="0.0637691" T="0.351637"/>
      <pos A="0.897543" C="0.0299327" G="0.0389555" T="0.0335691"/>
      <pos A="0.0245454" C="0.0231646" G="0.925489" T="0.0268009"/>
      <pos A="0.412545" C="0.0254209" G="0.532977" T="0.0290573"/>
      <pos A="0.0561264" C="0.0389555" G="0.557792" T="0.347126"/>
      <pos A="0.0335691" C="0.0209091" G="0.914209" T="0.0313127"/>
      <pos A="0.0944754" C="0.0299327" G="0.803675" T="0.0719173"/>
      <pos A="0.166662" C="0.706675" G="0.0276764" T="0.0989873"/>
      <pos A="0.417056" C="0.0231646" G="0.508164" T="0.0516154"/>
      <pos A="0.105755" C="0.499141" G="0.282583" T="0.112522"/>
      <pos A="0.144104" C="0.327699" G="0.0705373" T="0.457661"/>
    </motif>
    <motif db="0" id="M6264_1.02" alt="(Gli1)_(Homo_sapiens)_(DBD_0.99)" length="11" nsites="1"
        url="http://cisbp.ccbr.utoronto.ca/TFreport.php?searchTF=T049108_1.02">
      <pos A="0.0598645" C="0.397137" G="0.305" T="0.237997"/>
      <pos A="0.0245454" C="0.0209091" G="0.0209091" T="0.933636"/>
      <pos A="0.0245454" C="0.0209091" G="0.810221" T="0.144325"/>
      <pos A="0.0245454" C="0.0209091" G="0.871646" T="0.0828991"/>
      <pos A="0.0491154" C="0.0209091" G="0.90543" T="0.0245454"/>
      <pos A="0.107469" C="0.0577646" G="0.103833" T="0.730934"/>
      <pos A="0.0245454" C="0.0209091" G="0.902359" T="0.0521864"/>
      <pos A="0.0491154" C="0.0209091" G="0.813293" T="0.116683"/>
      <pos A="0.0521864" C="0.0792627" G="0.0884764" T="0.780074"/>
      <pos A="0.0245454" C="0.813293" G="0.109975" T="0.0521864"/>
      <pos A="0.108237" C="0.316517" G="0.17524" T="0.400006"/>
    </motif>
    <motif db="0" id="M6527_1.02" alt="(Twist1)_(Homo_sapiens)_(DBD_1.00)" length="10" nsites="1"
        url="http://cisbp.ccbr.utoronto.ca/TFreport.php?searchTF=T015197_1.02">
      <pos A="0.423658" C="0.420022" G="0.0209091" T="0.13541"/>
      <pos A="0.246275" C="0.508714" G="0.220465" T="0.0245454"/>
      <pos A="0.0245454" C="0.730444" G="0.220465" T="0.0245454"/>
      <pos A="0.0245454" C="0.93" G="0.0209091" T="0.0245454"/>
      <pos A="0.933636" C="0.0209091" G="0.0209091" T="0.0245454"/>
      <pos A="0.0245454" C="0.0209091" G="0.708271" T="0.246275"/>
      <pos A="0.0245454" C="0.0209091" G="0.93" T="0.0245454"/>
      <pos A="0.0245454" C="0.0209091" G="0.0209091" T="0.933636"/>
      <pos A="0.0245454" C="0.0209091" G="0.93" T="0.0245454"/>
      <pos A="0.0245454" C="0.0209091" G="0.55306" T="0.401485"/>
    </motif>
    <motif db="0" id="M6540_1.02" alt="(Zbtb4)_(Homo_sapiens)_(DBD_0.96)" length="15" nsites="1"
        url="http://cisbp.ccbr.utoronto.ca/TFreport.php?searchTF=T049061_1.02">
      <pos A="0.0479609" C="0.742678" G="0.184816" T="0.0245454"/>
      <pos A="0.558992" C="0.161401" G="0.184816" T="0.0947909"/>
      <pos A="0.81656" C="0.0911546" G="0.06774" T="0.0245454"/>
      <pos A="0.0947909" C="0.0443246" G="0.256172" T="0.604713"/>
      <pos A="0.604713" C="0.0209091" G="0.349833" T="0.0245454"/>
      <pos A="0.196997" C="0.0209091" G="0.757548" T="0.0245454"/>
      <pos A="0.0245454" C="0.630816" G="0.0209091" T="0.323729"/>
      <pos A="0.0245454" C="0.0209091" G="0.93" T="0.0245454"/>
      <pos A="0.37056" C="0.0209091" G="0.373248" T="0.235283"/>
      <pos A="0.0245454" C="0.0443246" G="0.224212" T="0.706918"/>
      <pos A="0.195416" C="0.120424" G="0.380212" T="0.303947"/>
      <pos A="0.0479609" C="0.0209091" G="0.773528" T="0.157602"/>
      <pos A="0.0245454" C="0.320093" G="0.184816" T="0.470545"/>
      <pos A="0.103336" C="0.0443246" G="0.827794" T="0.0245454"/>
      <pos A="0.271516" C="0.149693" G="0.425462" T="0.153329"/>
    </motif>
  </targets>
  <matches>
    <query idx="0">
      <target idx="2" rc="y" off="9" pv="2.01e-03" ev="1.44e+00" qv="1.00e+00"/>
      <target idx="6" rc="n" off="1" pv="3.32e-03" ev="2.38e+00" qv="1.00e+00"/>
      <target idx="3" rc="y" off="8" pv="6.46e-03" ev="4.64e+00" qv="1.00e+00"/>
      <target idx="5" rc="n" off="6" pv="6.77e-03" ev="4.86e+00" qv="1.00e+00"/>
      <target idx="4" rc="y" off="7" pv="7.09e-03" ev="5.09e+00" qv="1.00e+00"/>
      <target idx="0" rc="n" off="6" pv="7.69e-03" ev="5.52e+00" qv="1.00e+00"/>
      <target idx="10" rc="n" off="7" pv="7.77e-03" ev="5.58e+00" qv="1.00e+00"/>
      <target idx="1" rc="n" off="3" pv="8.35e-03" ev="5.99e+00" qv="1.00e+00"/>
      <target idx="7" rc="y" off="7" pv="8.52e-03" ev="6.11e+00" qv="1.00e+00"/>
      <target idx="8" rc="n" off="0" pv="1.10e-02" ev="7.93e+00" qv="1.00e+00"/>
      <target idx="9" rc="n" off="2" pv="1.14e-02" ev="8.15e+00" qv="1.00e+00"/>
    </query>
  </matches>
  <runtime cycles="456000" seconds="0.456"/>
</tomtom>
