In [1]:
# Parameters
data_name = "SPNL_CHRD;A;CL"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
tomtom_report_root = "http://mitra.stanford.edu/kundaje/msharmin/report/tomtom_outs/cells"
task_dir = "task_62-naivegw"
perf_file = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/fineFactorized/task_62-naivegw/NaiveauPRC.txt"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
reportfile = "/mnt/lab_data/kundaje/msharmin/annotations/filtering samples_MS2.xlsx"
sheetname = "filter23"
In [2]:
from matlas.reports import display_metadata
load data from labcluster
Using TensorFlow backend.
2019-08-30 18:53:31,218 [WARNING] git-lfs not installed
In [3]:
display_metadata(data_name, perf_file, reportfile, sheetname)
    Sample Information
    MetaData NameDescription
    Cell typespinal cord
    Cell GroupNeural Cells and Tissues
    Experiment NameATAC
    Experiment GroupCasellas Lab
    Pipeline Output
    replicateNaïve overlap peaksIDR peaksTSS enrichment (< 8 is very poor <10 is low)Final number of unique mapping, dup-filtered, chrM filtered readsNumber of reads in called peak regionsFraction of reads in called peak regionsNumber of reads in promoter regionsFraction of reads in promoter regionsNumber of reads in enhancer regionsFraction of reads in enhancer regions
    rep149343277017.60515096140421875850.042934141410.067168575420.3309
    Modelling Metadata
    MetricValue
    auPRC0.692
    Calibrated Recall at 50% FDR0.199
    Number of Positive Examples in Test Data33076
    Number of Negative Examples in Test Data8037775
    Imbalance Ratio in Test Data0.0041
    Test Chromosomeschr2, chr3, chr19
In [4]:
from matlas.reports import display_paiwise_pattern_comparison
from matlas.reports import display_denovo_patterns
In [5]:
display_denovo_patterns(data_name, modisco_root=modisco_root)
TF-MoDISco is using the TensorFlow backend.
The following two links show list of Denovo Patterns and corresponding Motifs discovered by TF-MoDISco
Click here for Denovo Patterns by TF-MoDISco: #24
Pattern NameTF Name(s)Modisco
metacluster_1/pattern_0 # seqlets: 3889 SequenceContrib ScoresHyp_Contrib Scores
Ctcf, Ctcfl
metacluster_1/pattern_1 # seqlets: 2486 SequenceContrib ScoresHyp_Contrib Scores
Sp2, Sp3, Klf3, Sp4, Sp1, Klf6, Wt1, E2f4, Klf1, Egr1,

Sp5, Klf5, Zfp281, Zbtb17, Maz, Klf4, Zfx, Klf7, Klf8, Klf15, Klf12,

Egr2, Ptf1a, E2f1
metacluster_1/pattern_2 # seqlets: 2023 SequenceContrib ScoresHyp_Contrib Scores
Nrf1
metacluster_1/pattern_3 # seqlets: 1825 SequenceContrib ScoresHyp_Contrib Scores
Nfyb, Nfyc, Nfya, Foxi1, Pbx3
metacluster_1/pattern_4 # seqlets: 1264 SequenceContrib ScoresHyp_Contrib Scores
Gabpa, Fli1, Elk4, Ets1, Erg, Elk1, Elf1, Elk3, Etv4, Etv1,

Mxi1, Etv5, Fev, Etv6, Etv2, Etv3, Ehf, Usf2, XP_911724.4, Elf4, Elf5,

Elf2, Nr1h4, Elf3, Spdef, Myc, Spi1, Taf1
metacluster_1/pattern_5 # seqlets: 1156 SequenceContrib ScoresHyp_Contrib Scores
Creb1, Atf2, Jdp2, Atf7, Atf1, Crem, Creb5, Atf3, Fosl2, Usf1,

Hlf, Jun, Nfil3, Fosl1, Tef, Dbp
metacluster_1/pattern_6 # seqlets: 1079 SequenceContrib ScoresHyp_Contrib Scores
Sox9, Sox10, Sox2, Sox3, Sox6, Sox4, Sox17
metacluster_1/pattern_7 # seqlets: 881 SequenceContrib ScoresHyp_Contrib Scores
Thap11, Zfp143, Tbx2
metacluster_1/pattern_8 # seqlets: 795 SequenceContrib ScoresHyp_Contrib Scores
Yy1, Zfp42, Rfx1
metacluster_1/pattern_9 # seqlets: 778 SequenceContrib ScoresHyp_Contrib Scores
Tfap2c, Zfp740, Tfap2a, Egr3
metacluster_1/pattern_10 # seqlets: 679 SequenceContrib ScoresHyp_Contrib Scores
Nfib, Nfia, Nfic
metacluster_1/pattern_11 # seqlets: 623 SequenceContrib ScoresHyp_Contrib Scores
Tfeb, Arntl, Tfec, Tfe3, Mitf, Srebf1, Bhlhe40, Clock, Arnt, Mlx,

Npas2, Srebf2, Max, Creb3l2, Mycn, Tcfl5, Bhlhe41, Xbp1, Mlxip
metacluster_1/pattern_12 # seqlets: 496 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_13 # seqlets: 459 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_14 # seqlets: 452 SequenceContrib ScoresHyp_Contrib Scores
Rfx2, Rfx3, Rfx4, Rfx7, Rfx6
metacluster_1/pattern_15 # seqlets: 450 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_16 # seqlets: 286 SequenceContrib ScoresHyp_Contrib Scores
Tfap2b
metacluster_1/pattern_17 # seqlets: 261 SequenceContrib ScoresHyp_Contrib Scores
Zbtb33
metacluster_1/pattern_18 # seqlets: 158 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_19 # seqlets: 150 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_20 # seqlets: 112 SequenceContrib ScoresHyp_Contrib Scores
Irf2, Irf1, Irf7, Irf8, Prdm1, Irf3, Irf9, Stat2, Stat1, Irf4,

Batf3, Spib
metacluster_1/pattern_21 # seqlets: 81 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_22 # seqlets: 68 SequenceContrib ScoresHyp_Contrib Scores
Pou2f2, Pou2f1
metacluster_1/pattern_23 # seqlets: 45 SequenceContrib ScoresHyp_Contrib Scores
Click here for Motifs by TF-MoDISco: #136
TF NamePattern(s)
Ctcf
Pattern NameModiscoSignificance
metacluster_1/pattern_02.82565e-10
metacluster_1/pattern_160.0170446
Ctcfl
Pattern NameModiscoSignificance
metacluster_1/pattern_06.41926e-12
metacluster_1/pattern_40.057717399999999995
metacluster_1/pattern_80.0590043
metacluster_1/pattern_90.00893833
metacluster_1/pattern_150.044941800000000004
metacluster_1/pattern_160.00333613
metacluster_1/pattern_180.0183279
metacluster_1/pattern_210.0152549
metacluster_1/pattern_230.00492566
Sp2
Pattern NameModiscoSignificance
