In [1]:
# Parameters
data_name = "proB;A;CL"
modisco_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_modisco2019"
tomtom_report_root = "http://mitra.stanford.edu/kundaje/msharmin/report/tomtom_outs/cells"
task_dir = "task_5-naivegw"
perf_file = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/fineFactorized/task_5-naivegw/NaiveauPRC.txt"
homer_root = "/srv/scratch/msharmin/mouse_hem/with_tfd/full_mouse50/Naive_scans"
reportfile = "/mnt/lab_data/kundaje/msharmin/annotations/filtering samples_MS2.xlsx"
sheetname = "filter23"
In [2]:
from matlas.reports import display_metadata
load data from labcluster
Using TensorFlow backend.
2019-08-30 18:41:46,053 [WARNING] git-lfs not installed
In [3]:
display_metadata(data_name, perf_file, reportfile, sheetname)
    Sample Information
    MetaData NameDescription
    Cell typeproB cells
    Cell GroupB cells
    Experiment NameATAC
    Experiment GroupCasellas Lab
    Pipeline Output
    replicateNaïve overlap peaksIDR peaksTSS enrichment (< 8 is very poor <10 is low)Final number of unique mapping, dup-filtered, chrM filtered readsNumber of reads in called peak regionsFraction of reads in called peak regionsNumber of reads in promoter regionsFraction of reads in promoter regionsNumber of reads in enhancer regionsFraction of reads in enhancer regions
    rep1105350741118.7815904035772188210.122361673450.1045195090870.3305
    Modelling Metadata
    MetricValue
    auPRC0.5962
    Calibrated Recall at 50% FDR0.21
    Number of Positive Examples in Test Data74715
    Number of Negative Examples in Test Data7996136
    Imbalance Ratio in Test Data0.0093
    Test Chromosomeschr2, chr3, chr19
In [4]:
from matlas.reports import display_paiwise_pattern_comparison
from matlas.reports import display_denovo_patterns
In [5]:
display_denovo_patterns(data_name, modisco_root=modisco_root)
TF-MoDISco is using the TensorFlow backend.
The following two links show list of Denovo Patterns and corresponding Motifs discovered by TF-MoDISco
Click here for Denovo Patterns by TF-MoDISco: #20
Pattern NameTF Name(s)Modisco
metacluster_1/pattern_0 # seqlets: 6480 SequenceContrib ScoresHyp_Contrib Scores
Spib, Spi1, Irf4, Irf8, Irf3, Elf5, Sp5, Prdm1, Spic, Gabpa,

Etv2, Gata1, Wt1, Elf3, Irf2, Irf1, Maz, Rela, Ets1, Bcl6, Ehf,

Stat2, Klf15, Elk1, Erg, Etv6, Sp1, E2f7, Ets2, Elf1, Stat1, Zscan10,

Etv4, Zbtb17, Irf7, Elf4, Fli1, Etv3, Elf2, Mxi1, Elk3, Zfp740, XP_911724.4,

E2f1
metacluster_1/pattern_1 # seqlets: 3507 SequenceContrib ScoresHyp_Contrib Scores
Ctcf, Ctcfl
metacluster_1/pattern_2 # seqlets: 2887 SequenceContrib ScoresHyp_Contrib Scores
Sp2, Sp3, Sp4, Klf3, E2f4, Klf6, Klf4, Egr1, Klf7, Klf5,

Klf8, Klf12, Egr2, Klf1, Zfp281, Egr3
metacluster_1/pattern_3 # seqlets: 1628 SequenceContrib ScoresHyp_Contrib Scores
Ascl2, Tcf3, Ptf1a, Ascl1, Myog, Myod1, Myf5, Tcf7l1, Bhlha15, Tcf12,

Myf6, Tcf4, Tal1, Nhlh2, Tcf21, Atoh1, Olig2, Lyl1, Tgif1, Meis3, Snai2,

Pknox2, Meis2, Figla, Neurod2, Nhlh1, Neurod1, Neurog2, Snai1, Hes5, Twist1
metacluster_1/pattern_4 # seqlets: 1485 SequenceContrib ScoresHyp_Contrib Scores
Nfyb, Foxi1, Nfyc, Nfya, Pbx3
metacluster_1/pattern_5 # seqlets: 1099 SequenceContrib ScoresHyp_Contrib Scores
Nrf1
metacluster_1/pattern_6 # seqlets: 973 SequenceContrib ScoresHyp_Contrib Scores
Taf1, Yy1, Zfx, Zfp42, Rfx1
metacluster_1/pattern_7 # seqlets: 965 SequenceContrib ScoresHyp_Contrib Scores
Runx1, Runx2, Runx3, Cbfb, Gfi1b
metacluster_1/pattern_8 # seqlets: 954 SequenceContrib ScoresHyp_Contrib Scores
Creb1, Atf2, Crem, Usf2, Jdp2, Atf7, Atf1, Creb5, Atf3, Fosl2,

Jun
metacluster_1/pattern_9 # seqlets: 905 SequenceContrib ScoresHyp_Contrib Scores
Hes7, Hes1
metacluster_1/pattern_10 # seqlets: 716 SequenceContrib ScoresHyp_Contrib Scores
Zfp143, Thap11, Tbx2
metacluster_1/pattern_11 # seqlets: 659 SequenceContrib ScoresHyp_Contrib Scores
Gata6, Gata5, Gata4, Gata2, Gata3
metacluster_1/pattern_12 # seqlets: 574 SequenceContrib ScoresHyp_Contrib Scores
Usf1, Tfe3, Tfeb, Arntl, Tfec, Mitf, Clock, Bhlhe40, Srebf1, Arnt,

Mlx, Npas2, Srebf2, Creb3l2, Tcfl5, Mycn, Max, Myc, Bhlhe41, Hlf, Rarg,

Xbp1
metacluster_1/pattern_13 # seqlets: 430 SequenceContrib ScoresHyp_Contrib Scores
Rfx3, Rfx2, Rfx4, Rfx6, Rfx7
metacluster_1/pattern_14 # seqlets: 357 SequenceContrib ScoresHyp_Contrib Scores
Bach2, Nfe2l2, Nfe2, Bach1, Fosl1, Jund, Fos, Fosb, Junb, Mafk,

Batf, Mafa, Mafg, Mafb, Maf, Maff
metacluster_1/pattern_15 # seqlets: 217 SequenceContrib ScoresHyp_Contrib Scores
metacluster_1/pattern_16 # seqlets: 177 SequenceContrib ScoresHyp_Contrib Scores
Zbtb33
metacluster_1/pattern_17 # seqlets: 107 SequenceContrib ScoresHyp_Contrib Scores
Nfia, Zfp322a, Nfib, Nfic
metacluster_1/pattern_18 # seqlets: 69 SequenceContrib ScoresHyp_Contrib Scores
Ebf1, Prdm16
metacluster_1/pattern_19 # seqlets: 53 SequenceContrib ScoresHyp_Contrib Scores
Pou2f2
Click here for Motifs by TF-MoDISco: #181
TF NamePattern(s)
Spib
Pattern NameModiscoSignificance
metacluster_1/pattern_06.30728e-08
