/* binTest.h was originally generated by the autoSql program, which also * generated binTest.c and binTest.sql. This header links the database and * the RAM representation of objects. */ #ifndef BINTEST_H #define BINTEST_H #define NONGENOMIC_NUM_COLS 3 struct nonGenomic /* A table with non-genomic data */ { struct nonGenomic *next; /* Next in singly linked list. */ unsigned key; /* Private key */ char *name; /* A name in any format */ char *address; /* Address in free format */ }; void nonGenomicStaticLoad(char **row, struct nonGenomic *ret); /* Load a row from nonGenomic table into ret. The contents of ret will * be replaced at the next call to this function. */ struct nonGenomic *nonGenomicLoad(char **row); /* Load a nonGenomic from row fetched with select * from nonGenomic * from database. Dispose of this with nonGenomicFree(). */ struct nonGenomic *nonGenomicLoadAll(char *fileName); /* Load all nonGenomic from whitespace-separated file. * Dispose of this with nonGenomicFreeList(). */ struct nonGenomic *nonGenomicLoadAllByChar(char *fileName, char chopper); /* Load all nonGenomic from chopper separated file. * Dispose of this with nonGenomicFreeList(). */ #define nonGenomicLoadAllByTab(a) nonGenomicLoadAllByChar(a, '\t'); /* Load all nonGenomic from tab separated file. * Dispose of this with nonGenomicFreeList(). */ struct nonGenomic *nonGenomicCommaIn(char **pS, struct nonGenomic *ret); /* Create a nonGenomic out of a comma separated string. * This will fill in ret if non-null, otherwise will * return a new nonGenomic */ void nonGenomicFree(struct nonGenomic **pEl); /* Free a single dynamically allocated nonGenomic such as created * with nonGenomicLoad(). */ void nonGenomicFreeList(struct nonGenomic **pList); /* Free a list of dynamically allocated nonGenomic's */ void nonGenomicOutput(struct nonGenomic *el, FILE *f, char sep, char lastSep); /* Print out nonGenomic. Separate fields with sep. Follow last field with lastSep. */ #define nonGenomicTabOut(el,f) nonGenomicOutput(el,f,'\t','\n'); /* Print out nonGenomic as a line in a tab-separated file. */ #define nonGenomicCommaOut(el,f) nonGenomicOutput(el,f,',',','); /* Print out nonGenomic as a comma separated list including final comma. */ #define ALREADYBINNED_NUM_COLS 6 struct alreadyBinned /* A table that already has chrom and bin */ { struct alreadyBinned *next; /* Next in singly linked list. */ unsigned bin; /* Browser speedup thing */ char *chrom; /* CHromosome */ int start; /* Start 0-based */ int end; /* End - non-inclusive */ char *name; /* What we are normally called */ unsigned id; /* What they use to look us up in database */ }; void alreadyBinnedStaticLoad(char **row, struct alreadyBinned *ret); /* Load a row from alreadyBinned table into ret. The contents of ret will * be replaced at the next call to this function. */ struct alreadyBinned *alreadyBinnedLoad(char **row); /* Load a alreadyBinned from row fetched with select * from alreadyBinned * from database. Dispose of this with alreadyBinnedFree(). */ struct alreadyBinned *alreadyBinnedLoadAll(char *fileName); /* Load all alreadyBinned from whitespace-separated file. * Dispose of this with alreadyBinnedFreeList(). */ struct alreadyBinned *alreadyBinnedLoadAllByChar(char *fileName, char chopper); /* Load all alreadyBinned from chopper separated file. * Dispose of this with alreadyBinnedFreeList(). */ #define alreadyBinnedLoadAllByTab(a) alreadyBinnedLoadAllByChar(a, '\t'); /* Load all alreadyBinned from tab separated file. * Dispose of this with alreadyBinnedFreeList(). */ struct alreadyBinned *alreadyBinnedCommaIn(char **pS, struct alreadyBinned *ret); /* Create a alreadyBinned out of a comma separated string. * This will fill in ret if non-null, otherwise will * return a new alreadyBinned */ void alreadyBinnedFree(struct alreadyBinned **pEl); /* Free a single dynamically allocated alreadyBinned such as created * with alreadyBinnedLoad(). */ void alreadyBinnedFreeList(struct alreadyBinned **pList); /* Free a list of dynamically allocated alreadyBinned's */ void alreadyBinnedOutput(struct alreadyBinned *el, FILE *f, char sep, char lastSep); /* Print out alreadyBinned. Separate fields with sep. Follow last field with lastSep. */ #define alreadyBinnedTabOut(el,f) alreadyBinnedOutput(el,f,'\t','\n'); /* Print out alreadyBinned as a line in a tab-separated file. */ #define alreadyBinnedCommaOut(el,f) alreadyBinnedOutput(el,f,',',','); /* Print out alreadyBinned as a comma separated list including final comma. */ #define NEEDBIN_NUM_COLS 6 struct needBin /* A table that already chrom but needs bin */ { struct needBin *next; /* Next in singly linked list. */ unsigned bin; /* Bin number for browser speedup */ char *chrom; /* Chromosome */ int start; /* Start 0-based */ int end; /* End - non-inclusive */ char *name; /* What we are normally called */ unsigned id; /* What they use to look us up in database */ }; void needBinStaticLoad(char **row, struct needBin *ret); /* Load a row from needBin table into ret. The contents of ret will * be replaced at the next call to this function. */ struct needBin *needBinLoad(char **row); /* Load a needBin from row fetched with select * from needBin * from database. Dispose of this with needBinFree(). */ struct needBin *needBinLoadAll(char *fileName); /* Load all needBin from whitespace-separated file. * Dispose of this with needBinFreeList(). */ struct needBin *needBinLoadAllByChar(char *fileName, char chopper); /* Load all needBin from chopper separated file. * Dispose of this with needBinFreeList(). */ #define needBinLoadAllByTab(a) needBinLoadAllByChar(a, '\t'); /* Load all needBin from tab separated file. * Dispose of this with needBinFreeList(). */ struct needBin *needBinCommaIn(char **pS, struct needBin *ret); /* Create a needBin out of a comma separated string. * This will fill in ret if non-null, otherwise will * return a new needBin */ void needBinFree(struct needBin **pEl); /* Free a single dynamically allocated needBin such as created * with needBinLoad(). */ void needBinFreeList(struct needBin **pList); /* Free a list of dynamically allocated needBin's */ void needBinOutput(struct needBin *el, FILE *f, char sep, char lastSep); /* Print out needBin. Separate fields with sep. Follow last field with lastSep. */ #define needBinTabOut(el,f) needBinOutput(el,f,'\t','\n'); /* Print out needBin as a line in a tab-separated file. */ #define needBinCommaOut(el,f) needBinOutput(el,f,',',','); /* Print out needBin as a comma separated list including final comma. */ /* -------------------------------- End autoSql Generated Code -------------------------------- */ #endif /* BINTEST_H */