metacluster_1/pattern_15.485059999999999e-16
metacluster_1/pattern_20.0346779
metacluster_1/pattern_44.1090299999999995e-05
metacluster_1/pattern_50.0322934
metacluster_1/pattern_85.49554e-05
metacluster_1/pattern_91.15728e-11
metacluster_1/pattern_121.4043900000000001e-05
metacluster_1/pattern_130.000340311
metacluster_1/pattern_156.98135e-06
metacluster_1/pattern_163.31717e-08
metacluster_1/pattern_182.27781e-09
metacluster_1/pattern_190.00567677
metacluster_1/pattern_215.9136e-09
metacluster_1/pattern_231.16256e-06
Sp3
Pattern NameModiscoSignificance
metacluster_1/pattern_18.17508e-11
metacluster_1/pattern_40.00063933
metacluster_1/pattern_80.0007347189999999999
metacluster_1/pattern_93.51979e-09
metacluster_1/pattern_125.83515e-05
metacluster_1/pattern_130.0019458
metacluster_1/pattern_150.000289807
metacluster_1/pattern_164.8295999999999995e-06
metacluster_1/pattern_186.827380000000001e-08
metacluster_1/pattern_190.027767
metacluster_1/pattern_212.01028e-07
metacluster_1/pattern_238.591839999999999e-06
Klf3
Pattern NameModiscoSignificance
metacluster_1/pattern_15.97467e-09
metacluster_1/pattern_40.00634912
metacluster_1/pattern_80.047138099999999995
metacluster_1/pattern_97.50535e-08
metacluster_1/pattern_120.0016384
metacluster_1/pattern_130.040845099999999995
metacluster_1/pattern_150.00752082
metacluster_1/pattern_160.00333613
metacluster_1/pattern_182.66238e-05
metacluster_1/pattern_218.1306e-05
metacluster_1/pattern_230.000540291
Sp4
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0022735
metacluster_1/pattern_80.047138099999999995
metacluster_1/pattern_90.0007494
metacluster_1/pattern_120.036123699999999995
metacluster_1/pattern_180.0429714
metacluster_1/pattern_210.0363905
Sp1
Pattern NameModiscoSignificance
metacluster_1/pattern_10.000869705
metacluster_1/pattern_44.1090299999999995e-05
metacluster_1/pattern_80.00039885
metacluster_1/pattern_99.75274e-05
metacluster_1/pattern_120.000267839
metacluster_1/pattern_130.0019458
metacluster_1/pattern_150.000167934
metacluster_1/pattern_164.8295999999999995e-06
metacluster_1/pattern_189.300610000000001e-07
metacluster_1/pattern_210.00645027
metacluster_1/pattern_230.0480712
Klf6
Pattern NameModiscoSignificance
metacluster_1/pattern_12.2927e-07
metacluster_1/pattern_91.2825299999999999e-05
metacluster_1/pattern_120.000142289
metacluster_1/pattern_150.0128936
metacluster_1/pattern_160.0382181
metacluster_1/pattern_180.00994938
metacluster_1/pattern_210.00499194
metacluster_1/pattern_230.013474600000000002
Wt1
Pattern NameModiscoSignificance
metacluster_1/pattern_10.000140708
metacluster_1/pattern_40.0243355
metacluster_1/pattern_80.035386400000000005
metacluster_1/pattern_91.2825299999999999e-05
metacluster_1/pattern_120.000267839
metacluster_1/pattern_150.0560572
metacluster_1/pattern_160.00651208
metacluster_1/pattern_180.00382261
metacluster_1/pattern_210.00412936
metacluster_1/pattern_230.0119538
E2f4
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00021977799999999998
metacluster_1/pattern_90.000643832
Klf1
Pattern NameModiscoSignificance
metacluster_1/pattern_10.000292524
metacluster_1/pattern_90.00788272
metacluster_1/pattern_120.00307807
metacluster_1/pattern_180.0458043
metacluster_1/pattern_210.0363905
metacluster_1/pattern_230.056826699999999994
Egr1
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00828121
metacluster_1/pattern_80.05432669999999999
metacluster_1/pattern_90.00213463
metacluster_1/pattern_120.025513499999999998
metacluster_1/pattern_160.015983
metacluster_1/pattern_180.0208635
metacluster_1/pattern_210.0211572
metacluster_1/pattern_230.0123416
Sp5
Pattern NameModiscoSignificance
metacluster_1/pattern_10.000617845
metacluster_1/pattern_40.026229000000000002
metacluster_1/pattern_94.6303800000000005e-07
metacluster_1/pattern_120.00119571
metacluster_1/pattern_180.057501300000000005
metacluster_1/pattern_230.0123416
Klf5
Pattern NameModiscoSignificance
metacluster_1/pattern_10.000631753
metacluster_1/pattern_90.000137435
metacluster_1/pattern_230.022904
Zfp281
Pattern NameModiscoSignificance
metacluster_1/pattern_10.000973777
metacluster_1/pattern_90.028246299999999995
metacluster_1/pattern_120.0347473
metacluster_1/pattern_180.0458043
metacluster_1/pattern_210.0363905
Zbtb17
Pattern NameModiscoSignificance
metacluster_1/pattern_10.000869705
metacluster_1/pattern_40.00690433
metacluster_1/pattern_80.011181299999999998
metacluster_1/pattern_90.000333796
metacluster_1/pattern_120.00289972
metacluster_1/pattern_150.030108
metacluster_1/pattern_160.00493958
metacluster_1/pattern_180.00215665
metacluster_1/pattern_210.00151641
metacluster_1/pattern_230.00570346
Maz
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00100291
metacluster_1/pattern_40.0260055
metacluster_1/pattern_80.047138099999999995
metacluster_1/pattern_92.9889e-05
metacluster_1/pattern_120.000267839
metacluster_1/pattern_160.040615
metacluster_1/pattern_180.0242472
metacluster_1/pattern_230.0492413
Klf4
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0036585999999999997
metacluster_1/pattern_96.83081e-05
Zfx
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00493334
metacluster_1/pattern_20.0436682
metacluster_1/pattern_40.0197285
metacluster_1/pattern_50.00590268
metacluster_1/pattern_80.00290667
metacluster_1/pattern_90.0244715
metacluster_1/pattern_130.0019458
