<?xml version='1.0' encoding='UTF-8' standalone='yes'?>
<!-- Document definition -->
<!DOCTYPE MEME[
<!ELEMENT MEME (
  training_set,
  model, 
  motifs, 
  scanned_sites_summary?
)>
<!ATTLIST MEME 
  version CDATA #REQUIRED
  release CDATA #REQUIRED
>
<!-- Training-set elements -->
<!ELEMENT training_set (alphabet, ambigs, sequence*, letter_frequencies)>
<!ATTLIST training_set datafile CDATA #REQUIRED length CDATA #REQUIRED>
<!ELEMENT alphabet (letter*)>
<!ATTLIST alphabet name CDATA #REQUIRED>
<!ELEMENT ambigs (letter*)>
<!ELEMENT letter EMPTY>
<!ATTLIST letter id ID #REQUIRED>
<!ATTLIST letter symbol CDATA #REQUIRED>
<!ATTLIST letter equals CDATA #IMPLIED>
<!ATTLIST letter aliases CDATA #IMPLIED>
<!ATTLIST letter complement CDATA #IMPLIED>
<!ATTLIST letter name CDATA #IMPLIED>
<!ATTLIST letter colour CDATA #IMPLIED>
<!ELEMENT sequence EMPTY>
<!ATTLIST sequence id ID #REQUIRED
                   name CDATA #REQUIRED
                   length CDATA #REQUIRED
                   weight CDATA #REQUIRED
>
<!ELEMENT letter_frequencies (alphabet_array)>

<!-- Model elements -->
<!ELEMENT model (
  command_line,
  host,
  type,
  nmotifs,
  evalue_threshold,
  object_function,
  spfun,
  min_width,
  max_width,
  wg,
  ws,
  endgaps,
  minsites,
  maxsites,
  wnsites,
  spmap,
  spfuzz,
  prior,
  beta,
  maxiter,
  distance,
  num_sequences,
  num_positions,
  seed,
  hsfrac,
  maxwords,
  maxsize,
  csites,
  strands,
  priors_file,
  reason_for_stopping,
  back_order,
  background_frequencies
)>
<!ELEMENT command_line (#PCDATA)*>
<!ELEMENT host (#PCDATA)*>
<!ELEMENT type (#PCDATA)*>
<!ELEMENT nmotifs (#PCDATA)*>
<!ELEMENT evalue_threshold (#PCDATA)*>
<!ELEMENT object_function (#PCDATA)*>
<!ELEMENT spfun (#PCDATA)*>
<!ELEMENT min_width (#PCDATA)*>
<!ELEMENT max_width (#PCDATA)*>
<!ELEMENT wg (#PCDATA)*>
<!ELEMENT ws (#PCDATA)*>
<!ELEMENT endgaps (#PCDATA)*>
<!ELEMENT minsites (#PCDATA)*>
<!ELEMENT maxsites (#PCDATA)*>
<!ELEMENT wnsites (#PCDATA)*>
<!ELEMENT spmap (#PCDATA)*>
<!ELEMENT spfuzz (#PCDATA)*>
<!ELEMENT prior (#PCDATA)*>
<!ELEMENT beta (#PCDATA)*>
<!ELEMENT maxiter (#PCDATA)*>
<!ELEMENT distance (#PCDATA)*>
<!ELEMENT num_sequences (#PCDATA)*>
<!ELEMENT num_positions (#PCDATA)*>
<!ELEMENT seed (#PCDATA)*>
<!ELEMENT hsfrac (#PCDATA)*>
<!ELEMENT maxwords (#PCDATA)*>
<!ELEMENT maxsites (#PCDATA)*>
<!ELEMENT csites (#PCDATA)*>
<!ELEMENT strands (#PCDATA)*>
<!ELEMENT priors_file (#PCDATA)*>
<!ELEMENT reason_for_stopping (#PCDATA)*>
<!ELEMENT back_order (#PCDATA)*>
<!ELEMENT background_frequencies (alphabet_array)>
<!ATTLIST background_frequencies source CDATA #REQUIRED>

<!-- Motif elements -->
<!ELEMENT motifs (motif*)>
<!ELEMENT motif (scores, probabilities, regular_expression?, contributing_sites)>
<!ATTLIST motif id ID #REQUIRED
                name CDATA #REQUIRED
                alt CDATA ""
                width CDATA #REQUIRED
                sites CDATA #REQUIRED
                llr CDATA #REQUIRED
                ic CDATA #REQUIRED
                re CDATA #REQUIRED
                bayes_threshold CDATA #REQUIRED
                e_value CDATA #REQUIRED
                elapsed_time CDATA #REQUIRED
                url CDATA ""
>
<!ELEMENT scores (alphabet_matrix)>
<!ELEMENT probabilities (alphabet_matrix)>
<!ELEMENT regular_expression (#PCDATA)*>

<!-- Contributing site elements -->
<!-- Contributing sites are motif occurences found during the motif discovery phase -->
<!ELEMENT contributing_sites (contributing_site*)>
<!ELEMENT contributing_site (left_flank, site, right_flank)>
<!ATTLIST contributing_site sequence_id IDREF #REQUIRED
                          position CDATA #REQUIRED
                          strand (plus|minus|none) 'none'
                          pvalue CDATA #REQUIRED
>
<!-- The left_flank contains the sequence for 10 bases to the left of the motif start -->
<!ELEMENT left_flank (#PCDATA)>
<!-- The site contains the sequence for the motif instance -->
<!ELEMENT site (letter_ref*)>
<!-- The right_flank contains the sequence for 10 bases to the right of the motif end -->
<!ELEMENT right_flank (#PCDATA)>

<!-- Scanned site elements -->
<!-- Scanned sites are motif occurences found during the sequence scan phase -->
<!ELEMENT scanned_sites_summary (scanned_sites*)>
<!ATTLIST scanned_sites_summary p_thresh CDATA #REQUIRED>
<!ELEMENT scanned_sites (scanned_site*)>
<!ATTLIST scanned_sites sequence_id IDREF #REQUIRED
                        pvalue CDATA #REQUIRED
                        num_sites CDATA #REQUIRED>
<!ELEMENT scanned_site EMPTY>
<!ATTLIST scanned_site  motif_id IDREF #REQUIRED
                        strand (plus|minus|none) 'none'
                        position CDATA #REQUIRED
                        pvalue CDATA #REQUIRED>

<!-- Utility elements -->
<!-- A reference to a letter in the alphabet -->
<!ELEMENT letter_ref EMPTY>
<!ATTLIST letter_ref letter_id IDREF #REQUIRED>
<!-- A alphabet-array contains one floating point value for each letter in an alphabet -->
<!ELEMENT alphabet_array (value*)>