Spi1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000314473
Irf4
Pattern NameModiscoSignificance
metacluster_1/pattern_01.02748e-06
Irf8
Pattern NameModiscoSignificance
metacluster_1/pattern_03.36543e-05
Irf3
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000163049
Elf5
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0581164
Sp5
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000427715
metacluster_1/pattern_20.00109055
Prdm1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00043032199999999996
Spic
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00241231
Gabpa
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0353863
Etv2
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00122219
Gata1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00162929
metacluster_1/pattern_110.00730141
Wt1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00180062
metacluster_1/pattern_20.00307874
metacluster_1/pattern_60.027869599999999998
Elf3
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0353863
Irf2
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00266946
Irf1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0031194000000000005
Maz
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00330052
metacluster_1/pattern_20.00971558
metacluster_1/pattern_60.050106599999999994
Rela
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00346707
Ets1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.031648
Bcl6
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0046073
Ehf
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00476034
Stat2
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00602768
Klf15
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0075435
metacluster_1/pattern_20.0337213
Elk1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0343393
Erg
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0353863
Etv6
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0339876
Sp1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0132864
metacluster_1/pattern_20.00123998
metacluster_1/pattern_60.000204219
metacluster_1/pattern_90.00447706
metacluster_1/pattern_160.014922999999999999
E2f7
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0135619
Ets2
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0142324
Elf1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0149661
Stat1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0194126
Zscan10
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0194126
Etv4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0196032
Zbtb17
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0228187
metacluster_1/pattern_20.00163282
metacluster_1/pattern_60.017299099999999998
Irf7
Pattern NameModiscoSignificance
metacluster_1/pattern_00.024036099999999998
Elf4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0297355
Fli1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0353863
Etv3
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0336779
Elf2
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0343393
Mxi1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0353863
metacluster_1/pattern_60.0476984
Elk3
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0353863
Zfp740
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0402295
XP_911724.4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0377337
E2f1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.056875800000000004
metacluster_1/pattern_20.019514700000000003
Ctcf
Pattern NameModiscoSignificance
metacluster_1/pattern_11.1375999999999999e-13
Ctcfl
Pattern NameModiscoSignificance
metacluster_1/pattern_17.79888e-08
Sp2
Pattern NameModiscoSignificance
metacluster_1/pattern_22.53537e-09
metacluster_1/pattern_67.21175e-05
metacluster_1/pattern_90.000783741
metacluster_1/pattern_160.00226456
Sp3
Pattern NameModiscoSignificance
metacluster_1/pattern_27.95354e-08
metacluster_1/pattern_60.000592367
metacluster_1/pattern_90.000837537
metacluster_1/pattern_160.0139851
Sp4
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00163282
metacluster_1/pattern_60.055
metacluster_1/pattern_90.0128561
Klf3
Pattern NameModiscoSignificance
metacluster_1/pattern_22.49175e-07
metacluster_1/pattern_60.027869599999999998
metacluster_1/pattern_90.000590719
E2f4
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00031912900000000003
metacluster_1/pattern_90.00841514
Klf6
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00031912900000000003
metacluster_1/pattern_90.00363702
Klf4
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00179203
metacluster_1/pattern_90.00406506
Egr1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.026078399999999998
metacluster_1/pattern_90.041899599999999995
Klf7
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00153737
metacluster_1/pattern_90.000590719
Klf5
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00153737
Klf8
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00271726
metacluster_1/pattern_90.000590719
Klf12
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00307874
