# Parameters
data_name = "Pax1"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"

from matlas.modisco_report import call_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-07-26 01:28:59,102 [WARNING] git-lfs not installed

homer_matches, modisco_matches = call_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root)

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

TF-MoDISco is using the TensorFlow backend.

CISBP ID of Pax1: M5702_1.02

Shared Cell types both TF-MoDISco and Homer finds Pax1

Cell type	Modisco	Homer
Act B cell	Significance: 1.41278e-08 Significance: 3.61615e-05	Significance: 0.056099300000000005

Unique Cell types only TF-MoDISco finds Pax1

Cell type	Modisco	Homer
cerebellar granule cell precursors(wt)	Significance: 0.0007250669999999999	absent
Retina(newborn 1 day)	Significance: 2.9654e-05	absent
mixed embryonic mouse retina(E14.5)	Significance: 0.000630565	absent
preB cells	Significance: 2.4131e-08	absent

Unique Cell types only Homer finds Pax1

Cell type	Modisco	Homer
Act B cell 24h with oligomycin	absent	Significance: 0.00478442
MZ B cells	absent	Significance: 0.0608952