Index of /kundaje/marinovg/oak/various/programs/htslib-1.10.2/test

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]auxf#values.sam2016-06-17 10:40 751  
[ ]auxf#values_java.cram2016-10-20 13:38 5.0K 
[ ]auxf.fa2014-12-20 14:53 29  
[ ]auxf.fa.fai2014-12-20 14:53 18  
[TXT]bgziptest.txt2016-09-01 13:22 15  
[ ]bgziptest.txt.gz2016-09-01 13:22 181  
[ ]bgziptest.txt.gz.gzi2016-09-01 13:22 88  
[ ]c1#bounds.sam2013-09-20 08:58 148  
[ ]c1#clip.sam2013-07-22 11:08 337  
[ ]c1#noseq.sam2015-04-08 15:41 433  
[ ]c1#pad1.sam2013-07-22 11:08 388  
[ ]c1#pad2.sam2015-02-18 10:27 527  
[ ]c1#pad3.sam2015-02-18 10:27 665  
[ ]c1#unknown.sam2015-03-10 15:05 429  
[ ]c1.fa2013-07-22 11:08 15  
[ ]c1.fa.fai2013-07-22 11:08 14  
[ ]c2#pad.sam2015-04-29 13:55 847  
[ ]c2.fa2015-04-29 14:19 14  
[ ]c2.fa.fai2015-04-29 14:24 12  
[ ]ce#1.sam2015-02-18 10:27 341  
[ ]ce#2.sam2015-02-18 10:27 645  
[ ]ce#5.sam2015-02-18 10:27 1.8K 
[ ]ce#5b.sam2015-02-18 10:27 1.8K 
[ ]ce#5b_java.cram2016-03-18 14:17 6.6K 
[ ]ce#1000.sam2018-03-09 11:50 315K 
[ ]ce#large_seq.sam2015-02-18 10:27 2.0M 
[ ]ce#supp.sam2015-04-08 16:32 547  
[ ]ce#tag_depadded.sam2015-02-18 10:27 1.6K 
[ ]ce#tag_padded.sam2015-02-18 10:27 1.6K 
[ ]ce#unmap.sam2013-07-22 11:08 1.3K 
[ ]ce#unmap1.sam2015-02-18 10:27 2.7K 
[ ]ce#unmap2.sam2015-02-18 10:27 5.4K 
[ ]ce.fa2013-07-22 11:08 1.0M 
[ ]ce.fa.fai2013-07-22 11:08 230  
[ ]colons.bam2018-06-07 10:50 268  
[ ]colons.bam.bai2018-06-07 10:50 424  
[TXT]compare_sam.pl2019-11-19 11:20 6.3K 
[TXT]cross_validate.sh2019-11-19 11:20 4.2K 
[ ]emptyfile2019-08-28 14:58 0  
[ ]faidx.fa2018-06-18 14:11 289  
[ ]fastqs.fq2018-05-21 14:09 47K 
[TXT]fastqs_README.txt2018-05-21 14:09 4.8K 
[ ]fieldarith2020-07-18 19:00 2.5M 
[TXT]fieldarith.c2019-11-19 11:20 2.4K 
[ ]fieldarith.o2020-07-18 19:00 18K 
[ ]fieldarith.sam2013-10-02 10:50 916  
[TXT]formatcols.vcf2016-02-04 11:35 240  
[TXT]formatmissing-out.vcf2016-09-09 09:11 226  
[TXT]formatmissing.vcf2016-09-09 09:11 226  
[DIR]fuzz/2020-07-18 19:00 -  
[TXT]header_syms.pl2019-10-28 19:44 3.5K 
[ ]hfile2020-07-18 19:00 2.5M 
[TXT]hfile.c2019-08-28 14:58 12K 
[ ]hfile.o2020-07-18 19:00 95K 
[ ]hts_endian2020-07-18 19:00 35K 
[TXT]hts_endian.c2018-07-04 13:32 17K 
[ ]hts_endian.o2020-07-18 19:00 65K 
[ ]index.bam.bai2019-01-30 14:48 776  