<!ELEMENT value (#PCDATA)>
<!ATTLIST value letter_id IDREF #REQUIRED>

<!-- A alphabet_matrix contains one alphabet_array for each position in a motif -->
<!ELEMENT alphabet_matrix (alphabet_array*)>

]>
<!-- Begin document body -->
<MEME version="4.12.0" release="Tue Jun 27 16:22:50 2017 -0700">
<training_set datafile="common/crp0.s" length="18">
<alphabet name="DNA with covalent modifications">
<letter id="A" symbol="A" complement="T" name="Adenine" colour="8510A8"/>
<letter id="C" symbol="C" complement="G" name="Cytosine" colour="A50026"/>
<letter id="G" symbol="G" complement="C" name="Guanine" colour="313695"/>
<letter id="T" symbol="T" complement="A" name="Thymine" colour="A89610"/>
<letter id="c" symbol="c" complement="4" name="5-Carboxylcytosine" colour="FEE090"/>
<letter id="f" symbol="f" complement="3" name="5-Formylcytosine" colour="FDAE61"/>
<letter id="h" symbol="h" complement="2" name="5-Hydroxymethylcytosine" colour="F46D43"/>
<letter id="m" symbol="m" complement="1" name="5-Methylcytosine" colour="D73027"/>
<letter id="n1" symbol="1" complement="m" name="Guanine:5-Methylcytosine" colour="4575B4"/>
<letter id="n2" symbol="2" complement="h" name="Guanine:5-Hydroxymethylcytosine" colour="74ADD1"/>
<letter id="n3" symbol="3" complement="f" name="Guanine:5-Formylcytosine" colour="ABD9E9"/>
<letter id="n4" symbol="4" complement="c" name="Guanine:5-Carboxylcytosine" colour="E0F3F8"/>
<letter id="x3F" symbol="?" equals="ACGTcfhm1234"/>
<letter id="z" symbol="z" equals="Ccfhm"/>
<letter id="n9" symbol="9" equals="G1234"/>
<letter id="N" symbol="N" aliases="X" equals="ACGT"/>
<letter id="V" symbol="V" equals="ACG"/>
<letter id="H" symbol="H" equals="ACT"/>
<letter id="D" symbol="D" equals="AGT"/>
<letter id="B" symbol="B" equals="CGT"/>
<letter id="y" symbol="y" equals="Ccf"/>
<letter id="n8" symbol="8" equals="G34"/>
<letter id="M" symbol="M" equals="AC"/>
<letter id="R" symbol="R" equals="AG"/>
<letter id="W" symbol="W" equals="AT"/>
<letter id="S" symbol="S" equals="CG"/>
<letter id="Y" symbol="Y" equals="CT"/>
<letter id="K" symbol="K" equals="GT"/>
<letter id="x" symbol="x" equals="hm"/>
<letter id="n7" symbol="7" equals="12"/>
</alphabet>
<sequence id="sequence_0" name="ce1cg" length="105" weight="1.000000" />
<sequence id="sequence_1" name="ara" length="105" weight="1.000000" />
<sequence id="sequence_2" name="bglr1" length="105" weight="1.000000" />
<sequence id="sequence_3" name="crp" length="105" weight="1.000000" />
<sequence id="sequence_4" name="cya" length="105" weight="1.000000" />
<sequence id="sequence_5" name="deop2" length="105" weight="1.000000" />
<sequence id="sequence_6" name="gale" length="105" weight="1.000000" />
<sequence id="sequence_7" name="ilv" length="105" weight="1.000000" />
<sequence id="sequence_8" name="lac" length="105" weight="1.000000" />
<sequence id="sequence_9" name="male" length="105" weight="1.000000" />
<sequence id="sequence_10" name="malk" length="105" weight="1.000000" />
<sequence id="sequence_11" name="malt" length="105" weight="1.000000" />
<sequence id="sequence_12" name="ompa" length="105" weight="1.000000" />
<sequence id="sequence_13" name="tnaa" length="105" weight="1.000000" />
<sequence id="sequence_14" name="uxu1" length="105" weight="1.000000" />
<sequence id="sequence_15" name="pbr322" length="105" weight="1.000000" />
<sequence id="sequence_16" name="trn9cat" length="105" weight="1.000000" />
<sequence id="sequence_17" name="tdc" length="105" weight="1.000000" />
<letter_frequencies>
<alphabet_array>
<value letter_id="A">0.303</value>
<value letter_id="C">0.183</value>
<value letter_id="G">0.209</value>
<value letter_id="T">0.306</value>
<value letter_id="c">0.000</value>
<value letter_id="f">0.000</value>
<value letter_id="h">0.000</value>
<value letter_id="m">0.000</value>
<value letter_id="n1">0.000</value>
<value letter_id="n2">0.000</value>
<value letter_id="n3">0.000</value>
<value letter_id="n4">0.000</value>
</alphabet_array>
</letter_frequencies>
</training_set>
<model>
<command_line>meme -oc results/motif.meme.crp0.extdna -nostatus -alph common/extended_dna.alph -nmotifs 3 common/crp0.s </command_line>
<host>sh-ln04.stanford.edu</host>
<type>zoops</type>
<nmotifs>3</nmotifs>
<evalue_threshold>inf</evalue_threshold>
<object_function>E-value of product of p-values</object_function>
<use_llr>0</use_llr>
<min_width>8</min_width>
<max_width>50</max_width>
<wg>11</wg>
<ws>1</ws>
<endgaps>yes</endgaps>
<substring>yes</substring>
<minsites>2</minsites>
<maxsites>18</maxsites>
<wnsites>0.8</wnsites>
<spmap>uni</spmap>
<spfuzz>0.5</spfuzz>
<prior>dirichlet</prior>
<beta>0.01</beta>
<maxiter>50</maxiter>
<distance>1e-05</distance>
<num_sequences>18</num_sequences>
<num_positions>1890</num_positions>
<seed>0</seed>
<ctfrac>-1</ctfrac>
<maxwords>-1</maxwords>
<strands>forward</strands>
<priors_file></priors_file>
<reason_for_stopping>Stopped because requested number of motifs (3) found.</reason_for_stopping>
<background_frequencies source="dataset with add-one prior applied">