metacluster_1/pattern_150.000662759
metacluster_1/pattern_160.00925958
metacluster_1/pattern_170.0222468
metacluster_1/pattern_180.00382261
metacluster_1/pattern_190.00334269
metacluster_1/pattern_210.00499194
metacluster_1/pattern_230.0186877
Klf7
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0022735
metacluster_1/pattern_91.2825299999999999e-05
Klf8
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00462667
metacluster_1/pattern_93.37618e-05
Klf15
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00481916
metacluster_1/pattern_90.000643832
metacluster_1/pattern_120.000174686
metacluster_1/pattern_180.0266697
metacluster_1/pattern_210.0306688
metacluster_1/pattern_230.0123416
Klf12
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00559933
metacluster_1/pattern_90.0482498
Egr2
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00882433
metacluster_1/pattern_80.05432669999999999
metacluster_1/pattern_90.025959500000000003
metacluster_1/pattern_120.0530179
metacluster_1/pattern_210.0128259
Ptf1a
Pattern NameModiscoSignificance
metacluster_1/pattern_10.027826
metacluster_1/pattern_120.0208459
E2f1
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0354278
Nrf1
Pattern NameModiscoSignificance
metacluster_1/pattern_21.4880100000000003e-06
Nfyb
Pattern NameModiscoSignificance
metacluster_1/pattern_33.2653299999999998e-12
Nfyc
Pattern NameModiscoSignificance
metacluster_1/pattern_35.59777e-06
Nfya
Pattern NameModiscoSignificance
metacluster_1/pattern_35.59777e-06
Foxi1
Pattern NameModiscoSignificance
metacluster_1/pattern_38.503279999999999e-06
Pbx3
Pattern NameModiscoSignificance
metacluster_1/pattern_37.73374e-05
Gabpa
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00140465
Fli1
Pattern NameModiscoSignificance
metacluster_1/pattern_40.000796241
metacluster_1/pattern_90.028246299999999995
Elk4
Pattern NameModiscoSignificance
metacluster_1/pattern_40.000474696
Ets1
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00063933
Erg
Pattern NameModiscoSignificance
metacluster_1/pattern_40.000738444
Elk1
Pattern NameModiscoSignificance
metacluster_1/pattern_40.000295169
Elf1
Pattern NameModiscoSignificance
metacluster_1/pattern_44.1090299999999995e-05
Elk3
Pattern NameModiscoSignificance
metacluster_1/pattern_40.000738444
Etv4
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00690433
Etv1
Pattern NameModiscoSignificance
metacluster_1/pattern_40.000576479
Mxi1
Pattern NameModiscoSignificance
metacluster_1/pattern_40.000576479
metacluster_1/pattern_90.0275409
metacluster_1/pattern_130.0152329
metacluster_1/pattern_160.00525048
metacluster_1/pattern_180.0135202
metacluster_1/pattern_210.00554773
metacluster_1/pattern_230.00492566
Etv5
Pattern NameModiscoSignificance
metacluster_1/pattern_40.000808315
Fev
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00140465
Etv6
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0450347
Etv2
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00191973
Etv3
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00192709
Ehf
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00253212
Usf2
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00195156
metacluster_1/pattern_56.25427e-06
metacluster_1/pattern_90.0147304
metacluster_1/pattern_110.00254842
metacluster_1/pattern_130.0165635
metacluster_1/pattern_150.0513349
metacluster_1/pattern_160.004051699999999999
metacluster_1/pattern_180.00480887
metacluster_1/pattern_190.027433199999999998
metacluster_1/pattern_210.000277944
metacluster_1/pattern_230.00492566
XP_911724.4
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00210612
Elf4
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00508657
Elf5
Pattern NameModiscoSignificance
metacluster_1/pattern_40.026316500000000003
Elf2
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0164274
Nr1h4
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0128921
metacluster_1/pattern_90.026189599999999997
Elf3
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0397815
Spdef
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0164274
Myc
Pattern NameModiscoSignificance
metacluster_1/pattern_40.027544700000000002
metacluster_1/pattern_110.0193157
Spi1
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0298661
Taf1
Pattern NameModiscoSignificance
metacluster_1/pattern_40.030238900000000003
metacluster_1/pattern_84.28641e-06
Creb1
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00132816
metacluster_1/pattern_110.0568165
Atf2
Pattern NameModiscoSignificance
metacluster_1/pattern_50.000752285
metacluster_1/pattern_110.048001199999999994
Jdp2
Pattern NameModiscoSignificance
metacluster_1/pattern_50.000427633
metacluster_1/pattern_110.0476351
Atf7
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00020250200000000002
metacluster_1/pattern_110.030913799999999998
Atf1
Pattern NameModiscoSignificance
metacluster_1/pattern_50.0591227
metacluster_1/pattern_110.015744
Crem
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00586942
Creb5
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00132816
Atf3
Pattern NameModiscoSignificance
metacluster_1/pattern_50.0047956000000000006
Fosl2
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00597178
Usf1
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00687356
metacluster_1/pattern_110.00254842
Hlf
Pattern NameModiscoSignificance
metacluster_1/pattern_50.015381
