# Parameters
data_name = "Hmga2"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 11:11:36,977 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Hmga2: Motif: M00751_2.00

Forward PWM

Reverse PWM

No Cell types that both TF-MoDISco and Homer finds Hmga2

No Cell types only TF-MoDISco finds Hmga2

Unique Cell types only Homer finds Hmga2: #5

Cell type	Modisco	Homer
wES.Fr_BRN;E14.4;D;En	Absent	Pattern: motif10.motif Significance: 0.0543043
NCR+ILC3+IL23;A;CL	Absent	Pattern: motif8.motif Significance: 0.0112071
wES;RTN;E11.5;D;En	Absent	Pattern: motif4.motif Significance: 0.0306765
3134_mammaryADNCRCNM;D;GE	Absent	Pattern: motif4.motif Significance: 0.028748900000000004
aB_LPS+IL4;A;CL	Absent	Pattern: motif9.motif Significance: 0.021177900000000003