<alphabet_array>
<value letter_id="A">0.301</value>
<value letter_id="C">0.182</value>
<value letter_id="G">0.208</value>
<value letter_id="T">0.304</value>
<value letter_id="c">0.001</value>
<value letter_id="f">0.001</value>
<value letter_id="h">0.001</value>
<value letter_id="m">0.001</value>
<value letter_id="n1">0.001</value>
<value letter_id="n2">0.001</value>
<value letter_id="n3">0.001</value>
<value letter_id="n4">0.001</value>
</alphabet_array>
</background_frequencies>
</model>
<motifs>
<motif id="motif_1" name="TGTGANNKAGNTCACAHWW" alt="MEME-1" width="19" sites="17" ic="45.6" re="15.1" llr="178" e_value="3.6e+002" bayes_threshold="7.31103" elapsed_time="0.726434">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">-1073</value>
<value letter_id="C">-4</value>
<value letter_id="G">-1073</value>
<value letter_id="T">144</value>
<value letter_id="c">-1073</value>
<value letter_id="f">-1073</value>
<value letter_id="h">-1073</value>
<value letter_id="m">-1073</value>
<value letter_id="n1">-1073</value>
<value letter_id="n2">-1073</value>
<value letter_id="n3">-1073</value>
<value letter_id="n4">-1073</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1073</value>
<value letter_id="C">-163</value>
<value letter_id="G">188</value>
<value letter_id="T">-79</value>
<value letter_id="c">-1073</value>
<value letter_id="f">-1073</value>
<value letter_id="h">-1073</value>
<value letter_id="m">-1073</value>
<value letter_id="n1">-1073</value>
<value letter_id="n2">-1073</value>
<value letter_id="n3">-1073</value>
<value letter_id="n4">-1073</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1073</value>
<value letter_id="C">-163</value>
<value letter_id="G">-1073</value>
<value letter_id="T">163</value>
<value letter_id="c">-1073</value>
<value letter_id="f">-1073</value>
<value letter_id="h">-1073</value>
<value letter_id="m">-1073</value>
<value letter_id="n1">-1073</value>
<value letter_id="n2">-1073</value>
<value letter_id="n3">-1073</value>
<value letter_id="n4">-1073</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-77</value>
<value letter_id="C">-1073</value>
<value letter_id="G">188</value>
<value letter_id="T">-237</value>
<value letter_id="c">-1073</value>
<value letter_id="f">-1073</value>
<value letter_id="h">-1073</value>
<value letter_id="m">-1073</value>
<value letter_id="n1">-1073</value>
<value letter_id="n2">-1073</value>
<value letter_id="n3">-1073</value>
<value letter_id="n4">-1073</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">164</value>
<value letter_id="C">-163</value>
<value letter_id="G">-1073</value>
<value letter_id="T">-1073</value>
<value letter_id="c">-1073</value>
<value letter_id="f">-1073</value>
<value letter_id="h">-1073</value>
<value letter_id="m">-1073</value>
<value letter_id="n1">-1073</value>
<value letter_id="n2">-1073</value>
<value letter_id="n3">-1073</value>
<value letter_id="n4">-1073</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">23</value>
<value letter_id="C">-4</value>
<value letter_id="G">-24</value>
<value letter_id="T">-5</value>
<value letter_id="c">-1073</value>
<value letter_id="f">-1073</value>
<value letter_id="h">-1073</value>
<value letter_id="m">-1073</value>
<value letter_id="n1">-1073</value>
<value letter_id="n2">-1073</value>
<value letter_id="n3">-1073</value>
<value letter_id="n4">-1073</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-36</value>
<value letter_id="C">96</value>
<value letter_id="G">18</value>
<value letter_id="T">-79</value>
<value letter_id="c">-1073</value>
<value letter_id="f">-1073</value>
<value letter_id="h">-1073</value>
<value letter_id="m">-1073</value>
<value letter_id="n1">-1073</value>
<value letter_id="n2">-1073</value>
<value letter_id="n3">-1073</value>
<value letter_id="n4">-1073</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-136</value>
<value letter_id="C">-4</value>
<value letter_id="G">98</value>
<value letter_id="T">-5</value>
<value letter_id="c">-1073</value>
<value letter_id="f">-1073</value>
<value letter_id="h">-1073</value>
<value letter_id="m">-1073</value>
<value letter_id="n1">-1073</value>
<value letter_id="n2">-1073</value>
<value letter_id="n3">-1073</value>
<value letter_id="n4">-1073</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">81</value>
<value letter_id="C">-1073</value>
<value letter_id="G">18</value>
<value letter_id="T">-37</value>
<value letter_id="c">-1073</value>
<value letter_id="f">-1073</value>
<value letter_id="h">-1073</value>
<value letter_id="m">-1073</value>
<value letter_id="n1">-1073</value>
<value letter_id="n2">-1073</value>
<value letter_id="n3">-1073</value>
<value letter_id="n4">-1073</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-235</value>
<value letter_id="C">37</value>
<value letter_id="G">135</value>
<value letter_id="T">-79</value>
<value letter_id="c">-1073</value>
<value letter_id="f">-1073</value>
<value letter_id="h">-1073</value>
<value letter_id="m">-1073</value>
<value letter_id="n1">-1073</value>
<value letter_id="n2">-1073</value>
