********************************************************************************
STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
********************************************************************************
MEME version 5.4.0 (Release date: Mon Aug 16 16:18:19 2021 -0700)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

********************************************************************************


********************************************************************************
REFERENCE
********************************************************************************
If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: accurate and versatile sequence motif discovery",
Bioinformatics, Mar. 24, 2021.
********************************************************************************


ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.304 C 0.196 G 0.196 T 0.304 

MOTIF 1-AAAAACAACAA STREME-1
letter-probability matrix: alength= 4 w= 11 nsites= 7 S= 2.9e-004
 0.986163 0.003901 0.003901 0.006035
 0.572925 0.003901 0.141647 0.281527
 0.848417 0.003901 0.003901 0.143781
 0.986163 0.003901 0.003901 0.006035
 0.848417 0.141647 0.003901 0.006035
 0.006035 0.984028 0.003901 0.006035
 0.848417 0.003901 0.003901 0.143781
 0.848417 0.003901 0.141647 0.006035
 0.143781 0.846283 0.003901 0.006035
 0.986163 0.003901 0.003901 0.006035
 0.986163 0.003901 0.003901 0.006035

MOTIF 2-CATGTGAARAKT STREME-2
letter-probability matrix: alength= 4 w= 12 nsites= 7 S= 2.9e-004
 0.008517 0.977460 0.005505 0.008517
 0.980472 0.005505 0.005505 0.008517
 0.008517 0.005505 0.005505 0.980472
 0.008517 0.005505 0.977460 0.008517
 0.008517 0.005505 0.005505 0.980472
 0.008517 0.005505 0.977460 0.008517
 0.786081 0.005505 0.199896 0.008517
 0.980472 0.005505 0.005505 0.008517
 0.397299 0.005505 0.588678 0.008517
 0.786081 0.005505 0.005505 0.202908
 0.008517 0.005505 0.588678 0.397299
 0.008517 0.005505 0.005505 0.980472

********************************************************************************
Stopped because maximum number of motifs (2) reached.
********************************************************************************
COMMAND:	streme -p common/INO_up800.s -oc results/streme4 -objfun de -order 1 -nmotifs 2 -dna -hofract 0.2 -verbosity 1
********************************************************************************
CPU:		Timothys-Mac-Mini.local
********************************************************************************
FINALTIME:	0.41 seconds
********************************************************************************