metacluster_1/pattern_90.000783741
Egr2
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00439483
Klf1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.038730400000000005
metacluster_1/pattern_90.00364343
Zfp281
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0108251
metacluster_1/pattern_90.0137387
Egr3
Pattern NameModiscoSignificance
metacluster_1/pattern_20.05713769999999999
Ascl2
Pattern NameModiscoSignificance
metacluster_1/pattern_30.00020194900000000001
Tcf3
Pattern NameModiscoSignificance
metacluster_1/pattern_30.00191383
Ptf1a
Pattern NameModiscoSignificance
metacluster_1/pattern_30.000800444
Ascl1
Pattern NameModiscoSignificance
metacluster_1/pattern_30.00386494
Myog
Pattern NameModiscoSignificance
metacluster_1/pattern_30.00177886
Myod1
Pattern NameModiscoSignificance
metacluster_1/pattern_30.000629704
Myf5
Pattern NameModiscoSignificance
metacluster_1/pattern_30.000355754
Tcf7l1
Pattern NameModiscoSignificance
metacluster_1/pattern_30.000355754
Bhlha15
Pattern NameModiscoSignificance
metacluster_1/pattern_30.000668353
Tcf12
Pattern NameModiscoSignificance
metacluster_1/pattern_30.021928200000000002
Myf6
Pattern NameModiscoSignificance
metacluster_1/pattern_30.0206748
Tcf4
Pattern NameModiscoSignificance
metacluster_1/pattern_30.00207037
Tal1
Pattern NameModiscoSignificance
metacluster_1/pattern_30.042013199999999994
metacluster_1/pattern_111.05185e-05
Nhlh2
Pattern NameModiscoSignificance
metacluster_1/pattern_30.00317823
Tcf21
Pattern NameModiscoSignificance
metacluster_1/pattern_30.00365131
Atoh1
Pattern NameModiscoSignificance
metacluster_1/pattern_30.00637636
Olig2
Pattern NameModiscoSignificance
metacluster_1/pattern_30.0284428
Lyl1
Pattern NameModiscoSignificance
metacluster_1/pattern_30.00549987
Tgif1
Pattern NameModiscoSignificance
metacluster_1/pattern_30.00637636
Meis3
Pattern NameModiscoSignificance
metacluster_1/pattern_30.00793162
Snai2
Pattern NameModiscoSignificance
metacluster_1/pattern_30.00793162
Pknox2
Pattern NameModiscoSignificance
metacluster_1/pattern_30.00930468
Meis2
Pattern NameModiscoSignificance
metacluster_1/pattern_30.016496
Figla
Pattern NameModiscoSignificance
metacluster_1/pattern_30.017353999999999998
Neurod2
Pattern NameModiscoSignificance
metacluster_1/pattern_30.0183299
Nhlh1
Pattern NameModiscoSignificance
metacluster_1/pattern_30.020959099999999998
Neurod1
Pattern NameModiscoSignificance
metacluster_1/pattern_30.0249628
Neurog2
Pattern NameModiscoSignificance
metacluster_1/pattern_30.022481
Snai1
Pattern NameModiscoSignificance
metacluster_1/pattern_30.0244199
Hes5
Pattern NameModiscoSignificance
metacluster_1/pattern_30.0515431
Twist1
Pattern NameModiscoSignificance
metacluster_1/pattern_30.05686889999999999
Nfyb
Pattern NameModiscoSignificance
metacluster_1/pattern_44.46369e-09
Foxi1
Pattern NameModiscoSignificance
metacluster_1/pattern_45.2542099999999995e-06
Nfyc
Pattern NameModiscoSignificance
metacluster_1/pattern_45.2542099999999995e-06
Nfya
Pattern NameModiscoSignificance
metacluster_1/pattern_45.2542099999999995e-06
Pbx3
Pattern NameModiscoSignificance
metacluster_1/pattern_40.000180544
Nrf1
Pattern NameModiscoSignificance
metacluster_1/pattern_52.35125e-09
Taf1
Pattern NameModiscoSignificance
metacluster_1/pattern_64.2432499999999996e-06
Yy1
Pattern NameModiscoSignificance
metacluster_1/pattern_61.11523e-05
Zfx
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00376621
metacluster_1/pattern_80.049174300000000004
metacluster_1/pattern_160.00683978
Zfp42
Pattern NameModiscoSignificance
metacluster_1/pattern_60.010586
Rfx1
Pattern NameModiscoSignificance
metacluster_1/pattern_60.017299099999999998
metacluster_1/pattern_131.85292e-09
Runx1
Pattern NameModiscoSignificance
metacluster_1/pattern_72.7216100000000002e-05
Runx2
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0118791
Runx3
Pattern NameModiscoSignificance
metacluster_1/pattern_70.000320952
Cbfb
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0009160069999999999
Gfi1b
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0297553
Creb1
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00364593
metacluster_1/pattern_120.0316908
Atf2
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00364593
Crem
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0267038
Usf2
Pattern NameModiscoSignificance
metacluster_1/pattern_80.000812388
metacluster_1/pattern_120.00643999
Jdp2
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00364593
metacluster_1/pattern_140.00781145
Atf7
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00131549
metacluster_1/pattern_120.038168400000000005
Atf1
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0256714
metacluster_1/pattern_120.028735200000000002
Creb5
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00365
Atf3
Pattern NameModiscoSignificance
metacluster_1/pattern_80.018809299999999998
metacluster_1/pattern_140.000349256
Fosl2
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0267038
metacluster_1/pattern_140.000679098
Jun