metacluster_1/pattern_110.0346708
Jun
Pattern NameModiscoSignificance
metacluster_1/pattern_50.0165623
Nfil3
Pattern NameModiscoSignificance
metacluster_1/pattern_50.0210715
Fosl1
Pattern NameModiscoSignificance
metacluster_1/pattern_50.0278211
Tef
Pattern NameModiscoSignificance
metacluster_1/pattern_50.028951599999999997
Dbp
Pattern NameModiscoSignificance
metacluster_1/pattern_50.0531899
Sox9
Pattern NameModiscoSignificance
metacluster_1/pattern_63.77461e-13
Sox10
Pattern NameModiscoSignificance
metacluster_1/pattern_64.03698e-05
Sox2
Pattern NameModiscoSignificance
metacluster_1/pattern_67.89077e-05
Sox3
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00680862
Sox6
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00290416
Sox4
Pattern NameModiscoSignificance
metacluster_1/pattern_60.0183864
Sox17
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00858338
Thap11
Pattern NameModiscoSignificance
metacluster_1/pattern_74.54159e-23
Zfp143
Pattern NameModiscoSignificance
metacluster_1/pattern_74.54159e-23
Tbx2
Pattern NameModiscoSignificance
metacluster_1/pattern_77.55117e-13
Yy1
Pattern NameModiscoSignificance
metacluster_1/pattern_88.75636e-06
Zfp42
Pattern NameModiscoSignificance
metacluster_1/pattern_80.011373600000000001
Rfx1
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0401325
metacluster_1/pattern_90.0313519
metacluster_1/pattern_142.82534e-10
metacluster_1/pattern_150.0128936
metacluster_1/pattern_160.00651208
metacluster_1/pattern_180.0229532
metacluster_1/pattern_190.018834299999999998
metacluster_1/pattern_210.00515917
metacluster_1/pattern_230.0110008
Tfap2c
Pattern NameModiscoSignificance
metacluster_1/pattern_90.03918169999999999
Zfp740
Pattern NameModiscoSignificance
metacluster_1/pattern_90.016183000000000003
Tfap2a
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0426438
Egr3
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0426438
metacluster_1/pattern_210.045418900000000005
Nfib
Pattern NameModiscoSignificance
metacluster_1/pattern_105.00941e-07
Nfia
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0009396680000000001
Nfic
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0164728
Tfeb
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00116198
Arntl
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00373608
Tfec
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00197453
Tfe3
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00211761
Mitf
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00127125
Srebf1
Pattern NameModiscoSignificance
metacluster_1/pattern_110.03458169999999999
Bhlhe40
Pattern NameModiscoSignificance
metacluster_1/pattern_110.011665799999999999
Clock
Pattern NameModiscoSignificance
metacluster_1/pattern_110.025611500000000002
Arnt
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0348608
Mlx
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0193157
Npas2
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00373608
Srebf2
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00475225
Max
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00661815
Creb3l2
Pattern NameModiscoSignificance
metacluster_1/pattern_110.024305
Mycn
Pattern NameModiscoSignificance
metacluster_1/pattern_110.05737040000000001
Tcfl5
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0112368
Bhlhe41
Pattern NameModiscoSignificance
metacluster_1/pattern_110.019958700000000003
Xbp1
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0382048
Mlxip
Pattern NameModiscoSignificance
metacluster_1/pattern_110.048001199999999994
Rfx2
Pattern NameModiscoSignificance
metacluster_1/pattern_141.2242899999999999e-08
metacluster_1/pattern_191.9770499999999998e-07
Rfx3
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00612929
metacluster_1/pattern_190.00334269
Rfx4
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0005571780000000001
Rfx7
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00246247
metacluster_1/pattern_190.018834299999999998
Rfx6
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00789477
metacluster_1/pattern_190.018834299999999998
Tfap2b
Pattern NameModiscoSignificance
metacluster_1/pattern_160.020047099999999998
Zbtb33
Pattern NameModiscoSignificance
metacluster_1/pattern_171.253e-07
Irf2
Pattern NameModiscoSignificance
metacluster_1/pattern_200.0011244999999999998
Irf1
Pattern NameModiscoSignificance
metacluster_1/pattern_201.0815700000000001e-08
Irf7
Pattern NameModiscoSignificance
metacluster_1/pattern_207.73583e-05
Irf8
Pattern NameModiscoSignificance
metacluster_1/pattern_200.00010378799999999999
Prdm1
Pattern NameModiscoSignificance
metacluster_1/pattern_200.00021962
Irf3
Pattern NameModiscoSignificance
metacluster_1/pattern_200.0010777999999999999
Irf9
Pattern NameModiscoSignificance
metacluster_1/pattern_200.00142978
Stat2
Pattern NameModiscoSignificance
metacluster_1/pattern_200.00142978
Stat1
Pattern NameModiscoSignificance
metacluster_1/pattern_200.00514843
Irf4
Pattern NameModiscoSignificance
metacluster_1/pattern_200.00520317
Batf3
Pattern NameModiscoSignificance
metacluster_1/pattern_200.0113863
Spib
Pattern NameModiscoSignificance
metacluster_1/pattern_200.016273
Pou2f2
Pattern NameModiscoSignificance
metacluster_1/pattern_220.00409383
Pou2f1
Pattern NameModiscoSignificance
metacluster_1/pattern_220.031815699999999995
In [6]:
