Index of /kundaje/marinovg/oak/various/programs/picard-tools-1.99

	Name	Last modified	Size	Description
	Parent Directory		-
	AddOrReplaceReadGroups.jar	2013-09-23 18:56	891K
	BamIndexStats.jar	2013-09-23 18:56	890K
	BamToBfq.jar	2013-09-23 18:56	904K
	BuildBamIndex.jar	2013-09-23 18:56	889K
	CalculateHsMetrics.jar	2013-09-23 18:56	959K
	CheckIlluminaDirectory.jar	2013-09-23 18:56	1.0M
	CleanSam.jar	2013-09-23 18:56	895K
	CollectAlignmentSummaryMetrics.jar	2013-09-23 18:56	938K
	CollectGcBiasMetrics.jar	2013-09-23 18:56	923K
	CollectInsertSizeMetrics.jar	2013-09-23 18:56	940K
	CollectMultipleMetrics.jar	2013-09-23 18:56	1.0M
	CollectRnaSeqMetrics.jar	2013-09-23 18:56	1.0M
	CollectTargetedPcrMetrics.jar	2013-09-23 18:56	963K
	CompareSAMs.jar	2013-09-23 18:56	856K
	CreateSequenceDictionary.jar	2013-09-23 18:56	906K
	DownsampleSam.jar	2013-09-23 18:56	891K
	EstimateLibraryComplexity.jar	2013-09-23 18:56	907K
	ExtractIlluminaBarcodes.jar	2013-09-23 18:56	1.0M
	ExtractSequences.jar	2013-09-23 18:56	912K
	FastqToSam.jar	2013-09-23 18:56	911K
	FilterSamReads.jar	2013-09-23 18:56	903K
	FixMateInformation.jar	2013-09-23 18:56	917K
	IlluminaBasecallsToFastq.jar	2013-09-23 18:56	1.0M
	IlluminaBasecallsToSam.jar	2013-09-23 18:56	1.0M
	IntervalListTools.jar	2013-09-23 18:56	899K
	MakeSitesOnlyVcf.jar	2013-09-23 18:56	1.5M
	MarkDuplicates.jar	2013-09-23 18:56	952K
	MarkIlluminaAdapters.jar	2013-09-23 18:56	902K
	MeanQualityByCycle.jar	2013-09-23 18:56	922K
	MergeBamAlignment.jar	2013-09-23 18:56	1.0M
	MergeSamFiles.jar	2013-09-23 18:56	911K
	MergeVcfs.jar	2013-09-23 18:56	1.5M
	NormalizeFasta.jar	2013-09-23 18:56	905K
	QualityScoreDistribution.jar	2013-09-23 18:56	920K
	ReorderSam.jar	2013-09-23 18:56	907K
	ReplaceSamHeader.jar	2013-09-23 18:56	890K
	RevertSam.jar	2013-09-23 18:56	893K
	SamFormatConverter.jar	2013-09-23 18:56	890K
	SamToFastq.jar	2013-09-23 18:56	899K
	SortSam.jar	2013-09-23 18:56	890K
	SplitVcfs.jar	2013-09-23 18:56	1.5M
	ValidateSamFile.jar	2013-09-23 18:56	957K
	VcfFormatConverter.jar	2013-09-23 18:56	1.5M
	ViewSam.jar	2013-09-23 18:56	890K
	apache-ant-1.8.2-bzip2.jar	2013-09-23 18:56	30K
	commons-jexl-2.1.1.jar	2013-09-23 18:56	261K
	commons-logging-1.1.1.jar	2013-09-23 18:56	59K
	picard-1.99.jar	2013-09-23 18:56	1.6M
	sam-1.99.jar	2013-09-23 18:56	623K
	snappy-java-1.0.3-rc3.jar	2013-09-23 18:56	967K
	tribble-1.99.jar	2013-09-23 18:56	293K
	variant-1.99.jar	2013-09-23 18:56	556K