psiblast PSIBLAST 2.2.22+ Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. protdb2b/uniprot.fa 1 gi|62287761|gb|AAX78367.1| CDY [Pan troglodytes] 495 BLOSUM62 10 11 1 F 1 1 gi|62287761|gb|AAX78367.1| CDY [Pan troglodytes] 495 1 gnl|BL_ORD_ID|1 A0PJI6 Homo sapiens 1 484 1 53.5285784215479 127 5.46089335822796e-10 299 466 13 172 0 0 40 79 12 170 VLSTRSTEKNALNTEVIKEMVNALNSAAADDS--KLVLFSAAGRVFCCGLDSGXFVKXLRNDRXRAXLEMVDTIKNFVKTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQTPDGCSSITFPKMMGKASANEMLIAGRKLTAREACTKGLVSQV LIRLRNPPVNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGK-FSAGAD----IRGFSAPRTFGL-----TLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKV ++ R+ NA++T +++++ L A D + +V+ A G+ F G D ++ R T+ + V + +KP+V ++ G A G G + C A+ +A P T G P + P++ G +A +++ +GR++ A EA G++ +V 2 gnl|BL_ORD_ID|5 Q9Y6V0-2 Homo sapiens 5 4866 1 22.7126123481596 47 0.998387766202832 304 346 2832 2874 0 0 11 20 0 43 STEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAGRVFCCGL STTKSHRTVVTMDESTSSVMTKIIEDEKPVDLTAGRRAVCCDV ST K+ + E +++ + +D K V +A R CC + 3 gnl|BL_ORD_ID|0 Q9Y6V0 Homo sapiens 0 5183 1 22.7126123481596 47 0.998387766202832 304 346 2832 2874 0 0 11 20 0 43 STEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAGRVFCCGL STTKSHRTVVTMDESTSSVMTKIIEDEKPVDLTAGRRAVCCDV ST K+ + E +++ + +D K V +A R CC + 6 16764 0 7154760 0.041 0.267 0.14 2 1 gi|62287761|gb|AAX78367.1| CDY [Pan troglodytes] 495 1 gnl|BL_ORD_ID|1 A0PJI6 Homo sapiens 1 484 1 234.242334698902 596 2.42164125473735e-64 299 466 13 172 0 0 40 79 12 170 VLSTRSTEKNALNTEVIKEMVNALNSAAADDS--KLVLFSAAGRVFCCGLDSGXFVKXLRNDRXRAXLEMVDTIKNFVKTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQTPDGCSSITFPKMMGKASANEMLIAGRKLTAREACTKGLVSQV LIRLRNPPVNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGK-FSAGAD----IRGFSAPRTFGL-----TLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQVGLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKV ++ R+ NA++T +++++ L A D + +V+ A G+ F G D ++ R T+ + V + +KP+V ++ G A G G + C A+ +A P T G P + P++ G +A +++ +GR++ A EA G++ +V 2 gnl|BL_ORD_ID|0 Q9Y6V0 Homo sapiens 0 5183 1 19.6861709129367 39 7.93374009449203 132 181 2198 2250 0 0 12 27 3 53 NEIINSTIETLAPDSPFDHKKTVSGFQKLEKLDPIAADQQDT---VVFKVTEG SDMASSIIESVVPKPEGPVADTVSTDLLISEKDPVKKAKKETGNGIILEVLEA +++ +S IE++ P TVS + + DP+ +++T ++ +V E 3 gnl|BL_ORD_ID|5 Q9Y6V0-2 Homo sapiens 5 4866 1 19.6861709129367 39 8.62411253482086 132 181 2198 2250 0 0 12 27 3 53 NEIINSTIETLAPDSPFDHKKTVSGFQKLEKLDPIAADQQDT---VVFKVTEG SDMASSIIESVVPKPEGPVADTVSTDLLISEKDPVKKAKKETGNGIILEVLEA +++ +S IE++ P TVS + + DP+ +++T ++ +V E 6 16764 0 7154760 0.0400086561294416 0.267 0.14 lcl|1 gi|62287761|gb|AAX78367.1| CDY [Pan troglodytes]: lcl|1 gi|62287761|gb|AAX78367.1| CDY [Pan troglodytes]: Warning: Composition-based score adjustment conditioned on sequence properties and unconditional composition-based score adjustment is not supported with PSSMs, resetting to default value of standard composition-based statistics