[external_tools]
sort: sort

[general]
# if set to max/2 (no quotes around)
# half the available processors will
# be used
default_proc_number: max/2

# temporary dir:
# deepTools bamCoverage, bamCompare and correctGCbias
# write files to a temporary dir before merging them
# and creating a final file. This can be speed up
# by writting to /dev/shm but for this a large
# physical memory of the server is required. If
# this is the case in your system, uncomment
# the following line. Otherwise, setting the
# variable to 'default', deepTools will use the
# temporary file configured in the system.
# Any other path that wants to be used for temporary
# files can by given as well (ie, /tmp)
#tmp_dir: /dev/shm
tmp_dir: default