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0471364
metacluster_1/pattern_142.69805e-05
Hes7
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0426829
Hes1
Pattern NameModiscoSignificance
metacluster_1/pattern_90.048633800000000005
metacluster_1/pattern_120.0599783
Zfp143
Pattern NameModiscoSignificance
metacluster_1/pattern_103.1698799999999997e-22
Thap11
Pattern NameModiscoSignificance
metacluster_1/pattern_104.03167e-21
Tbx2
Pattern NameModiscoSignificance
metacluster_1/pattern_106.28668e-14
Gata6
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00317446
Gata5
Pattern NameModiscoSignificance
metacluster_1/pattern_110.000189745
Gata4
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0165072
Gata2
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00600526
Gata3
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0327449
Usf1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0126333
Tfe3
Pattern NameModiscoSignificance
metacluster_1/pattern_120.000507828
Tfeb
Pattern NameModiscoSignificance
metacluster_1/pattern_120.000163668
Arntl
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00650853
Tfec
Pattern NameModiscoSignificance
metacluster_1/pattern_120.000507828
Mitf
Pattern NameModiscoSignificance
metacluster_1/pattern_120.000295592
Clock
Pattern NameModiscoSignificance
metacluster_1/pattern_120.010813799999999998
Bhlhe40
Pattern NameModiscoSignificance
metacluster_1/pattern_120.013515899999999999
Srebf1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.030530900000000003
Arnt
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0501763
Mlx
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00585642
Npas2
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00176038
Srebf2
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00663596
Creb3l2
Pattern NameModiscoSignificance
metacluster_1/pattern_120.013515899999999999
Tcfl5
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00876447
Mycn
Pattern NameModiscoSignificance
metacluster_1/pattern_120.011502799999999999
Max
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0129089
Myc
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0207011
Bhlhe41
Pattern NameModiscoSignificance
metacluster_1/pattern_120.023532400000000002
Hlf
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0440821
Rarg
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0473947
Xbp1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0581296
Rfx3
Pattern NameModiscoSignificance
metacluster_1/pattern_130.00246955
Rfx2
Pattern NameModiscoSignificance
metacluster_1/pattern_136.35331e-08
Rfx4
Pattern NameModiscoSignificance
metacluster_1/pattern_130.00021360400000000002
Rfx6
Pattern NameModiscoSignificance
metacluster_1/pattern_130.000499193
Rfx7
Pattern NameModiscoSignificance
metacluster_1/pattern_130.00124885
Bach2
Pattern NameModiscoSignificance
metacluster_1/pattern_142.22112e-06
Nfe2l2
Pattern NameModiscoSignificance
metacluster_1/pattern_142.69805e-05
Nfe2
Pattern NameModiscoSignificance
metacluster_1/pattern_142.69805e-05
Bach1
Pattern NameModiscoSignificance
metacluster_1/pattern_142.69805e-05
Fosl1
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00016344799999999998
Jund
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0496321
Fos
Pattern NameModiscoSignificance
metacluster_1/pattern_140.000349256
Fosb
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0007760110000000001
Junb
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0007760110000000001
Mafk
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00191738
Batf
Pattern NameModiscoSignificance
metacluster_1/pattern_140.017144
Mafa
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00387796
Mafg
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00492515
Mafb
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00781145
Maf
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00674799
Maff
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00674799
Zbtb33
Pattern NameModiscoSignificance
metacluster_1/pattern_168.7466e-05
Nfia
Pattern NameModiscoSignificance
metacluster_1/pattern_177.81543e-06
Zfp322a
Pattern NameModiscoSignificance
metacluster_1/pattern_170.0025896
Nfib
Pattern NameModiscoSignificance
metacluster_1/pattern_170.0025896
Nfic
Pattern NameModiscoSignificance
metacluster_1/pattern_170.0376804
Ebf1
Pattern NameModiscoSignificance
metacluster_1/pattern_180.00203024
Prdm16
Pattern NameModiscoSignificance
metacluster_1/pattern_180.00171219
Pou2f2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.00965748
In [6]:
display_paiwise_pattern_comparison(data_name, modisco_root, homer_root)
Number of CISBP TFs obtained by TF-MoDISco and Homer
Shared TFs between TF-MoDISco and Homer: #75
TF NameModiscoHomer
Elk3
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0353863
Pattern NameHomerSignificance
motif3.motif0.000320533
Elf5
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0581164
Pattern NameHomerSignificance
motif3.motif0.024824000000000002
Spi1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000314473