<value letter_id="n3">-1073</value>
<value letter_id="n4">-1073</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-77</value>
<value letter_id="C">69</value>
<value letter_id="G">-24</value>
<value letter_id="T">21</value>
<value letter_id="c">-1073</value>
<value letter_id="f">-1073</value>
<value letter_id="h">-1073</value>
<value letter_id="m">-1073</value>
<value letter_id="n1">-1073</value>
<value letter_id="n2">-1073</value>
<value letter_id="n3">-1073</value>
<value letter_id="n4">-1073</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1073</value>
<value letter_id="C">-63</value>
<value letter_id="G">-24</value>
<value letter_id="T">121</value>
<value letter_id="c">-1073</value>
<value letter_id="f">-1073</value>
<value letter_id="h">-1073</value>
<value letter_id="m">-1073</value>
<value letter_id="n1">-1073</value>
<value letter_id="n2">-1073</value>
<value letter_id="n3">-1073</value>
<value letter_id="n4">-1073</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-235</value>
<value letter_id="C">228</value>
<value letter_id="G">-1073</value>
<value letter_id="T">-237</value>
<value letter_id="c">-1073</value>
<value letter_id="f">-1073</value>
<value letter_id="h">-1073</value>
<value letter_id="m">-1073</value>
<value letter_id="n1">-1073</value>
<value letter_id="n2">-1073</value>
<value letter_id="n3">-1073</value>
<value letter_id="n4">-1073</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">145</value>
<value letter_id="C">-1073</value>
<value letter_id="G">-82</value>
<value letter_id="T">-237</value>
<value letter_id="c">-1073</value>
<value letter_id="f">-1073</value>
<value letter_id="h">-1073</value>
<value letter_id="m">-1073</value>
<value letter_id="n1">-1073</value>
<value letter_id="n2">-1073</value>
<value letter_id="n3">-1073</value>
<value letter_id="n4">-1073</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-235</value>
<value letter_id="C">228</value>
<value letter_id="G">-1073</value>
<value letter_id="T">-237</value>
<value letter_id="c">-1073</value>
<value letter_id="f">-1073</value>
<value letter_id="h">-1073</value>
<value letter_id="m">-1073</value>
<value letter_id="n1">-1073</value>
<value letter_id="n2">-1073</value>
<value letter_id="n3">-1073</value>
<value letter_id="n4">-1073</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">134</value>
<value letter_id="C">-163</value>
<value letter_id="G">-182</value>
<value letter_id="T">-137</value>
<value letter_id="c">-1073</value>
<value letter_id="f">-1073</value>
<value letter_id="h">-1073</value>
<value letter_id="m">-1073</value>
<value letter_id="n1">-1073</value>
<value letter_id="n2">-1073</value>
<value letter_id="n3">-1073</value>
<value letter_id="n4">-1073</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-36</value>
<value letter_id="C">69</value>
<value letter_id="G">-182</value>
<value letter_id="T">44</value>
<value letter_id="c">-1073</value>
<value letter_id="f">-1073</value>
<value letter_id="h">-1073</value>
<value letter_id="m">-1073</value>
<value letter_id="n1">-1073</value>
<value letter_id="n2">-1073</value>
<value letter_id="n3">-1073</value>
<value letter_id="n4">-1073</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">64</value>
<value letter_id="C">-1073</value>
<value letter_id="G">-1073</value>
<value letter_id="T">80</value>
<value letter_id="c">-1073</value>
<value letter_id="f">-1073</value>
<value letter_id="h">-1073</value>
<value letter_id="m">-1073</value>
<value letter_id="n1">-1073</value>
<value letter_id="n2">-1073</value>
<value letter_id="n3">-1073</value>
<value letter_id="n4">-1073</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">23</value>
<value letter_id="C">-163</value>
<value letter_id="G">-1073</value>
<value letter_id="T">95</value>
<value letter_id="c">-1073</value>
<value letter_id="f">-1073</value>
<value letter_id="h">-1073</value>
<value letter_id="m">-1073</value>
<value letter_id="n1">-1073</value>
<value letter_id="n2">-1073</value>
<value letter_id="n3">-1073</value>
<value letter_id="n4">-1073</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.176471</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.823529</value>
<value letter_id="c">0.000000</value>
<value letter_id="f">0.000000</value>
<value letter_id="h">0.000000</value>
<value letter_id="m">0.000000</value>
<value letter_id="n1">0.000000</value>
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<letter_ref letter_id="A"/>
</site>
<right_flank>TTAGAATTCG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_7" position="41" strand="plus" pvalue="1.87e-05" >
<left_flank>CAGTACAAAA</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="T"/>
</site>
<right_flank>TTCCCTTTGC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_11" position="43" strand="plus" pvalue="2.01e-05" >
<left_flank>GATTTGGAAT</left_flank>
<site>
<letter_ref letter_id="T"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="C"/>
</site>
<right_flank>AGACACATAA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_4" position="52" strand="plus" pvalue="2.91e-05" >
