MANIFEST.in
README.rst
setup.py
ont_tombo.egg-info/PKG-INFO
ont_tombo.egg-info/SOURCES.txt
ont_tombo.egg-info/dependency_links.txt
ont_tombo.egg-info/entry_points.txt
ont_tombo.egg-info/requires.txt
ont_tombo.egg-info/top_level.txt
tombo/__init__.py
tombo/__main__.py
tombo/_c_dynamic_programming.pyx
tombo/_c_helper.pyx
tombo/_default_parameters.py
tombo/_event_resquiggle.py
tombo/_filter_reads.py
tombo/_option_parsers.py
tombo/_plot_commands.py
tombo/_preprocess.py
tombo/_text_output_commands.py
tombo/_version.py
tombo/resquiggle.py
tombo/tombo_helper.py
tombo/tombo_stats.py
tombo/R_scripts/debugDP.R
tombo/R_scripts/debugFit.R
tombo/R_scripts/debugRawDP.R
tombo/R_scripts/plotGroupComp.R
tombo/R_scripts/plotKmerDist.R
tombo/R_scripts/plotModelComp.R
tombo/R_scripts/plotMotifStats.R
tombo/R_scripts/plotMultiReadCorr.R
tombo/R_scripts/plotPerReadStats.R
tombo/R_scripts/plotROC.R
tombo/R_scripts/plotROCPerRead.R
tombo/R_scripts/plotReadCorr.R
tombo/R_scripts/plotSigMDS.R
tombo/R_scripts/plotSingleRead.R
tombo/R_scripts/plotSingleRun.R
tombo/tombo_models/tombo.DNA.5mC.model
tombo/tombo_models/tombo.DNA.6mA.model
tombo/tombo_models/tombo.DNA.CpG.model
tombo/tombo_models/tombo.DNA.dam.model
tombo/tombo_models/tombo.DNA.dcm.model
tombo/tombo_models/tombo.DNA.model
tombo/tombo_models/tombo.RNA.180mV.model
tombo/tombo_models/tombo.RNA.200mV.model
tombo/tombo_models/tombo.RNA.5mC.model