LICENSE
MANIFEST.in
README.md
pyproject.toml
setup.cfg
setup.py
HTSeq/StepVector.py
HTSeq/StretchVector.py
HTSeq/_HTSeq_internal.py
HTSeq/__init__.py
HTSeq/features.py
HTSeq/utils.py
HTSeq.egg-info/PKG-INFO
HTSeq.egg-info/SOURCES.txt
HTSeq.egg-info/dependency_links.txt
HTSeq.egg-info/entry_points.txt
HTSeq.egg-info/requires.txt
HTSeq.egg-info/top_level.txt
HTSeq/scripts/__init__.py
HTSeq/scripts/count.py
HTSeq/scripts/count_old.py
HTSeq/scripts/count_with_barcodes.py
HTSeq/scripts/qa.py
HTSeq/scripts/utils.py
HTSeq/scripts/count_features/__init__.py
HTSeq/scripts/count_features/count_features_per_file.py
HTSeq/scripts/count_features/reads_io_processor.py
HTSeq/scripts/count_features/reads_stats.py
src/AutoPyObjPtr.i
src/StepVector.i
src/StepVector.py
src/StepVector_wrap.cxx
src/_HTSeq.c
src/step_vector.h
src/HTSeq/_HTSeq.pxd
src/HTSeq/_HTSeq.pyx
src/HTSeq/__init__.py
test/test_general.py
test/test_genomic.py
test/test_htseq-count.py
test/test_parsers.py
test/test_stretch_vector.py