display_paiwise_pattern_comparison(data_name, modisco_root, homer_root)
Number of CISBP TFs obtained by TF-MoDISco and Homer
Shared TFs between TF-MoDISco and Homer: #71
TF NameModiscoHomer
Srebf2
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00475225
Pattern NameHomerSignificance
motif7.motif0.03744430000000001
Ctcf
Pattern NameModiscoSignificance
metacluster_1/pattern_02.82565e-10
metacluster_1/pattern_160.0170446
Pattern NameHomerSignificance
motif1.motif0.0009310119999999999
motif16.motif0.0434967
Klf3
Pattern NameModiscoSignificance
metacluster_1/pattern_15.97467e-09
metacluster_1/pattern_40.00634912
metacluster_1/pattern_80.047138099999999995
metacluster_1/pattern_97.50535e-08
metacluster_1/pattern_120.0016384
metacluster_1/pattern_130.040845099999999995
metacluster_1/pattern_150.00752082
metacluster_1/pattern_160.00333613
metacluster_1/pattern_182.66238e-05
metacluster_1/pattern_218.1306e-05
metacluster_1/pattern_230.000540291
Pattern NameHomerSignificance
motif2.motif0.000155143
XP_911724.4
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00210612
Pattern NameHomerSignificance
motif5.motif0.00326983
Fev
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00140465
Pattern NameHomerSignificance
motif5.motif0.010198299999999999
E2f1
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0354278
Pattern NameHomerSignificance
motif2.motif0.0495085
Elk1
Pattern NameModiscoSignificance
metacluster_1/pattern_40.000295169
Pattern NameHomerSignificance
motif5.motif0.000524238
Klf5
Pattern NameModiscoSignificance
metacluster_1/pattern_10.000631753
metacluster_1/pattern_90.000137435
metacluster_1/pattern_230.022904
Pattern NameHomerSignificance
motif2.motif0.017931700000000002
Fli1
Pattern NameModiscoSignificance
metacluster_1/pattern_40.000796241
metacluster_1/pattern_90.028246299999999995
Pattern NameHomerSignificance
motif5.motif0.00344382
Zfp143
Pattern NameModiscoSignificance
metacluster_1/pattern_74.54159e-23
Pattern NameHomerSignificance
motif3.motif7.36023e-07
Etv4
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00690433
Pattern NameHomerSignificance
motif5.motif0.00718166
Elk4
Pattern NameModiscoSignificance
metacluster_1/pattern_40.000474696
Pattern NameHomerSignificance
motif5.motif0.00326983
Etv5
Pattern NameModiscoSignificance
metacluster_1/pattern_40.000808315
Pattern NameHomerSignificance
motif5.motif0.00106009
Etv6
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0450347
Pattern NameHomerSignificance
motif5.motif0.00256214
Zbtb33
Pattern NameModiscoSignificance
metacluster_1/pattern_171.253e-07
Pattern NameHomerSignificance
motif11.motif0.0007278610000000001
Tfec
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00197453
Pattern NameHomerSignificance
motif7.motif0.03744430000000001
Mitf
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00127125
Pattern NameHomerSignificance
motif7.motif0.044163
Bhlhe40
Pattern NameModiscoSignificance
metacluster_1/pattern_110.011665799999999999
Pattern NameHomerSignificance
motif7.motif0.044163
Etv1
Pattern NameModiscoSignificance
metacluster_1/pattern_40.000576479
Pattern NameHomerSignificance
motif5.motif0.00135036
Yy1
Pattern NameModiscoSignificance
metacluster_1/pattern_88.75636e-06
Pattern NameHomerSignificance
motif15.motif5.27521e-09
Klf8
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00462667
metacluster_1/pattern_93.37618e-05
Pattern NameHomerSignificance
motif2.motif0.000936297
Ehf
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00253212
Pattern NameHomerSignificance
motif5.motif0.027931400000000002
Sp1
Pattern NameModiscoSignificance
metacluster_1/pattern_10.000869705
metacluster_1/pattern_44.1090299999999995e-05
metacluster_1/pattern_80.00039885
metacluster_1/pattern_99.75274e-05
metacluster_1/pattern_120.000267839
metacluster_1/pattern_130.0019458
metacluster_1/pattern_150.000167934
metacluster_1/pattern_164.8295999999999995e-06
metacluster_1/pattern_189.300610000000001e-07
metacluster_1/pattern_210.00645027
metacluster_1/pattern_230.0480712
Pattern NameHomerSignificance
motif2.motif0.00931279
Elf2
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0164274
Pattern NameHomerSignificance
motif5.motif0.0477272
Erg
Pattern NameModiscoSignificance
metacluster_1/pattern_40.000738444
Pattern NameHomerSignificance
motif5.motif0.00576498
Jdp2
Pattern NameModiscoSignificance
metacluster_1/pattern_50.000427633
metacluster_1/pattern_110.0476351
Pattern NameHomerSignificance
motif7.motif0.0463445
Foxi1
Pattern NameModiscoSignificance
metacluster_1/pattern_38.503279999999999e-06
Pattern NameHomerSignificance
motif4.motif0.00432553
Thap11
Pattern NameModiscoSignificance
metacluster_1/pattern_74.54159e-23
Pattern NameHomerSignificance
motif3.motif3.54015e-07
Tfe3
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00211761
Pattern NameHomerSignificance
motif7.motif0.03744430000000001
Egr1
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00828121
metacluster_1/pattern_80.05432669999999999
metacluster_1/pattern_90.00213463
metacluster_1/pattern_120.025513499999999998
metacluster_1/pattern_160.015983
metacluster_1/pattern_180.0208635
metacluster_1/pattern_210.0211572
metacluster_1/pattern_230.0123416
Pattern NameHomerSignificance
motif2.motif0.0210134
Tfeb
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00116198
Pattern NameHomerSignificance
motif7.motif0.03744430000000001
Usf1