Pattern NameHomerSignificance
motif3.motif0.00036884699999999995
Irf8
Pattern NameModiscoSignificance
metacluster_1/pattern_03.36543e-05
Pattern NameHomerSignificance
motif3.motif0.000240226
Tbx2
Pattern NameModiscoSignificance
metacluster_1/pattern_106.28668e-14
Pattern NameHomerSignificance
motif4.motif4.46536e-06
Nfya
Pattern NameModiscoSignificance
metacluster_1/pattern_45.2542099999999995e-06
Pattern NameHomerSignificance
motif11.motif0.000159104
Myog
Pattern NameModiscoSignificance
metacluster_1/pattern_30.00177886
Pattern NameHomerSignificance
motif15.motif0.0590737
Ascl1
Pattern NameModiscoSignificance
metacluster_1/pattern_30.00386494
Pattern NameHomerSignificance
motif15.motif0.0447655
Klf7
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00153737
metacluster_1/pattern_90.000590719
Pattern NameHomerSignificance
motif2.motif0.00102051
E2f1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.056875800000000004
metacluster_1/pattern_20.019514700000000003
Pattern NameHomerSignificance
motif2.motif0.0407081
Elf4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0297355
Pattern NameHomerSignificance
motif3.motif0.00052421
Tcf21
Pattern NameModiscoSignificance
metacluster_1/pattern_30.00365131
Pattern NameHomerSignificance
motif15.motif0.027501799999999996
Ptf1a
Pattern NameModiscoSignificance
metacluster_1/pattern_30.000800444
Pattern NameHomerSignificance
motif15.motif0.0112068
XP_911724.4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0377337
Pattern NameHomerSignificance
motif3.motif0.000314467
Sp3
Pattern NameModiscoSignificance
metacluster_1/pattern_27.95354e-08
metacluster_1/pattern_60.000592367
metacluster_1/pattern_90.000837537
metacluster_1/pattern_160.0139851
Pattern NameHomerSignificance
motif2.motif6.86395e-05
Ets1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.031648
Pattern NameHomerSignificance
motif3.motif0.00021172099999999997
Yy1
Pattern NameModiscoSignificance
metacluster_1/pattern_61.11523e-05
Pattern NameHomerSignificance
motif14.motif0.00138731
Elf3
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0353863
Pattern NameHomerSignificance
motif3.motif0.00935886
Sp2
Pattern NameModiscoSignificance
metacluster_1/pattern_22.53537e-09
metacluster_1/pattern_67.21175e-05
metacluster_1/pattern_90.000783741
metacluster_1/pattern_160.00226456
Pattern NameHomerSignificance
motif2.motif5.19794e-06
Irf2
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00266946
Pattern NameHomerSignificance
motif3.motif0.00988637
Ctcf
Pattern NameModiscoSignificance
metacluster_1/pattern_11.1375999999999999e-13
Pattern NameHomerSignificance
motif1.motif7.040939999999999e-06
Elk1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0343393
Pattern NameHomerSignificance
motif3.motif0.000265148
Irf4
Pattern NameModiscoSignificance
metacluster_1/pattern_01.02748e-06
Pattern NameHomerSignificance
motif3.motif0.000265148
Zfp143
Pattern NameModiscoSignificance
metacluster_1/pattern_103.1698799999999997e-22
Pattern NameHomerSignificance
motif4.motif5.211019999999999e-08
Thap11
Pattern NameModiscoSignificance
metacluster_1/pattern_104.03167e-21
Pattern NameHomerSignificance
motif4.motif7.855680000000001e-08
Elf2
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0343393
Pattern NameHomerSignificance
motif3.motif0.045809699999999995
Spib
Pattern NameModiscoSignificance
metacluster_1/pattern_06.30728e-08
Pattern NameHomerSignificance
motif3.motif7.9322e-05
Foxi1
Pattern NameModiscoSignificance
metacluster_1/pattern_45.2542099999999995e-06
Pattern NameHomerSignificance
motif11.motif0.00770626
Zfp42
Pattern NameModiscoSignificance
metacluster_1/pattern_60.010586
Pattern NameHomerSignificance
motif14.motif0.010092100000000001
Klf8
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00271726
metacluster_1/pattern_90.000590719
Pattern NameHomerSignificance
motif2.motif0.00196248
Meis2
Pattern NameModiscoSignificance
metacluster_1/pattern_30.016496
Pattern NameHomerSignificance
motif15.motif0.014734700000000002
Zbtb17
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0228187
metacluster_1/pattern_20.00163282
metacluster_1/pattern_60.017299099999999998
Pattern NameHomerSignificance
motif2.motif0.024919900000000002
Etv6
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0339876
Pattern NameHomerSignificance
motif3.motif0.00467069
Fli1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0353863
Pattern NameHomerSignificance
motif3.motif0.00027262900000000004
Spic
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00241231
Pattern NameHomerSignificance
motif3.motif0.000447262
Etv3
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0336779
Pattern NameHomerSignificance
motif3.motif0.00027262900000000004
Etv2
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00122219
Pattern NameHomerSignificance
motif3.motif0.000277306
Irf3
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000163049
Pattern NameHomerSignificance
motif3.motif0.012199600000000001
Taf1
Pattern NameModiscoSignificance
