Query_ID	Target_ID	Optimal_offset	p-value	E-value	q-value	Overlap	Query_consensus	Target_consensus	Orientation
V_MYOD_01	V_MYOD_01	0	3.89934e-09	1.94967e-08	3.89934e-08	12	CAACAGGTGGTG	CAACAGGTGGTG	+
V_MYOD_01	V_E47_01	1	4.90424e-06	2.45212e-05	2.45212e-05	12	CAACAGGTGGTG	ACGGCAGGTGTCCCC	+
V_MYOD_01	V_AP4_01	2	0.003822	0.01911	0.01274	12	CAACAGGTGGTG	AGAACCAGCTGCGGTCAG	+
V_MYOD_01	V_CMYB_01	5	0.0609666	0.304833	0.0870951	12	CAACAGGTGGTG	CCCAACGGCGGTTGGGGG	+
V_E47_01	V_E47_01	0	2.30706e-16	1.15353e-15	2.30706e-15	15	ACGGCAGGTGTCCCC	ACGGCAGGTGTCCCC	+
V_E47_01	V_MYOD_01	-1	3.14289e-05	0.000157144	0.000157144	12	ACGGCAGGTGTCCCC	CAACAGGTGGTG	+
V_E47_01	V_AP4_01	3	0.00108032	0.00540161	0.00360107	15	ACGGCAGGTGTCCCC	CTGACCACAGCTGACTCT	-
V_E47_01	V_CMYB_01	4	0.0761848	0.380924	0.108835	14	ACGGCAGGTGTCCCC	CCCAACGGCGGTTGGGGG	+
V_VMYB_01	V_VMYB_01	0	7.10954e-14	3.55477e-13	7.10954e-13	10	AATAACGGAA	AATAACGGAA	+
V_VMYB_01	V_CMYB_01	2	0.000408361	0.0020418	0.0020418	10	AATAACGGAA	CCCCCAACCGCCATTGGG	-
V_CMYB_01	V_CMYB_01	0	2.15913e-20	1.07957e-19	2.15913e-19	18	CCCAACGGCGGTTGGGGG	CCCAACGGCGGTTGGGGG	+
V_CMYB_01	V_VMYB_01	-6	0.00188959	0.00944793	0.00944793	10	CCCAACGGCGGTTGGGGG	TTCCGTTATT	-
V_CMYB_01	V_E47_01	-4	0.053788	0.26894	0.13872	14	CCCAACGGCGGTTGGGGG	ACGGCAGGTGTCCCC	+
V_CMYB_01	V_MYOD_01	-5	0.0554879	0.277439	0.13872	12	CCCAACGGCGGTTGGGGG	CAACAGGTGGTG	+
V_CMYB_01	V_AP4_01	-1	0.0761615	0.380808	0.152323	17	CCCAACGGCGGTTGGGGG	CTGACCACAGCTGACTCT	-
V_AP4_01	V_AP4_01	0	1.82137e-13	9.10687e-13	1.82137e-12	18	AGAACCAGCTGCGGTCAG	AGAACCAGCTGCGGTCAG	+
V_AP4_01	V_E47_01	0	0.000793186	0.00396593	0.00396593	15	AGAACCAGCTGCGGTCAG	GCGGACACCTGCCGG	-
V_AP4_01	V_MYOD_01	-2	0.006413	0.032065	0.0213767	12	AGAACCAGCTGCGGTCAG	CAACAGGTGGTG	+
V_AP4_01	V_CMYB_01	-1	0.151847	0.759233	0.253078	17	AGAACCAGCTGCGGTCAG	CCCCCAACCGCCATTGGG	-

# Tomtom (Motif Comparison Tool): Version 5.4.0 compiled on May 20 2021 at 11:57:59
# The format of this file is described at https://meme-suite.org/meme/doc/tomtom-output-format.html.
# tomtom -verbosity 1 -dist allr -oc results/tomtom2 -incomplete-scores common/sample.meme common/sample.meme