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00687356
metacluster_1/pattern_110.00254842
Pattern NameHomerSignificance
motif7.motif0.044163
Tbx2
Pattern NameModiscoSignificance
metacluster_1/pattern_77.55117e-13
Pattern NameHomerSignificance
motif3.motif5.75431e-05
Pbx3
Pattern NameModiscoSignificance
metacluster_1/pattern_37.73374e-05
Pattern NameHomerSignificance
motif4.motif0.00823419
Klf1
Pattern NameModiscoSignificance
metacluster_1/pattern_10.000292524
metacluster_1/pattern_90.00788272
metacluster_1/pattern_120.00307807
metacluster_1/pattern_180.0458043
metacluster_1/pattern_210.0363905
metacluster_1/pattern_230.056826699999999994
Pattern NameHomerSignificance
motif2.motif0.037330300000000004
Elk3
Pattern NameModiscoSignificance
metacluster_1/pattern_40.000738444
Pattern NameHomerSignificance
motif5.motif0.00106009
Arntl
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00373608
Pattern NameHomerSignificance
motif7.motif0.03744430000000001
E2f4
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00021977799999999998
metacluster_1/pattern_90.000643832
Pattern NameHomerSignificance
motif2.motif0.000506416
Atf7
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00020250200000000002
metacluster_1/pattern_110.030913799999999998
Pattern NameHomerSignificance
motif7.motif0.03744430000000001
Atf2
Pattern NameModiscoSignificance
metacluster_1/pattern_50.000752285
metacluster_1/pattern_110.048001199999999994
Pattern NameHomerSignificance
motif7.motif0.0463445
Spdef
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0164274
Pattern NameHomerSignificance
motif5.motif0.0132362
Nfyb
Pattern NameModiscoSignificance
metacluster_1/pattern_33.2653299999999998e-12
Pattern NameHomerSignificance
motif4.motif3.28569e-05
Gabpa
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00140465
Pattern NameHomerSignificance
motif5.motif0.00106009
Elf4
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00508657
Pattern NameHomerSignificance
motif5.motif0.00180756
Zfx
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00493334
metacluster_1/pattern_20.0436682
metacluster_1/pattern_40.0197285
metacluster_1/pattern_50.00590268
metacluster_1/pattern_80.00290667
metacluster_1/pattern_90.0244715
metacluster_1/pattern_130.0019458
metacluster_1/pattern_150.000662759
metacluster_1/pattern_160.00925958
metacluster_1/pattern_170.0222468
metacluster_1/pattern_180.00382261
metacluster_1/pattern_190.00334269
metacluster_1/pattern_210.00499194
metacluster_1/pattern_230.0186877
Pattern NameHomerSignificance
motif2.motif0.0495085
Sp4
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0022735
metacluster_1/pattern_80.047138099999999995
metacluster_1/pattern_90.0007494
metacluster_1/pattern_120.036123699999999995
metacluster_1/pattern_180.0429714
metacluster_1/pattern_210.0363905
Pattern NameHomerSignificance
motif2.motif0.029250799999999997
Mlx
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0193157
Pattern NameHomerSignificance
motif7.motif0.044163
Nfyc
Pattern NameModiscoSignificance
metacluster_1/pattern_35.59777e-06
Pattern NameHomerSignificance
motif4.motif1.11953e-05
Klf4
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0036585999999999997
metacluster_1/pattern_96.83081e-05
Pattern NameHomerSignificance
motif2.motif0.000506416
Klf12
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00559933
metacluster_1/pattern_90.0482498
Pattern NameHomerSignificance
motif2.motif0.012585200000000001
Atf1
Pattern NameModiscoSignificance
metacluster_1/pattern_50.0591227
metacluster_1/pattern_110.015744
Pattern NameHomerSignificance
motif7.motif0.00583704
Elf3
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0397815
Pattern NameHomerSignificance
motif5.motif0.012721399999999999
Srebf1
Pattern NameModiscoSignificance
metacluster_1/pattern_110.03458169999999999
Pattern NameHomerSignificance
motif7.motif0.044163
Clock
Pattern NameModiscoSignificance
metacluster_1/pattern_110.025611500000000002
Pattern NameHomerSignificance
motif7.motif0.03744430000000001
Elf1
Pattern NameModiscoSignificance
metacluster_1/pattern_44.1090299999999995e-05
Pattern NameHomerSignificance
motif5.motif0.00117867
Klf6
Pattern NameModiscoSignificance
metacluster_1/pattern_12.2927e-07
metacluster_1/pattern_91.2825299999999999e-05
metacluster_1/pattern_120.000142289
metacluster_1/pattern_150.0128936
metacluster_1/pattern_160.0382181
metacluster_1/pattern_180.00994938
metacluster_1/pattern_210.00499194
metacluster_1/pattern_230.013474600000000002
Pattern NameHomerSignificance
motif2.motif0.000685429
Nrf1
Pattern NameModiscoSignificance
metacluster_1/pattern_21.4880100000000003e-06
Pattern NameHomerSignificance
motif6.motif6.827149999999999e-05
Taf1
Pattern NameModiscoSignificance
metacluster_1/pattern_40.030238900000000003
metacluster_1/pattern_84.28641e-06
Pattern NameHomerSignificance
motif15.motif0.00011041200000000001
Elf5
Pattern NameModiscoSignificance
metacluster_1/pattern_40.026316500000000003
Pattern NameHomerSignificance
motif5.motif0.00611149
Nfya
Pattern NameModiscoSignificance
metacluster_1/pattern_35.59777e-06
Pattern NameHomerSignificance
motif4.motif8.93288e-07
Etv3
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00192709
Pattern NameHomerSignificance
motif5.motif0.00332505
Creb5
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00132816
Pattern NameHomerSignificance
motif7.motif0.044163
Sp2