metacluster_1/pattern_64.2432499999999996e-06
Pattern NameHomerSignificance
motif14.motif0.0179206
Atoh1
Pattern NameModiscoSignificance
metacluster_1/pattern_30.00637636
Pattern NameHomerSignificance
motif15.motif0.0467884
Lyl1
Pattern NameModiscoSignificance
metacluster_1/pattern_30.00549987
Pattern NameHomerSignificance
motif15.motif0.0523702
Tal1
Pattern NameModiscoSignificance
metacluster_1/pattern_30.042013199999999994
metacluster_1/pattern_111.05185e-05
Pattern NameHomerSignificance
motif15.motif0.014329699999999999
Elf1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0149661
Pattern NameHomerSignificance
motif3.motif0.000212303
Nhlh2
Pattern NameModiscoSignificance
metacluster_1/pattern_30.00317823
Pattern NameHomerSignificance
motif15.motif0.0523702
Nrf1
Pattern NameModiscoSignificance
metacluster_1/pattern_52.35125e-09
Pattern NameHomerSignificance
motif10.motif0.000372712
Gabpa
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0353863
Pattern NameHomerSignificance
motif3.motif0.002793
Irf1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0031194000000000005
Pattern NameHomerSignificance
motif3.motif0.015576300000000001
Tcf12
Pattern NameModiscoSignificance
metacluster_1/pattern_30.021928200000000002
Pattern NameHomerSignificance
motif15.motif0.0457243
Nfyb
Pattern NameModiscoSignificance
metacluster_1/pattern_44.46369e-09
Pattern NameHomerSignificance
motif11.motif0.000159104
Myf6
Pattern NameModiscoSignificance
metacluster_1/pattern_30.0206748
Pattern NameHomerSignificance
motif15.motif0.0523702
Etv4
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0196032
Pattern NameHomerSignificance
motif3.motif0.00146031
Nfyc
Pattern NameModiscoSignificance
metacluster_1/pattern_45.2542099999999995e-06
Pattern NameHomerSignificance
motif11.motif0.000579732
Klf6
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00031912900000000003
metacluster_1/pattern_90.00363702
Pattern NameHomerSignificance
motif2.motif6.86395e-05
Klf1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.038730400000000005
metacluster_1/pattern_90.00364343
Pattern NameHomerSignificance
motif2.motif0.024919900000000002
Ehf
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00476034
Pattern NameHomerSignificance
motif3.motif0.00306379
Prdm1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00043032199999999996
Pattern NameHomerSignificance
motif3.motif0.00815126
Klf4
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00179203
metacluster_1/pattern_90.00406506
Pattern NameHomerSignificance
motif2.motif0.00163369
Sp4
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00163282
metacluster_1/pattern_60.055
metacluster_1/pattern_90.0128561
Pattern NameHomerSignificance
motif2.motif0.029510400000000003
Meis3
Pattern NameModiscoSignificance
metacluster_1/pattern_30.00793162
Pattern NameHomerSignificance
motif15.motif0.013919399999999998
Klf12
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00307874
metacluster_1/pattern_90.000783741
Pattern NameHomerSignificance
motif2.motif0.024919900000000002
Sp1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0132864
metacluster_1/pattern_20.00123998
metacluster_1/pattern_60.000204219
metacluster_1/pattern_90.00447706
metacluster_1/pattern_160.014922999999999999
Pattern NameHomerSignificance
motif2.motif0.00747466
Myf5
Pattern NameModiscoSignificance
metacluster_1/pattern_30.000355754
Pattern NameHomerSignificance
motif15.motif0.000152309
Klf5
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00153737
Pattern NameHomerSignificance
motif2.motif0.03566230000000001
Klf15
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0075435
metacluster_1/pattern_20.0337213
Pattern NameHomerSignificance
motif2.motif0.036031
Erg
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0353863
Pattern NameHomerSignificance
motif3.motif0.000221317
Ascl2
Pattern NameModiscoSignificance
metacluster_1/pattern_30.00020194900000000001
Pattern NameHomerSignificance
motif15.motif0.0371213
E2f7
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0135619
Pattern NameHomerSignificance
motif2.motif0.029109899999999998
Pbx3
Pattern NameModiscoSignificance
metacluster_1/pattern_40.000180544
Pattern NameHomerSignificance
motif11.motif0.024524900000000002
Pknox2
Pattern NameModiscoSignificance
metacluster_1/pattern_30.00930468
Pattern NameHomerSignificance
motif15.motif0.0142208
Klf3
Pattern NameModiscoSignificance
metacluster_1/pattern_22.49175e-07
metacluster_1/pattern_60.027869599999999998
metacluster_1/pattern_90.000590719
Pattern NameHomerSignificance
motif2.motif5.19794e-06
Egr1
Pattern NameModiscoSignificance
metacluster_1/pattern_20.026078399999999998
metacluster_1/pattern_90.041899599999999995
Pattern NameHomerSignificance
motif2.motif0.0418294
E2f4
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00031912900000000003
metacluster_1/pattern_90.00841514
Pattern NameHomerSignificance
motif2.motif0.00196248
Ctcfl
Pattern NameModiscoSignificance
metacluster_1/pattern_17.79888e-08
Pattern NameHomerSignificance
motif1.motif0.000509401
