# Parameters
data_name = "Mesp2"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"

from matlas.modisco_report import call_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-07-26 00:57:44,457 [WARNING] git-lfs not installed

homer_matches, modisco_matches = call_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root)

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

TF-MoDISco is using the TensorFlow backend.

CISBP ID of Mesp2: M5627_1.02

Shared Cell types both TF-MoDISco and Homer finds Mesp2

Cell type	Modisco	Homer
CD4+CD8+ CD69lo large (DP precursors)	Significance: 0.000826491	Significance: 0.024983
CD4+CD8+ CD69lo small (DP precursors)	Significance: 0.00016523099999999998	Significance: 0.0160189

Unique Cell types only TF-MoDISco finds Mesp2

Cell type	Modisco	Homer
embryo_3rd rhombomere (E8.5, deltaC)	Significance: 0.0226393	absent

Unique Cell types only Homer finds Mesp2

Cell type	Modisco	Homer
ISP (Immature single positive)	absent	Significance: 0.0212493
DP	absent	Significance: 0.0277095