Pattern NameModiscoSignificance
metacluster_1/pattern_15.485059999999999e-16
metacluster_1/pattern_20.0346779
metacluster_1/pattern_44.1090299999999995e-05
metacluster_1/pattern_50.0322934
metacluster_1/pattern_85.49554e-05
metacluster_1/pattern_91.15728e-11
metacluster_1/pattern_121.4043900000000001e-05
metacluster_1/pattern_130.000340311
metacluster_1/pattern_156.98135e-06
metacluster_1/pattern_163.31717e-08
metacluster_1/pattern_182.27781e-09
metacluster_1/pattern_190.00567677
metacluster_1/pattern_215.9136e-09
metacluster_1/pattern_231.16256e-06
Pattern NameHomerSignificance
motif2.motif0.000138767
Ctcfl
Pattern NameModiscoSignificance
metacluster_1/pattern_06.41926e-12
metacluster_1/pattern_40.057717399999999995
metacluster_1/pattern_80.0590043
metacluster_1/pattern_90.00893833
metacluster_1/pattern_150.044941800000000004
metacluster_1/pattern_160.00333613
metacluster_1/pattern_180.0183279
metacluster_1/pattern_210.0152549
metacluster_1/pattern_230.00492566
Pattern NameHomerSignificance
motif1.motif0.010121999999999999
motif16.motif0.0311589
Klf7
Pattern NameModiscoSignificance
metacluster_1/pattern_10.0022735
metacluster_1/pattern_91.2825299999999999e-05
Pattern NameHomerSignificance
motif2.motif0.0005179259999999999
Ets1
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00063933
Pattern NameHomerSignificance
motif5.motif0.00807262
Crem
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00586942
Pattern NameHomerSignificance
motif7.motif0.026458
Xbp1
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0382048
Pattern NameHomerSignificance
motif7.motif0.0501344
Creb1
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00132816
metacluster_1/pattern_110.0568165
Pattern NameHomerSignificance
motif7.motif0.03744430000000001
Zfp42
Pattern NameModiscoSignificance
metacluster_1/pattern_80.011373600000000001
Pattern NameHomerSignificance
motif15.motif0.00397466
Sp3
Pattern NameModiscoSignificance
metacluster_1/pattern_18.17508e-11
metacluster_1/pattern_40.00063933
metacluster_1/pattern_80.0007347189999999999
metacluster_1/pattern_93.51979e-09
metacluster_1/pattern_125.83515e-05
metacluster_1/pattern_130.0019458
metacluster_1/pattern_150.000289807
metacluster_1/pattern_164.8295999999999995e-06
metacluster_1/pattern_186.827380000000001e-08
metacluster_1/pattern_190.027767
metacluster_1/pattern_212.01028e-07
metacluster_1/pattern_238.591839999999999e-06
Pattern NameHomerSignificance
motif2.motif0.000155143
Unique TF-MoDISco TFs: #65
TF NameModiscoHomer
Myc
Pattern NameModiscoSignificance
metacluster_1/pattern_40.027544700000000002
metacluster_1/pattern_110.0193157
Absent
Sox2
Pattern NameModiscoSignificance
metacluster_1/pattern_67.89077e-05
Absent
Max
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00661815
Absent
Pou2f2
Pattern NameModiscoSignificance
metacluster_1/pattern_220.00409383
Absent
Arnt
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0348608
Absent
Mxi1
Pattern NameModiscoSignificance
metacluster_1/pattern_40.000576479
metacluster_1/pattern_90.0275409
metacluster_1/pattern_130.0152329
metacluster_1/pattern_160.00525048
metacluster_1/pattern_180.0135202
metacluster_1/pattern_210.00554773
metacluster_1/pattern_230.00492566
Absent
Klf15
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00481916
metacluster_1/pattern_90.000643832
metacluster_1/pattern_120.000174686
metacluster_1/pattern_180.0266697
metacluster_1/pattern_210.0306688
metacluster_1/pattern_230.0123416
Absent
Tfap2a
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0426438
Absent
Nfib
Pattern NameModiscoSignificance
metacluster_1/pattern_105.00941e-07
Absent
Bhlhe41
Pattern NameModiscoSignificance
metacluster_1/pattern_110.019958700000000003
Absent
Irf2
Pattern NameModiscoSignificance
metacluster_1/pattern_200.0011244999999999998
Absent
Rfx6
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00789477
metacluster_1/pattern_190.018834299999999998
Absent
Usf2
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00195156
metacluster_1/pattern_56.25427e-06
metacluster_1/pattern_90.0147304
metacluster_1/pattern_110.00254842
metacluster_1/pattern_130.0165635
metacluster_1/pattern_150.0513349
metacluster_1/pattern_160.004051699999999999
metacluster_1/pattern_180.00480887
metacluster_1/pattern_190.027433199999999998
metacluster_1/pattern_210.000277944
metacluster_1/pattern_230.00492566
Absent
Fosl1
Pattern NameModiscoSignificance
metacluster_1/pattern_50.0278211
Absent
Sox17
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00858338
Absent
Fosl2
Pattern NameModiscoSignificance
metacluster_1/pattern_50.00597178
Absent
Prdm1
Pattern NameModiscoSignificance
metacluster_1/pattern_200.00021962
Absent
Sox6
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00290416
Absent
Zfp740
Pattern NameModiscoSignificance
metacluster_1/pattern_90.016183000000000003
Absent
Zbtb17
Pattern NameModiscoSignificance
metacluster_1/pattern_10.000869705
metacluster_1/pattern_40.00690433
metacluster_1/pattern_80.011181299999999998
metacluster_1/pattern_90.000333796
metacluster_1/pattern_120.00289972
metacluster_1/pattern_150.030108
metacluster_1/pattern_160.00493958
metacluster_1/pattern_180.00215665
metacluster_1/pattern_210.00151641
metacluster_1/pattern_230.00570346
Absent
Npas2
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00373608
Absent
Dbp
Pattern NameModiscoSignificance