<left_flank>ATCAGCAAGG</left_flank>
<site>
<letter_ref letter_id="T"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="T"/>
</site>
<right_flank>TAGACCATTT</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_10" position="63" strand="plus" pvalue="5.40e-05" >
<left_flank>TAAGGAATTT</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>ATCGTGGCGA</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_2" name="GCATCRGGCG" alt="MEME-2" width="10" sites="2" ic="34.8" re="20.9" llr="29" e_value="1.9e+003" bayes_threshold="9.75322" elapsed_time="1.163881">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">-765</value>
<value letter_id="C">-765</value>
<value letter_id="G">226</value>
<value letter_id="T">-765</value>
<value letter_id="c">-765</value>
<value letter_id="f">-765</value>
<value letter_id="h">-765</value>
<value letter_id="m">-765</value>
<value letter_id="n1">-765</value>
<value letter_id="n2">-765</value>
<value letter_id="n3">-765</value>
<value letter_id="n4">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-765</value>
<value letter_id="C">245</value>
<value letter_id="G">-765</value>
<value letter_id="T">-765</value>
<value letter_id="c">-765</value>
<value letter_id="f">-765</value>
<value letter_id="h">-765</value>
<value letter_id="m">-765</value>
<value letter_id="n1">-765</value>
<value letter_id="n2">-765</value>
<value letter_id="n3">-765</value>
<value letter_id="n4">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">173</value>
<value letter_id="C">-765</value>
<value letter_id="G">-765</value>
<value letter_id="T">-765</value>
<value letter_id="c">-765</value>
<value letter_id="f">-765</value>
<value letter_id="h">-765</value>
<value letter_id="m">-765</value>
<value letter_id="n1">-765</value>
<value letter_id="n2">-765</value>
<value letter_id="n3">-765</value>
<value letter_id="n4">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-765</value>
<value letter_id="C">-765</value>
<value letter_id="G">-765</value>
<value letter_id="T">171</value>
<value letter_id="c">-765</value>
<value letter_id="f">-765</value>
<value letter_id="h">-765</value>
<value letter_id="m">-765</value>
<value letter_id="n1">-765</value>
<value letter_id="n2">-765</value>
<value letter_id="n3">-765</value>
<value letter_id="n4">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-765</value>
<value letter_id="C">245</value>
<value letter_id="G">-765</value>
<value letter_id="T">-765</value>
<value letter_id="c">-765</value>
<value letter_id="f">-765</value>
<value letter_id="h">-765</value>
<value letter_id="m">-765</value>
<value letter_id="n1">-765</value>
<value letter_id="n2">-765</value>
<value letter_id="n3">-765</value>
<value letter_id="n4">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">73</value>
<value letter_id="C">-765</value>
<value letter_id="G">126</value>
<value letter_id="T">-765</value>
<value letter_id="c">-765</value>
<value letter_id="f">-765</value>
<value letter_id="h">-765</value>
<value letter_id="m">-765</value>
<value letter_id="n1">-765</value>
<value letter_id="n2">-765</value>
<value letter_id="n3">-765</value>
<value letter_id="n4">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-765</value>
<value letter_id="C">-765</value>
<value letter_id="G">226</value>
<value letter_id="T">-765</value>
<value letter_id="c">-765</value>
<value letter_id="f">-765</value>
<value letter_id="h">-765</value>
<value letter_id="m">-765</value>
<value letter_id="n1">-765</value>
<value letter_id="n2">-765</value>
<value letter_id="n3">-765</value>
<value letter_id="n4">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-765</value>
<value letter_id="C">-765</value>
<value letter_id="G">226</value>
<value letter_id="T">-765</value>
<value letter_id="c">-765</value>
<value letter_id="f">-765</value>
<value letter_id="h">-765</value>
<value letter_id="m">-765</value>
<value letter_id="n1">-765</value>
<value letter_id="n2">-765</value>
<value letter_id="n3">-765</value>
<value letter_id="n4">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-765</value>
<value letter_id="C">245</value>
<value letter_id="G">-765</value>
<value letter_id="T">-765</value>
<value letter_id="c">-765</value>
<value letter_id="f">-765</value>
<value letter_id="h">-765</value>
<value letter_id="m">-765</value>
<value letter_id="n1">-765</value>
<value letter_id="n2">-765</value>
<value letter_id="n3">-765</value>
<value letter_id="n4">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-765</value>
<value letter_id="C">-765</value>
<value letter_id="G">226</value>
<value letter_id="T">-765</value>
<value letter_id="c">-765</value>
<value letter_id="f">-765</value>
<value letter_id="h">-765</value>
<value letter_id="m">-765</value>
<value letter_id="n1">-765</value>
<value letter_id="n2">-765</value>
<value letter_id="n3">-765</value>
<value letter_id="n4">-765</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">1.000000</value>
<value letter_id="T">0.000000</value>
