hub proof
useOneFile on
shortLabel superTracks
longLabel Proof of SuperTrack Settings
email email@email.com

genome hg38

    # parent on + visibility xxx means that the track is hidden
    # parent on should not be allowed on children of supertracks
    track maxFolder
    superTrack on
    shortLabel maxFolder
    longLabel maxFolder
    type bed 4

        track max1
        parent maxFolder on
        visibility dense
        shortLabel max1
        longLabel max1
        type bigBed
        bigDataUrl http://hgdownload.soe.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/wgEncodeCaltechRnaSeqGm12892R2x75Il200JunctionsRep3V3.bigBed


        track max2
        parent maxFolder on
        visibility hide
        shortLabel max2
        longLabel max2
        type bigBed
        bigDataUrl http://hgdownload.soe.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/wgEncodeCaltechRnaSeqGm12892R2x75Il200JunctionsRep3V3.bigBed

    # without parent on it works fine
    track myFolderA
    superTrack on show
    shortLabel My Folder A
    longLabel My folder A keeps my tracks together

        track myFirstTrackA
        parent myFolderA
        visibility dense
        shortLabel Ex1 Track1
        longLabel Ex1 Track1
        type bigBed
        bigDataUrl http://hgdownload.soe.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/wgEncodeCaltechRnaSeqGm12892R2x75Il200JunctionsRep3V3.bigBed


        track mySecondTrackA
        parent myFolderA
        visibility hide
        shortLabel Ex2 Track2
        longLabel Ex2 Track2
        type bigBed
        bigDataUrl http://hgdownload.soe.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/wgEncodeCaltechRnaSeqGm12892R2x75Il200JunctionsRep3V3.bigBed

    # without "parent on" it works
    # though this is depreated syntax
    track myFolderB
    superTrack on show
    shortLabel My Folder B
    longLabel My folder B keeps my tracks together

        track myFirstTrackB
        parent myFolderB dense
        shortLabel Ex2 Track1
        longLabel Ex2 Track1
        type bigBed
        bigDataUrl http://hgdownload.soe.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/wgEncodeCaltechRnaSeqGm12892R2x75Il200JunctionsRep3V3.bigBed


        track mySecondTrackB
        parent myFolderB hide
        shortLabel Ex2 Track2
        longLabel Ex2 Track2
        type bigBed
        bigDataUrl http://hgdownload.soe.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/wgEncodeCaltechRnaSeqGm12892R2x75Il200JunctionsRep3V3.bigBed

    # this is deprecated syntax
    track myFolderC
    superTrack on show
    shortLabel My Folder C
    longLabel My folder C keeps my tracks together

        track myFirstTrackC
        superTrack myFolderC dense
        shortLabel Ex3 Track1
        longLabel Ex3 Track1
        type bigBed
        bigDataUrl http://hgdownload.soe.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/wgEncodeCaltechRnaSeqGm12892R2x75Il200JunctionsRep3V3.bigBed

        track mySecondTrackC
        superTrack myFolderC hide
        shortLabel Ex3 Track2
        longLabel Ex3 Track2
        type bigBed
        bigDataUrl http://hgdownload.soe.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/wgEncodeCaltechRnaSeqGm12892R2x75Il200JunctionsRep3V3.bigBed