metacluster_1/pattern_50.0531899
Absent
Pou2f1
Pattern NameModiscoSignificance
metacluster_1/pattern_220.031815699999999995
Absent
Sox9
Pattern NameModiscoSignificance
metacluster_1/pattern_63.77461e-13
Absent
Batf3
Pattern NameModiscoSignificance
metacluster_1/pattern_200.0113863
Absent
Stat1
Pattern NameModiscoSignificance
metacluster_1/pattern_200.00514843
Absent
Etv2
Pattern NameModiscoSignificance
metacluster_1/pattern_40.00191973
Absent
Mlxip
Pattern NameModiscoSignificance
metacluster_1/pattern_110.048001199999999994
Absent
Tfap2b
Pattern NameModiscoSignificance
metacluster_1/pattern_160.020047099999999998
Absent
Egr3
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0426438
metacluster_1/pattern_210.045418900000000005
Absent
Creb3l2
Pattern NameModiscoSignificance
metacluster_1/pattern_110.024305
Absent
Rfx3
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00612929
metacluster_1/pattern_190.00334269
Absent
Tef
Pattern NameModiscoSignificance
metacluster_1/pattern_50.028951599999999997
Absent
Irf4
Pattern NameModiscoSignificance
metacluster_1/pattern_200.00520317
Absent
Sox4
Pattern NameModiscoSignificance
metacluster_1/pattern_60.0183864
Absent
Tfap2c
Pattern NameModiscoSignificance
metacluster_1/pattern_90.03918169999999999
Absent
Stat2
Pattern NameModiscoSignificance
metacluster_1/pattern_200.00142978
Absent
Ptf1a
Pattern NameModiscoSignificance
metacluster_1/pattern_10.027826
metacluster_1/pattern_120.0208459
Absent
Nfil3
Pattern NameModiscoSignificance
metacluster_1/pattern_50.0210715
Absent
Jun
Pattern NameModiscoSignificance
metacluster_1/pattern_50.0165623
Absent
Irf8
Pattern NameModiscoSignificance
metacluster_1/pattern_200.00010378799999999999
Absent
Irf7
Pattern NameModiscoSignificance
metacluster_1/pattern_207.73583e-05
Absent
Hlf
Pattern NameModiscoSignificance
metacluster_1/pattern_50.015381
metacluster_1/pattern_110.0346708
Absent
Tcfl5
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0112368
Absent
Nfia
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0009396680000000001
Absent
Mycn
Pattern NameModiscoSignificance
metacluster_1/pattern_110.05737040000000001
Absent
Rfx7
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00246247
metacluster_1/pattern_190.018834299999999998
Absent
Irf9
Pattern NameModiscoSignificance
metacluster_1/pattern_200.00142978
Absent
Rfx2
Pattern NameModiscoSignificance
metacluster_1/pattern_141.2242899999999999e-08
metacluster_1/pattern_191.9770499999999998e-07
Absent
Maz
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00100291
metacluster_1/pattern_40.0260055
metacluster_1/pattern_80.047138099999999995
metacluster_1/pattern_92.9889e-05
metacluster_1/pattern_120.000267839
metacluster_1/pattern_160.040615
metacluster_1/pattern_180.0242472
metacluster_1/pattern_230.0492413
Absent
Egr2
Pattern NameModiscoSignificance
metacluster_1/pattern_10.00882433
metacluster_1/pattern_80.05432669999999999
metacluster_1/pattern_90.025959500000000003
metacluster_1/pattern_120.0530179
metacluster_1/pattern_210.0128259
Absent
Nfic
Pattern NameModiscoSignificance
metacluster_1/pattern_100.0164728
Absent
Irf3
Pattern NameModiscoSignificance
metacluster_1/pattern_200.0010777999999999999
Absent
Sox10
Pattern NameModiscoSignificance
metacluster_1/pattern_64.03698e-05
Absent
Rfx4
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0005571780000000001
Absent
Sox3
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00680862
Absent
Wt1
Pattern NameModiscoSignificance
metacluster_1/pattern_10.000140708
metacluster_1/pattern_40.0243355
metacluster_1/pattern_80.035386400000000005
metacluster_1/pattern_91.2825299999999999e-05
metacluster_1/pattern_120.000267839
metacluster_1/pattern_150.0560572
metacluster_1/pattern_160.00651208
metacluster_1/pattern_180.00382261
metacluster_1/pattern_210.00412936
metacluster_1/pattern_230.0119538
Absent
Zfp281
Pattern NameModiscoSignificance
metacluster_1/pattern_10.000973777
metacluster_1/pattern_90.028246299999999995
metacluster_1/pattern_120.0347473
metacluster_1/pattern_180.0458043
metacluster_1/pattern_210.0363905
Absent
Irf1
Pattern NameModiscoSignificance
metacluster_1/pattern_201.0815700000000001e-08
Absent
Spib
Pattern NameModiscoSignificance
metacluster_1/pattern_200.016273
Absent
Nr1h4
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0128921
metacluster_1/pattern_90.026189599999999997
Absent
Spi1
Pattern NameModiscoSignificance
metacluster_1/pattern_40.0298661
Absent
Rfx1
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0401325
metacluster_1/pattern_90.0313519
metacluster_1/pattern_142.82534e-10
metacluster_1/pattern_150.0128936
metacluster_1/pattern_160.00651208
metacluster_1/pattern_180.0229532
metacluster_1/pattern_190.018834299999999998
metacluster_1/pattern_210.00515917
metacluster_1/pattern_230.0110008
Absent
Sp5
Pattern NameModiscoSignificance
metacluster_1/pattern_10.000617845
metacluster_1/pattern_40.026229000000000002
metacluster_1/pattern_94.6303800000000005e-07
metacluster_1/pattern_120.00119571
metacluster_1/pattern_180.057501300000000005
metacluster_1/pattern_230.0123416
Absent
Atf3
Pattern NameModiscoSignificance
metacluster_1/pattern_50.0047956000000000006
Absent
Unique Homer TFs: #2
TF NameModiscoHomer
Zbtb1Absent
Pattern NameHomerSignificance
motif2.motif0.05770700000000001
RxrbAbsent
Pattern NameHomerSignificance
motif7.motif0.023284400000000004