<value letter_id="c">0.000000</value>
<value letter_id="f">0.000000</value>
<value letter_id="h">0.000000</value>
<value letter_id="m">0.000000</value>
<value letter_id="n1">0.000000</value>
<value letter_id="n2">0.000000</value>
<value letter_id="n3">0.000000</value>
<value letter_id="n4">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
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<value letter_id="G">0.000000</value>
<value letter_id="T">0.000000</value>
<value letter_id="c">0.000000</value>
<value letter_id="f">0.000000</value>
<value letter_id="h">0.000000</value>
<value letter_id="m">0.000000</value>
<value letter_id="n1">0.000000</value>
<value letter_id="n2">0.000000</value>
<value letter_id="n3">0.000000</value>
<value letter_id="n4">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">1.000000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.000000</value>
<value letter_id="c">0.000000</value>
<value letter_id="f">0.000000</value>
<value letter_id="h">0.000000</value>
<value letter_id="m">0.000000</value>
<value letter_id="n1">0.000000</value>
<value letter_id="n2">0.000000</value>
<value letter_id="n3">0.000000</value>
<value letter_id="n4">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">1.000000</value>
<value letter_id="c">0.000000</value>
<value letter_id="f">0.000000</value>
<value letter_id="h">0.000000</value>
<value letter_id="m">0.000000</value>
<value letter_id="n1">0.000000</value>
<value letter_id="n2">0.000000</value>
<value letter_id="n3">0.000000</value>
<value letter_id="n4">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">1.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.000000</value>
<value letter_id="c">0.000000</value>
<value letter_id="f">0.000000</value>
<value letter_id="h">0.000000</value>
<value letter_id="m">0.000000</value>
<value letter_id="n1">0.000000</value>
<value letter_id="n2">0.000000</value>
<value letter_id="n3">0.000000</value>
<value letter_id="n4">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.500000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.500000</value>
<value letter_id="T">0.000000</value>
<value letter_id="c">0.000000</value>
<value letter_id="f">0.000000</value>
<value letter_id="h">0.000000</value>
<value letter_id="m">0.000000</value>
<value letter_id="n1">0.000000</value>
<value letter_id="n2">0.000000</value>
<value letter_id="n3">0.000000</value>
<value letter_id="n4">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">1.000000</value>
<value letter_id="T">0.000000</value>
<value letter_id="c">0.000000</value>
<value letter_id="f">0.000000</value>
<value letter_id="h">0.000000</value>
<value letter_id="m">0.000000</value>
<value letter_id="n1">0.000000</value>
<value letter_id="n2">0.000000</value>
<value letter_id="n3">0.000000</value>
<value letter_id="n4">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">1.000000</value>
<value letter_id="T">0.000000</value>
<value letter_id="c">0.000000</value>
<value letter_id="f">0.000000</value>
<value letter_id="h">0.000000</value>
<value letter_id="m">0.000000</value>
<value letter_id="n1">0.000000</value>
<value letter_id="n2">0.000000</value>
<value letter_id="n3">0.000000</value>
<value letter_id="n4">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">1.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.000000</value>
<value letter_id="c">0.000000</value>
<value letter_id="f">0.000000</value>
<value letter_id="h">0.000000</value>
<value letter_id="m">0.000000</value>
<value letter_id="n1">0.000000</value>
<value letter_id="n2">0.000000</value>
<value letter_id="n3">0.000000</value>
<value letter_id="n4">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">1.000000</value>
<value letter_id="T">0.000000</value>
<value letter_id="c">0.000000</value>
<value letter_id="f">0.000000</value>
<value letter_id="h">0.000000</value>
<value letter_id="m">0.000000</value>
<value letter_id="n1">0.000000</value>
<value letter_id="n2">0.000000</value>
<value letter_id="n3">0.000000</value>
<value letter_id="n4">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
GCATC[AG]GGCG
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_0" position="23" strand="plus" pvalue="2.15e-07" >
<left_flank>GGTTTTTGTG</left_flank>
<site>
<letter_ref letter_id="G"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="G"/>
</site>
<right_flank>AGAATAGCGC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_15" position="92" strand="plus" pvalue="5.26e-07" >
<left_flank>AGAAAATACC</left_flank>
<site>
<letter_ref letter_id="G"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="G"/>
</site>
<right_flank>CTC</right_flank>
</contributing_site>
</contributing_sites>
</motif>
<motif id="motif_3" name="GCWCCCCR" alt="MEME-3" width="8" sites="2" ic="26.7" re="16.3" llr="23" e_value="2.9e+003" bayes_threshold="9.783" elapsed_time="1.603734">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">-765</value>
<value letter_id="C">-765</value>
<value letter_id="G">226</value>
<value letter_id="T">-765</value>