Tgif1
Pattern NameModiscoSignificance
metacluster_1/pattern_30.00637636
Pattern NameHomerSignificance
motif15.motif0.0112068
Tcf3
Pattern NameModiscoSignificance
metacluster_1/pattern_30.00191383
Pattern NameHomerSignificance
motif15.motif0.0537778
Unique TF-MoDISco TFs: #106
TF NameModiscoHomer
Npas2
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00176038
Absent
Irf7
Pattern NameModiscoSignificance
metacluster_1/pattern_00.024036099999999998
Absent
Gfi1b
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0297553
Absent
Bhlhe41
Pattern NameModiscoSignificance
metacluster_1/pattern_120.023532400000000002
Absent
Gata5
Pattern NameModiscoSignificance
metacluster_1/pattern_110.000189745
Absent
Twist1
Pattern NameModiscoSignificance
metacluster_1/pattern_30.05686889999999999
Absent
Rfx6
Pattern NameModiscoSignificance
metacluster_1/pattern_130.000499193
Absent
Snai1
Pattern NameModiscoSignificance
metacluster_1/pattern_30.0244199
Absent
Runx3
Pattern NameModiscoSignificance
metacluster_1/pattern_70.000320952
Absent
Zfp740
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0402295
Absent
Creb5
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00365
Absent
Maf
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00674799
Absent
Figla
Pattern NameModiscoSignificance
metacluster_1/pattern_30.017353999999999998
Absent
Rarg
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0473947
Absent
Gata2
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00600526
Absent
Prdm16
Pattern NameModiscoSignificance
metacluster_1/pattern_180.00171219
Absent
Mxi1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0353863
metacluster_1/pattern_60.0476984
Absent
Mlx
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00585642
Absent
Bhlha15
Pattern NameModiscoSignificance
metacluster_1/pattern_30.000668353
Absent
Usf2
Pattern NameModiscoSignificance
metacluster_1/pattern_80.000812388
metacluster_1/pattern_120.00643999
Absent
Hes5
Pattern NameModiscoSignificance
metacluster_1/pattern_30.0515431
Absent
Bach2
Pattern NameModiscoSignificance
metacluster_1/pattern_142.22112e-06
Absent
Ebf1
Pattern NameModiscoSignificance
metacluster_1/pattern_180.00203024
Absent
Fosb
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0007760110000000001
Absent
Srebf2
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00663596
Absent
Rfx4
Pattern NameModiscoSignificance
metacluster_1/pattern_130.00021360400000000002
Absent
Tfe3
Pattern NameModiscoSignificance
metacluster_1/pattern_120.000507828
Absent
Max
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0129089
Absent
Rfx3
Pattern NameModiscoSignificance
metacluster_1/pattern_130.00246955
Absent
Jdp2
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00364593
metacluster_1/pattern_140.00781145
Absent
Stat2
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00602768
Absent
Creb1
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00364593
metacluster_1/pattern_120.0316908
Absent
Atf1
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0256714
metacluster_1/pattern_120.028735200000000002
Absent
Atf2
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00364593
Absent
Runx1
Pattern NameModiscoSignificance
metacluster_1/pattern_72.7216100000000002e-05
Absent
Nfic
Pattern NameModiscoSignificance
metacluster_1/pattern_170.0376804
Absent
Rfx2
Pattern NameModiscoSignificance
metacluster_1/pattern_136.35331e-08
Absent
Bcl6
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0046073
Absent
Neurog2
Pattern NameModiscoSignificance
metacluster_1/pattern_30.022481
Absent
Gata3
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0327449
Absent
Usf1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0126333
Absent
Tfec
Pattern NameModiscoSignificance
metacluster_1/pattern_120.000507828
Absent
Nfia
Pattern NameModiscoSignificance
metacluster_1/pattern_177.81543e-06
Absent
Jund
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0496321
Absent
Creb3l2
Pattern NameModiscoSignificance
metacluster_1/pattern_120.013515899999999999
Absent
Maff
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00674799
Absent
Arnt
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0501763
Absent
Neurod1
Pattern NameModiscoSignificance
metacluster_1/pattern_30.0249628
Absent
Mitf
Pattern NameModiscoSignificance
metacluster_1/pattern_120.000295592
Absent
Zfp322a
Pattern NameModiscoSignificance
metacluster_1/pattern_170.0025896
Absent
Maz
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00330052
metacluster_1/pattern_20.00971558
metacluster_1/pattern_60.050106599999999994
Absent
Rfx7
Pattern NameModiscoSignificance
metacluster_1/pattern_130.00124885
Absent
Atf3
Pattern NameModiscoSignificance
metacluster_1/pattern_80.018809299999999998
metacluster_1/pattern_140.000349256
Absent
Nfe2l2
Pattern NameModiscoSignificance
metacluster_1/pattern_142.69805e-05
Absent
Crem
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0267038
Absent
Clock
Pattern NameModiscoSignificance
metacluster_1/pattern_120.010813799999999998
Absent
