Query_ID Target_ID Optimal_offset p-value E-value q-value Overlap Query_consensus Target_consensus Orientation 1 M2294_1.02 0 6.53756e-09 4.69397e-06 9.26542e-06 11 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC TGGGTGTGGCC + 1 M6127_1.02 0 5.25758e-07 0.000377495 0.000372568 11 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC TGGGTGGGGCC + 1 M1871_1.02 0 5.57377e-06 0.00400197 0.00263316 10 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC TGGGTGGGGC + 1 M0421_1.02 0 8.60781e-06 0.00618041 0.00304987 10 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC TGGGCGTGGC + 1 M0443_1.02 0 1.62227e-05 0.0116479 0.00459834 10 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC TGGGCGTGGC + 1 M0405_1.02 0 2.67528e-05 0.0192085 0.00631927 10 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC TGGGCGTGGC + 1 M2391_1.02 0 0.000164447 0.118073 0.0332949 10 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC GGGGCGGGGC + 1 M6323_1.02 4 0.000351112 0.252098 0.062202 11 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC TGCCTGGGTGTGGCT + 1 M5592_1.02 3 0.000645304 0.463328 0.101618 11 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC AAGGGGGCGTGGCC + 1 M5209_1.02 1 0.000744365 0.534454 0.105496 10 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC GTGGGCGTGGC + 1 M5593_1.02 1 0.00115872 0.83196 0.145817 10 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC GGGGGCGTGGC + 1 M5628_1.02 -1 0.00131841 0.946619 0.145817 8 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC AGGTGTGA + 1 M6265_1.02 -1 0.00133753 0.960346 0.145817 11 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC GTGGGTGGTCT + 1 M6268_1.02 -1 0.00146599 1.05258 0.148407 12 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC GCGTCTGGCATT - 1 M5856_1.02 2 0.00180235 1.29408 0.170293 10 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC AGTGGGCGTGGC + 1 M1627_1.02 -1 0.00258123 1.85332 0.228642 8 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC AGGTGTGA + 1 M6466_1.02 -2 0.00284734 2.04439 0.237378 9 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC TGTCTGGCC + 1 M6120_1.02 -1 0.00349251 2.50762 0.274988 11 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC CTGGGTGGTCC + 1 M1629_1.02 -1 0.00369581 2.65359 0.27568 8 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC AGGTGTGA + 1 M1444_1.02 -3 0.00393318 2.82403 0.278717 10 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC GCATGACCTC + 1 M1454_1.02 -5 0.00493177 3.54101 0.325147 8 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC GTGACCTT + 1 M6456_1.02 -1 0.00504723 3.62391 0.325147 22 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC GGGGGGGGGGGTGGTTTGGGGT + 1 M1455_1.02 -5 0.00571138 4.10077 0.351935 8 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC GTGACCCC + 1 M1632_1.02 -1 0.00625313 4.48975 0.369263 10 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC AGGTGTGAAA + 1 M1457_1.02 -5 0.00662386 4.75593 0.375509 8 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC GTGACCTC + 1 M0440_1.02 -3 0.00827498 5.94143 0.434362 8 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC GTGTAGAC + 1 M1451_1.02 -5 0.00827498 5.94143 0.434362 8 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC TTGACCTC + 1 M1440_1.02 -5 0.00958554 6.88242 0.448758 8 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC GTGACCCC + 1 M1633_1.02 0 0.00978174 7.02329 0.448758 10 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC GAGGTGTGAA + 1 M0403_1.02 -4 0.0104134 7.47684 0.448758 10 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC TTGGGCCCAA + 1 M1630_1.02 0 0.0104134 7.47684 0.448758 10 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC AAGGTGTCAA + 1 M5591_1.02 6 0.0109163 7.83793 0.448758 12 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC CAAAAAGGGGCGTGGCAT + 1 M1843_1.02 1 0.0110479 7.93239 0.448758 10 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC CTAGGTGTGAA + 1 M0394_1.02 -3 0.0110823 7.95711 0.448758 10 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC GGGGGGCCCC + 1 M6537_1.02 0 0.0117421 8.43086 0.449047 11 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC GGGGATTGGCC + 1 M6346_1.02 -1 0.0119542 8.58309 0.449047 19 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC GCATGTGACACCGCCGTGG - 1 M2314_1.02 -15 0.01204 8.64472 0.449047 15 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC GGGAGGGGGCGGGGC + 1 M1631_1.02 0 0.01254 9.0037 0.455702 10 TGGGTGTGGCCTTATTGGCGTGTGTGTGCC AAGGTGTGAA + # Tomtom (Motif Comparison Tool): Version 5.0.1 compiled on Aug 7 2018 at 21:56:33 # The format of this file is described at http://meme-suite.org/doc/tomtom-output-format.html. # tomtom -no-ssc -oc /srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019/task_248-naivegw/cisbp_tomtomout/m1_p20 -verbosity 1 -min-overlap 5 -mi 1 -dist pearson -evalue -thresh 10.0 /srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019/task_248-naivegw/cisbp_tomtomout/query_file /mnt/lab_data/kundaje/msharmin/annotations/Mus_musculus.meme