<value letter_id="c">-765</value>
<value letter_id="f">-765</value>
<value letter_id="h">-765</value>
<value letter_id="m">-765</value>
<value letter_id="n1">-765</value>
<value letter_id="n2">-765</value>
<value letter_id="n3">-765</value>
<value letter_id="n4">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-765</value>
<value letter_id="C">245</value>
<value letter_id="G">-765</value>
<value letter_id="T">-765</value>
<value letter_id="c">-765</value>
<value letter_id="f">-765</value>
<value letter_id="h">-765</value>
<value letter_id="m">-765</value>
<value letter_id="n1">-765</value>
<value letter_id="n2">-765</value>
<value letter_id="n3">-765</value>
<value letter_id="n4">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">73</value>
<value letter_id="C">-765</value>
<value letter_id="G">-765</value>
<value letter_id="T">71</value>
<value letter_id="c">-765</value>
<value letter_id="f">-765</value>
<value letter_id="h">-765</value>
<value letter_id="m">-765</value>
<value letter_id="n1">-765</value>
<value letter_id="n2">-765</value>
<value letter_id="n3">-765</value>
<value letter_id="n4">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-765</value>
<value letter_id="C">245</value>
<value letter_id="G">-765</value>
<value letter_id="T">-765</value>
<value letter_id="c">-765</value>
<value letter_id="f">-765</value>
<value letter_id="h">-765</value>
<value letter_id="m">-765</value>
<value letter_id="n1">-765</value>
<value letter_id="n2">-765</value>
<value letter_id="n3">-765</value>
<value letter_id="n4">-765</value>
</alphabet_array>
<alphabet_array>
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<value letter_id="C">245</value>
<value letter_id="G">-765</value>
<value letter_id="T">-765</value>
<value letter_id="c">-765</value>
<value letter_id="f">-765</value>
<value letter_id="h">-765</value>
<value letter_id="m">-765</value>
<value letter_id="n1">-765</value>
<value letter_id="n2">-765</value>
<value letter_id="n3">-765</value>
<value letter_id="n4">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-765</value>
<value letter_id="C">245</value>
<value letter_id="G">-765</value>
<value letter_id="T">-765</value>
<value letter_id="c">-765</value>
<value letter_id="f">-765</value>
<value letter_id="h">-765</value>
<value letter_id="m">-765</value>
<value letter_id="n1">-765</value>
<value letter_id="n2">-765</value>
<value letter_id="n3">-765</value>
<value letter_id="n4">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-765</value>
<value letter_id="C">245</value>
<value letter_id="G">-765</value>
<value letter_id="T">-765</value>
<value letter_id="c">-765</value>
<value letter_id="f">-765</value>
<value letter_id="h">-765</value>
<value letter_id="m">-765</value>
<value letter_id="n1">-765</value>
<value letter_id="n2">-765</value>
<value letter_id="n3">-765</value>
<value letter_id="n4">-765</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">73</value>
<value letter_id="C">-765</value>
<value letter_id="G">126</value>
<value letter_id="T">-765</value>
<value letter_id="c">-765</value>
<value letter_id="f">-765</value>
<value letter_id="h">-765</value>
<value letter_id="m">-765</value>
<value letter_id="n1">-765</value>
<value letter_id="n2">-765</value>
<value letter_id="n3">-765</value>
<value letter_id="n4">-765</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
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<value letter_id="n1">0.000000</value>
<value letter_id="n2">0.000000</value>
<value letter_id="n3">0.000000</value>
<value letter_id="n4">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.500000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.500000</value>
<value letter_id="c">0.000000</value>
<value letter_id="f">0.000000</value>
<value letter_id="h">0.000000</value>
<value letter_id="m">0.000000</value>
<value letter_id="n1">0.000000</value>
<value letter_id="n2">0.000000</value>
<value letter_id="n3">0.000000</value>
<value letter_id="n4">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">1.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.000000</value>
<value letter_id="c">0.000000</value>
<value letter_id="f">0.000000</value>
<value letter_id="h">0.000000</value>
<value letter_id="m">0.000000</value>
<value letter_id="n1">0.000000</value>
<value letter_id="n2">0.000000</value>
<value letter_id="n3">0.000000</value>
<value letter_id="n4">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">1.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.000000</value>
<value letter_id="c">0.000000</value>
<value letter_id="f">0.000000</value>
<value letter_id="h">0.000000</value>
<value letter_id="m">0.000000</value>
<value letter_id="n1">0.000000</value>
<value letter_id="n2">0.000000</value>
<value letter_id="n3">0.000000</value>
<value letter_id="n4">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">1.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.000000</value>
<value letter_id="c">0.000000</value>
<value letter_id="f">0.000000</value>