Hes1
Pattern NameModiscoSignificance
metacluster_1/pattern_90.048633800000000005
metacluster_1/pattern_120.0599783
Absent
Arntl
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00650853
Absent
Fosl2
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0267038
metacluster_1/pattern_140.000679098
Absent
Rfx1
Pattern NameModiscoSignificance
metacluster_1/pattern_60.017299099999999998
metacluster_1/pattern_131.85292e-09
Absent
Myc
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0207011
Absent
Nhlh1
Pattern NameModiscoSignificance
metacluster_1/pattern_30.020959099999999998
Absent
Mafa
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00387796
Absent
Srebf1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.030530900000000003
Absent
Myod1
Pattern NameModiscoSignificance
metacluster_1/pattern_30.000629704
Absent
Zbtb33
Pattern NameModiscoSignificance
metacluster_1/pattern_168.7466e-05
Absent
Runx2
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0118791
Absent
Atf7
Pattern NameModiscoSignificance
metacluster_1/pattern_80.00131549
metacluster_1/pattern_120.038168400000000005
Absent
Pou2f2
Pattern NameModiscoSignificance
metacluster_1/pattern_190.00965748
Absent
Xbp1
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0581296
Absent
Nfib
Pattern NameModiscoSignificance
metacluster_1/pattern_170.0025896
Absent
Zscan10
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0194126
Absent
Tcf4
Pattern NameModiscoSignificance
metacluster_1/pattern_30.00207037
Absent
Junb
Pattern NameModiscoSignificance
metacluster_1/pattern_140.0007760110000000001
Absent
Rela
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00346707
Absent
Snai2
Pattern NameModiscoSignificance
metacluster_1/pattern_30.00793162
Absent
Tfeb
Pattern NameModiscoSignificance
metacluster_1/pattern_120.000163668
Absent
Gata1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00162929
metacluster_1/pattern_110.00730141
Absent
Hes7
Pattern NameModiscoSignificance
metacluster_1/pattern_90.0426829
Absent
Cbfb
Pattern NameModiscoSignificance
metacluster_1/pattern_70.0009160069999999999
Absent
Egr2
Pattern NameModiscoSignificance
metacluster_1/pattern_20.00439483
Absent
Mafk
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00191738
Absent
Bach1
Pattern NameModiscoSignificance
metacluster_1/pattern_142.69805e-05
Absent
Mafg
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00492515
Absent
Olig2
Pattern NameModiscoSignificance
metacluster_1/pattern_30.0284428
Absent
Jun
Pattern NameModiscoSignificance
metacluster_1/pattern_80.0471364
metacluster_1/pattern_142.69805e-05
Absent
Ets2
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0142324
Absent
Bhlhe40
Pattern NameModiscoSignificance
metacluster_1/pattern_120.013515899999999999
Absent
Fos
Pattern NameModiscoSignificance
metacluster_1/pattern_140.000349256
Absent
Gata6
Pattern NameModiscoSignificance
metacluster_1/pattern_110.00317446
Absent
Gata4
Pattern NameModiscoSignificance
metacluster_1/pattern_110.0165072
Absent
Nfe2
Pattern NameModiscoSignificance
metacluster_1/pattern_142.69805e-05
Absent
Fosl1
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00016344799999999998
Absent
Tcf7l1
Pattern NameModiscoSignificance
metacluster_1/pattern_30.000355754
Absent
Wt1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.00180062
metacluster_1/pattern_20.00307874
metacluster_1/pattern_60.027869599999999998
Absent
Neurod2
Pattern NameModiscoSignificance
metacluster_1/pattern_30.0183299
Absent
Mycn
Pattern NameModiscoSignificance
metacluster_1/pattern_120.011502799999999999
Absent
Stat1
Pattern NameModiscoSignificance
metacluster_1/pattern_00.0194126
Absent
Hlf
Pattern NameModiscoSignificance
metacluster_1/pattern_120.0440821
Absent
Tcfl5
Pattern NameModiscoSignificance
metacluster_1/pattern_120.00876447
Absent
Zfx
Pattern NameModiscoSignificance
metacluster_1/pattern_60.00376621
metacluster_1/pattern_80.049174300000000004
metacluster_1/pattern_160.00683978
Absent
Mafb
Pattern NameModiscoSignificance
metacluster_1/pattern_140.00781145
Absent
Batf
Pattern NameModiscoSignificance
metacluster_1/pattern_140.017144
Absent
Zfp281
Pattern NameModiscoSignificance
metacluster_1/pattern_20.0108251
metacluster_1/pattern_90.0137387
Absent
Egr3
Pattern NameModiscoSignificance
metacluster_1/pattern_20.05713769999999999
Absent
Sp5
Pattern NameModiscoSignificance
metacluster_1/pattern_00.000427715
metacluster_1/pattern_20.00109055
Absent
Unique Homer TFs: #8
TF NameModiscoHomer
Zbtb1Absent
Pattern NameHomerSignificance
motif2.motif0.050038900000000004
Tfap4Absent
Pattern NameHomerSignificance
motif15.motif0.0468022
Irf9Absent
Pattern NameHomerSignificance
motif9.motif0.029889099999999995
Etv1Absent
Pattern NameHomerSignificance
motif3.motif0.00037731300000000005
SpdefAbsent
Pattern NameHomerSignificance
motif3.motif0.0222485
Elk4Absent
Pattern NameHomerSignificance
motif3.motif0.000277306
FevAbsent
Pattern NameHomerSignificance
motif3.motif0.00408102
Etv5Absent
Pattern NameHomerSignificance
motif3.motif0.00037731300000000005