# Parameters
data_name = "Arid3a"
task_idxs = "0-213,216-278"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
overwrite = False

from matlas.reports import collect_motifDB_to_be_displayed, display_comparative_cell_types

load data from labcluster

Using TensorFlow backend.
2019-08-23 10:57:28,815 [WARNING] git-lfs not installed

homer_matches, modisco_matches = collect_motifDB_to_be_displayed(task_idxs, homer_root, modisco_root, 
                                                              overwrite=False)

TF-MoDISco is using the TensorFlow backend.

display_comparative_cell_types(data_name, homer_matches, modisco_matches)

Arid3a: Motif: M00115_2.00

Forward PWM

Reverse PWM

Shared Cell types both TF-MoDISco and Homer finds Arid3a: #3

Cell type	Modisco	Homer
wES;FaceP;E11.5;D;En	Pattern: metacluster_1/pattern_4 Significance: 0.0433354	Pattern: motif3.motif Significance: 0.0422324
MTR_NRN_MN1;methyl3;D;En	Pattern: metacluster_0/pattern_3 Significance: 0.0531254	Pattern: motif6.motif Significance: 0.0485793
MN1;D;En	Pattern: metacluster_1/pattern_9 Significance: 0.048449900000000004	Pattern: motif9.motif Significance: 0.058040699999999994

Unique Cell types only TF-MoDISco finds Arid3a: #10

Cell type	Modisco	Homer
wES;limb;E11.5;D;En	Pattern: metacluster_0/pattern_3 Significance: 0.0460376	Absent
wES;posterior;2;E9.5;A;GEO	Pattern: metacluster_0/pattern_21 Significance: 0.0472419	Absent
wES;FaceP;E14.5;D;En	Pattern: metacluster_0/pattern_7 Significance: 0.0513773	Absent
wES;3rd_Rhmbmr;E8.5;A;GEO	Pattern: metacluster_0/pattern_21 Significance: 0.041919599999999994	Absent
G_NRN_P;A;GEO	Pattern: metacluster_1/pattern_14 Significance: 0.05381609999999999	Absent
wES;MSDRM;E11.5;D;En	Pattern: metacluster_0/pattern_5 Significance: 0.043423199999999995	Absent
NIH3T3;D;En	Pattern: metacluster_1/pattern_8 Significance: 0.05587999999999999	Absent
NIH3T3_FBROBLST;D;En	Pattern: metacluster_1/pattern_8 Significance: 0.042765199999999996	Absent
Md_BRN;D;En	Pattern: metacluster_1/pattern_3 Significance: 0.058556500000000004	Absent
npES;3rd_Rhmbmr_delC;E8.5;A;GEO	Pattern: metacluster_0/pattern_14 Significance: 0.052237599999999995	Absent

Unique Cell types only Homer finds Arid3a: #1

Cell type	Modisco	Homer
wES;Hnd_BRN;E14.5;D;En	Absent	Pattern: motif3.motif Significance: 0.053901199999999996