[ ]index.bam.csi2019-01-30 14:48 130  
[ ]index.bcf.csi2018-06-20 13:11 144  
[ ]index.cram.crai2019-01-30 14:48 83  
[ ]index.sam2019-01-30 14:48 53K 
[ ]index.sam.gz.bai2019-01-30 14:48 776  
[ ]index.sam.gz.csi2019-01-30 14:48 130  
[TXT]index.vcf2018-06-20 13:11 67K 
[ ]index.vcf.gz.csi2018-06-20 13:11 159  
[ ]index.vcf.gz.tbi2018-06-20 13:11 213  
[DIR]longrefs/2019-12-19 09:54 -  
[DIR]maintainer/2019-12-19 09:54 -  
[ ]md#1.sam2016-05-20 13:59 1.0K 
[ ]md.fa2016-05-20 13:59 45  
[ ]md.fa.fai2016-05-20 13:59 13  
[DIR]mpileup/2019-12-19 09:54 -  
[ ]no_hdr_sq_1.bam2019-07-04 15:43 1.7K 
[ ]no_hdr_sq_1.bam.csi2019-07-04 15:43 94  
[ ]no_hdr_sq_1.expected.sam2019-07-04 15:43 2.0K 
[TXT]noroundtrip-out.vcf2016-03-30 12:05 325  
[TXT]noroundtrip.vcf2016-03-30 12:05 271  
[ ]pileup2020-07-18 19:00 2.5M 
[TXT]pileup.c2019-11-19 11:20 6.8K 
[ ]pileup.o2020-07-18 19:00 35K 
[ ]range.bam2018-01-31 12:22 13K 
[ ]range.bam.bai2018-01-31 12:22 360  
[ ]range.cram2018-01-31 12:22 11K 
[ ]range.cram.crai2018-01-31 12:22 94  
[ ]range.out2018-01-31 12:22 3.4K 
[ ]realn01.fa2018-02-09 10:23 719  
[ ]realn01.fa.fai2018-02-09 10:23 21  
[ ]realn01.sam2018-02-09 10:23 1.8K 
[ ]realn01_exp-a.sam2018-02-09 10:23 2.1K 
[ ]realn01_exp-e.sam2018-02-09 10:23 2.1K 
[ ]realn01_exp.sam2018-02-09 10:23 2.1K 
[ ]realn02-r.sam2018-02-09 10:23 3.7K 
[ ]realn02.fa2018-02-09 10:23 4.2K 
[ ]realn02.fa.fai2018-02-09 10:23 17  
[ ]realn02.sam2018-02-09 10:23 2.8K 
[ ]realn02_exp-a.sam2018-02-09 10:23 3.7K 
[ ]realn02_exp-e.sam2018-02-09 10:23 3.7K 
[ ]realn02_exp.sam2018-02-09 10:23 3.7K 
[ ]sam2020-07-18 19:00 2.6M 
[TXT]sam.c2019-11-18 14:44 62K 
[ ]sam.o2020-07-18 19:00 265K 
[TXT]simple_test_driver.sh2019-11-19 11:20 5.5K 
[ ]tabix.out2019-04-18 15:36 98  
[DIR]tabix/2019-12-19 09:54 -  
[ ]test-bcf-sr2020-07-18 19:00 3.1M 
[TXT]test-bcf-sr.c2018-06-05 14:07 4.8K 
[ ]test-bcf-sr.o2020-07-18 19:00 55K 
[TXT]test-bcf-sr.pl2019-11-19 11:20 17K 
[ ]test-bcf-translate2020-07-18 19:00 2.9M 
[TXT]test-bcf-translate.c2019-11-19 11:20 8.7K 
[ ]test-bcf-translate.o2020-07-18 19:00 30K 
[ ]test-bcf-translate.out2017-08-29 09:56 869  
[TXT]test-logging.pl2017-05-14 21:20 2.5K 
[ ]test-parse-reg2020-07-18 19:00 2.5M 
[TXT]test-parse-reg.c2019-11-19 11:20 6.9K 