<value letter_id="h">0.000000</value>
<value letter_id="m">0.000000</value>
<value letter_id="n1">0.000000</value>
<value letter_id="n2">0.000000</value>
<value letter_id="n3">0.000000</value>
<value letter_id="n4">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">1.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="T">0.000000</value>
<value letter_id="c">0.000000</value>
<value letter_id="f">0.000000</value>
<value letter_id="h">0.000000</value>
<value letter_id="m">0.000000</value>
<value letter_id="n1">0.000000</value>
<value letter_id="n2">0.000000</value>
<value letter_id="n3">0.000000</value>
<value letter_id="n4">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.500000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.500000</value>
<value letter_id="T">0.000000</value>
<value letter_id="c">0.000000</value>
<value letter_id="f">0.000000</value>
<value letter_id="h">0.000000</value>
<value letter_id="m">0.000000</value>
<value letter_id="n1">0.000000</value>
<value letter_id="n2">0.000000</value>
<value letter_id="n3">0.000000</value>
<value letter_id="n4">0.000000</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
GC[AT]CCCC[AG]
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_13" position="59" strand="plus" pvalue="5.23e-06" >
<left_flank>ATTTAATATT</left_flank>
<site>
<letter_ref letter_id="G"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="G"/>
</site>
<right_flank>AACGATTGTG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_8" position="33" strand="plus" pvalue="1.28e-05" >
<left_flank>CACTCATTAG</left_flank>
<site>
<letter_ref letter_id="G"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>GGCTTTACAC</right_flank>
</contributing_site>
</contributing_sites>
</motif>
</motifs>
<scanned_sites_summary p_thresh="0.0001">
<scanned_sites sequence_id="sequence_0" pvalue="8.48e-07" num_sites="2"><scanned_site motif_id="motif_2" strand="plus" position="23" pvalue="2.15e-07"/>
<scanned_site motif_id="motif_1" strand="plus" position="63" pvalue="2.67e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_1" pvalue="1.44e-03" num_sites="1"><scanned_site motif_id="motif_1" strand="plus" position="57" pvalue="2.01e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_2" pvalue="1.48e-02" num_sites="1"><scanned_site motif_id="motif_1" strand="plus" position="78" pvalue="4.63e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_3" pvalue="1.95e-03" num_sites="1"><scanned_site motif_id="motif_1" strand="plus" position="65" pvalue="4.24e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_4" pvalue="1.90e-02" num_sites="1"><scanned_site motif_id="motif_1" strand="plus" position="52" pvalue="2.91e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_5" pvalue="7.27e-03" num_sites="1"><scanned_site motif_id="motif_1" strand="plus" position="9" pvalue="2.01e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_6" pvalue="2.85e-02" num_sites="1"><scanned_site motif_id="motif_1" strand="plus" position="26" pvalue="1.17e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_7" pvalue="1.96e-03" num_sites="1"><scanned_site motif_id="motif_1" strand="plus" position="41" pvalue="1.87e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_8" pvalue="2.30e-07" num_sites="2"><scanned_site motif_id="motif_1" strand="plus" position="11" pvalue="2.85e-07"/>
<scanned_site motif_id="motif_3" strand="plus" position="33" pvalue="1.28e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_9" pvalue="8.49e-04" num_sites="1"><scanned_site motif_id="motif_1" strand="plus" position="16" pvalue="4.06e-07"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_10" pvalue="2.40e-02" num_sites="1"><scanned_site motif_id="motif_1" strand="plus" position="63" pvalue="5.40e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_11" pvalue="3.11e-02" num_sites="1"><scanned_site motif_id="motif_1" strand="plus" position="43" pvalue="2.01e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_12" pvalue="2.04e-03" num_sites="1"><scanned_site motif_id="motif_1" strand="plus" position="50" pvalue="4.06e-07"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_13" pvalue="1.02e-05" num_sites="2"><scanned_site motif_id="motif_3" strand="plus" position="59" pvalue="5.23e-06"/>
<scanned_site motif_id="motif_1" strand="plus" position="73" pvalue="1.65e-06"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_14" pvalue="1.99e-02" num_sites="1"><scanned_site motif_id="motif_1" strand="plus" position="19" pvalue="1.87e-05"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_15" pvalue="3.56e-07" num_sites="2"><scanned_site motif_id="motif_1" strand="plus" position="55" pvalue="9.85e-07"/>
<scanned_site motif_id="motif_2" strand="plus" position="92" pvalue="5.26e-07"/>
</scanned_sites>
<scanned_sites sequence_id="sequence_16" pvalue="7.52e-01" num_sites="0"></scanned_sites>
<scanned_sites sequence_id="sequence_17" pvalue="2.95e-03" num_sites="1"><scanned_site motif_id="motif_1" strand="plus" position="80" pvalue="5.72e-07"/>
</scanned_sites>
</scanned_sites_summary>
</MEME>
