# Parameters
data_name = "Mef2b"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"

from matlas.modisco_report import call_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-07-26 00:54:28,052 [WARNING] git-lfs not installed

homer_matches, modisco_matches = call_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root)

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

TF-MoDISco is using the TensorFlow backend.

CISBP ID of Mef2b: M5616_1.02

Shared Cell types both TF-MoDISco and Homer finds Mef2b

Cell type	Modisco	Homer

Unique Cell types only TF-MoDISco finds Mef2b

Cell type	Modisco	Homer
Brain- Medulla Oblongata	Significance: 1.8535499999999998e-06	absent
CD4-CD8+ TCRhi CD69lo CD24lo (MHCII def mice)	Significance: 6.34433e-05	absent
Brain- Cerebellum	Significance: 1.15379e-05	absent
Long Term HSC	Significance: 9.92917e-06	absent
BMDCs(dendritic cell)	Significance: 1.81435e-05	absent
aB LPS+IL21	Significance: 1.8720599999999998e-06	absent
Primary bone marrow derived dendritic cells (DCs, control vector)	Significance: 2.4843200000000002e-06	absent
Act B cell 24h	Significance: 7.821230000000001e-06	absent
ch12 wt	Significance: 5.93404e-06	absent
Tfr (CD4+CD44+CXCR5+PD1+CD25+) WT	Significance: 2.3747100000000002e-05	absent
stomach	Significance: 0.00342051	absent

Unique Cell types only Homer finds Mef2b

Cell type	Modisco	Homer
Fibroblast (adult-8wks)	absent	Significance: 3.61444e-05
lung(P0)	absent	Significance: 9.854590000000001e-05
bone marrow-derived macrophages (Unstimulated)	absent	Significance: 0.000435393
Muscle	absent	Significance: 8.453990000000001e-07