[ ]test-parse-reg.o2020-07-18 19:00 35K 
[ ]test-regidx2020-07-18 19:00 2.6M 
[TXT]test-regidx.c2019-11-06 11:28 16K 
[ ]test-regidx.o2020-07-18 19:00 82K 
[ ]test-vcf-api2020-07-18 19:00 3.0M 
[TXT]test-vcf-api.c2019-11-19 11:20 18K 
[ ]test-vcf-api.o2020-07-18 19:00 102K 
[ ]test-vcf-api.out2019-04-10 11:40 2.0K 
[TXT]test-vcf-hdr-in.vcf2016-03-24 11:32 2.0K 
[ ]test-vcf-hdr.out2016-03-24 11:32 1.3K 
[ ]test-vcf-sweep2020-07-18 19:00 3.0M 
[TXT]test-vcf-sweep.c2019-11-19 11:20 3.7K 
[ ]test-vcf-sweep.o2020-07-18 19:00 18K 
[ ]test-vcf-sweep.out2013-09-05 09:41 92  
[TXT]test.pl2019-12-10 17:59 35K 
[ ]test_bgzf2020-07-18 19:00 2.5M 
[TXT]test_bgzf.c2019-11-19 11:20 31K 
[ ]test_bgzf.o2020-07-18 19:00 132K 
[ ]test_index2020-07-18 19:00 2.9M 
[TXT]test_index.c2018-06-22 08:37 2.8K 
[ ]test_index.o2020-07-18 19:00 18K 
[ ]test_kstring2020-07-18 19:00 31K 
[TXT]test_kstring.c2019-04-17 17:37 5.6K 
[ ]test_kstring.o2020-07-18 19:00 54K 
[ ]test_realn2020-07-18 19:00 2.5M 
[TXT]test_realn.c2019-06-30 11:43 4.9K 
[ ]test_realn.o2020-07-18 19:00 32K 
[ ]test_str2int2020-07-18 19:00 27K 
[TXT]test_str2int.c2019-01-07 14:11 5.9K 
[ ]test_str2int.o2020-07-18 19:00 47K 
[ ]test_view2020-07-18 19:00 3.0M 
[TXT]test_view.c2019-11-19 11:20 14K 
[ ]test_view.o2020-07-18 19:00 100K 
[TXT]thrash_threads1.c2017-02-07 15:25 1.6K 
[TXT]thrash_threads2.c2017-02-07 15:25 1.6K 
[TXT]thrash_threads3.c2017-02-08 16:31 1.7K 
[TXT]thrash_threads4.c2017-02-07 15:25 2.2K 
[TXT]thrash_threads5.c2017-02-07 15:25 2.1K 
[TXT]thrash_threads6.c2017-02-08 16:31 3.3K 
[TXT]thrash_threads7.c2019-11-19 11:20 3.6K 
[TXT]thread_pool.md2017-03-03 19:48 2.9K 
[ ]xx#MD.sam2018-11-07 11:03 1.0K 
[ ]xx#MD2.sam2018-11-07 11:03 1.1K 
[ ]xx#blank.sam2019-08-28 14:58 71  
[ ]xx#large_aux.sam2013-07-22 11:08 884K 
[ ]xx#large_aux2.sam2013-07-22 11:08 651  
[ ]xx#large_aux_java.cram2016-03-18 14:17 22K 
[ ]xx#minimal.sam2013-07-22 11:08 254  
[ ]xx#pair.sam2013-07-22 11:08 304  
[ ]xx#repeated.sam2016-01-14 12:15 298  
[ ]xx#rg.sam2013-07-22 11:08 517  
[ ]xx#tlen.sam2015-04-29 13:55 1.0K 
[ ]xx#tlen2.sam2015-04-29 13:55 1.1K 
[ ]xx#triplet.sam2013-07-22 11:08 267  
[ ]xx#unsorted.sam2013-07-22 11:08 320  
[ ]xx.fa2018-11-07 11:03 86  
[ ]xx.fa.fai2018-11-07 11:03 44  
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