# # Copyright (c) 2014 10X Genomics, Inc. All rights reserved. # """Sample index mappings.""" import sys # pylint: disable=too-many-lines,invalid-name # GemCode Tubes SI_001 = ["TCGCCATA", "GTATACAC", "AATGGTGG", "CGCATGCT"] SI_002 = ["TATCCTCG", "GCGAGGTC", "CGCTTCAA", "ATAGAAGT"] SI_003 = ["TGACGTCG", "CTTGTGTA", "ACGACCGT", "GACTAAAC"] SI_004 = ["ATCTAGCT", "GAGCGTAC", "TCAGCCTG", "CGTATAGA"] SI_005 = ["CCGTTCCC", "ATACAGTT", "TGTAGTAA", "GACGCAGG"] SI_006 = ["TCAATTGG", "AGTTAGAA", "GAGCGCTT", "CTCGCACC"] SI_007 = ["CTGCCTTG", "ACTAGCCC", "GGCTAGAT", "TAAGTAGA"] SI_008 = ["GGCAGAAA", "ACGGTTCT", "CATTCGTC", "TTACACGG"] # GemCode Plate SI_P01_A1 = ["TTGTAAGA", "GGCGTTTC", "CCTACCAT", "AAACGGCG"] SI_P01_B1 = ["CTAGCTGT", "GCCAACAA", "AGGCTACC", "TATTGGTG"] SI_P01_C1 = ["GATGCAGT", "AGACTTTC", "TTCTACAG", "CCGAGGCA"] SI_P01_D1 = ["AGCTGCGT", "GTGGAGCA", "TCTATTAG", "CAACCATC"] SI_P01_E1 = ["CGCCCGTA", "GTTTGCCT", "TAAGTTAG", "ACGAAAGC"] SI_P01_F1 = ["TGACTAGT", "GATAGGTA", "CCGTACAG", "ATCGCTCC"] SI_P01_G1 = ["CATATGCG", "ATGCGATT", "TCCGCTAC", "GGATACGA"] SI_P01_H1 = ["TCTTGTCC", "CGGGAGTA", "GTCACAGG", "AAACTCAT"] SI_P01_A2 = ["AGCCCTTT", "TCTTAGGC", "GTGAGAAG", "CAAGTCCA"] SI_P01_B2 = ["GGTCGAGC", "TTAGATTG", "CCCACCCA", "AAGTTGAT"] SI_P01_C2 = ["CCGAGAAC", "TGCTCTGT", "GTAGTGCG", "AATCACTA"] SI_P01_D2 = ["ACATTCCG", "GACACAAT", "CTGCGGTA", "TGTGATGC"] SI_P01_E2 = ["TCATCAAG", "GTTGGTCC", "AGGCTGGT", "CACAACTA"] SI_P01_F2 = ["TGCCCGCT", "GCAAACGC", "CATTGATA", "ATGGTTAG"] SI_P01_G2 = ["CGGTGAGC", "ATAACCTA", "TCCGAGCG", "GATCTTAT"] SI_P01_H2 = ["CCGAACTC", "AACGGTCA", "TTATTGGT", "GGTCCAAG"] SI_P01_A3 = ["AAAGCATA", "GCCTTTAT", "CTGCAGCC", "TGTAGCGG"] SI_P01_B3 = ["TCATCCTT", "ATTGGACG", "CAGCTTAC", "GGCAAGGA"] SI_P01_C3 = ["ACGTTACA", "TTACCTAC", "GACGACGG", "CGTAGGTT"] SI_P01_D3 = ["GAGCACGC", "CGAAGTTG", "TTCGTGAA", "ACTTCACT"] SI_P01_E3 = ["TCTGCAGG", "CGGCTCCA", "AACAAGTC", "GTATGTAT"] SI_P01_F3 = ["TTAGGACC", "AGTCTGTA", "GCCTCCGT", "CAGAATAG"] SI_P01_G3 = ["TACGAGTT", "ATGTCCAG", "GCTATAGC", "CGACGTCA"] SI_P01_H3 = ["TTGGGCTT", "GACAAACC", "ACACCTAA", "CGTTTGGG"] SI_P01_A4 = ["CATGGCAG", "AGAACGCC", "GTCTTTGA", "TCGCAATT"] SI_P01_B4 = ["GACAGGCT", "CCTCTAAC", "AGGGACTG", "TTATCTGA"] SI_P01_C4 = ["ACATTGGC", "GAGCCCAT", "CTTAGTCA", "TGCGAATG"] SI_P01_D4 = ["AAATCGTC", "GCGATCGG", "CTTCGAAT", "TGCGATCA"] SI_P01_E4 = ["GTAAACAT", "TATCCTGA", "AGCTGACG", "CCGGTGTC"] SI_P01_F4 = ["GCATGATA", "CGTCCTCT", "AACGACAC", "TTGATGGG"] SI_P01_G4 = ["CCTGCGGT", "GTACAACG", "AGCTTCTC", "TAGAGTAA"] SI_P01_H4 = ["TTCCATCT", "ACTGGAGC", "CGGTCGTG", "GAAATCAA"] SI_P01_A5 = ["CAGTCTGG", "TCACACTC", "ATTGGGAA", "GGCATACT"] SI_P01_B5 = ["TCATGCGA", "ATCGTACT", "CATCAGTG", "GGGACTAC"] SI_P01_C5 = ["TCAGTCAA", "CACTGACT", "ATGCATTC", "GGTACGGG"] SI_P01_D5 = ["GTCGACTC", "AGACGGAT", "CCTTTAGA", "TAGACTCG"] SI_P01_E5 = ["CCGTTGAA", "TATGCTCT", "ATCCAAGG", "GGAAGCTC"] SI_P01_F5 = ["TCTGACTA", "GTACGGCT", "CGGTTTAG", "AACACAGC"] SI_P01_G5 = ["ATGAAGTA", "GAAGCTCG", "TCTTTCGT", "CGCCGAAC"] SI_P01_H5 = ["ATAGTATG", "TATAAGGA", "GGCTCCAC", "CCGCGTCT"] SI_P01_A6 = ["CTTTCGAC", "ACGGGACT", "TGCATCTG", "GAACATGA"] SI_P01_B6 = ["GCGCACCT", "AACGCGAA", "CTATTTGG", "TGTAGATC"] SI_P01_C6 = ["CGCTCAGG", "GAGGTTTA", "ACTCAGAC", "TTAAGCCT"] SI_P01_D6 = ["GAAGTCTT", "TGCAGGGC", "ATGCCAAA", "CCTTATCG"] SI_P01_E6 = ["TGATGGCT", "GCCATTTG", "ATTGAAAC", "CAGCCCGA"] SI_P01_F6 = ["GACTTCCT", "TGAGGAAG", "ATGCCGGC", "CCTAATTA"] SI_P01_G6 = ["GTGCGACA", "TCAGTGTT", "AGCACTGG", "CATTACAC"] SI_P01_H6 = ["AAGCATAA", "CCCATCGC", "TTAGCGCT", "GGTTGATG"] SI_P01_A7 = ["CTCATCAT", "TAACGTCC", "AGGTCATA", "GCTGAGGG"] SI_P01_B7 = ["TCCACACG", "CTTCTGTT", "GAATGCAC", "AGGGATGA"] SI_P01_C7 = ["GGCGGAAT", "ACACCGGG", "CATAATCC", "TTGTTCTA"] SI_P01_D7 = ["CCGGATCC", "GGTCGCAT", "TTAACGTG", "AACTTAGA"] SI_P01_E7 = ["AAGACGTG", "CCATGTGT", "GTTCACAA", "TGCGTACC"] SI_P01_F7 = ["GGTTAGAC", "CAAACTTT", "ACCCGAGA", "TTGGTCCG"] SI_P01_G7 = ["GCCGGTAA", "TGACTGCC", "ATTACCGG", "CAGTAATT"] SI_P01_H7 = ["TGGCACGA", "AACGGGTG", "CTAATTCT", "GCTTCAAC"] SI_P01_A8 = ["GACTGTTC", "ATGATACG", "CCACAGAA", "TGTGCCGT"] SI_P01_B8 = ["ACGTTCAC", "TGCCCAGA", "CAAGGTCT", "GTTAAGTG"] SI_P01_C8 = ["TTTATCCC", "GCACGTTT", "CAGGAAGA", "AGCTCGAG"] SI_P01_D8 = ["AATCTTTG", "GGATGAGT", "CTCAAGAC", "TCGGCCCA"] SI_P01_E8 = ["GCTTACAT", "TAGGGTGC", "AGCCTATG", "CTAACGCA"] SI_P01_F8 = ["AGTTGGGA", "TACATTCT", "CCAGAAAG", "GTGCCCTC"] SI_P01_G8 = ["AAGTACTC", "GGAACTCT", "TCCCTGAG", "CTTGGAGA"] SI_P01_H8 = ["AAGAGCGG", "TCATAGCA", "GGCCCATC", "CTTGTTAT"] SI_P01_A9 = ["GAGTGCGT", "CTCCAACA", "ACAACTTG", "TGTGTGAC"] SI_P01_B9 = ["AAGCGTGT", "CTTGACCG", "TGATTAAC", "GCCACGTA"] SI_P01_C9 = ["AGATCGGT", "CATCGTCG", "GTCATATA", "TCGGACAC"] SI_P01_D9 = ["CAAGGGAC", "ACCTACTG", "GGGACACA", "TTTCTTGT"] SI_P01_E9 = ["AGTAAGCA", "TACCGCGG", "CCGGTAAT", "GTATCTTC"] SI_P01_F9 = ["AGTTAGTT", "GTACTTAA", "CACGCACG", "TCGAGCGC"] SI_P01_G9 = ["TTGACTTC", "GCCGAAGT", "CAATGGCA", "AGTCTCAG"] SI_P01_H9 = ["GGAATATG", "ACCTGCCA", "CTTCATAC", "TAGGCGGT"] SI_P01_A10 = ["ACAGCAAC", "TTTCGCGA", "CGCAATTT", "GAGTTGCG"] SI_P01_B10 = ["ACCATTAA", "CTGGACGT", "GAACGGTC", "TGTTCACG"] SI_P01_C10 = ["CGTGCTAA", "TCACTCCT", "ATCTGATC", "GAGAAGGG"] SI_P01_D10 = ["CTTATTTG", "GCGGGCAT", "AGATAACA", "TACCCGGC"] SI_P01_E10 = ["GCACCAGT", "CGCAGGAG", "TAGTACCA", "ATTGTTTC"] SI_P01_F10 = ["TCGACAAT", "GAATACTG", "ATTCGTGC", "CGCGTGCA"] SI_P01_G10 = ["CGGAGACT", "TCCTATGA", "ATACTGAG", "GATGCCTC"] SI_P01_H10 = ["GACCGCCA", "TCGAATTG", "ATTTCAGC", "CGAGTGAT"] SI_P01_A11 = ["CTTTCCTT", "TAGGTAAA", "ACCAGTCC", "GGACAGGG"] SI_P01_B11 = ["TCCAGATA", "GATTCGCT", "CGACATAG", "ATGGTCGC"] SI_P01_C11 = ["GTTTGTGG", "ACCGAACA", "TAGACGAC", "CGACTCTT"] SI_P01_D11 = ["GCTACTTC", "CACCTCAG", "ATATGAGA", "TGGGAGCT"] SI_P01_E11 = ["ATCGCCAT", "TCACGGTA", "GGGTTTCC", "CATAAAGG"] SI_P01_F11 = ["GAACCCGG", "AGCAGTTA", "TCGTAGAT", "CTTGTACC"] SI_P01_G11 = ["AGGGCGTT", "CTATACGC", "TACATAAG", "GCTCGTCA"] SI_P01_H11 = ["TCTCGACT", "AGGATCGA", "CACGATTC", "GTATCGAG"] SI_P01_A12 = ["TTATGGAA", "ACTACTGT", "CGGGAACG", "GACCTCTC"] SI_P01_B12 = ["GAAAGACA", "CGCTACAT", "ACGCTTGG", "TTTGCGTC"] SI_P01_C12 = ["TAAGCCAC", "CCGTTATG", "GGTAATGT", "ATCCGGCA"] SI_P01_D12 = ["GCTGTGTA", "AGAAACGT", "CACTCAAC", "TTGCGTCG"] SI_P01_E12 = ["CGCTATCC", "ACGCGGAA", "TAAATCGT", "GTTGCATG"] SI_P01_F12 = ["AATTGAAC", "TGGACCCT", "CCAGTGGA", "GTCCATTG"] SI_P01_G12 = ["CATGCGTA", "ACCCGCAC", "TGATATCG", "GTGATAGT"] SI_P01_H12 = ["TGTGTATA", "GTCCAGGC", "CAATCCCT", "ACGAGTAG"] # WGS+ Tubes SI_T2_1 = ["GGGTGATC", "TTACCGAT", "AATGACGA", "CCCATTCG"] SI_T2_2 = ["GGGTCGAA", "ATCCGCCC", "TCTATAGT", "CAAGATTG"] SI_T2_3 = ["GCTGATAT", "TGCCGAGC", "AAATTGCG", "CTGACCTA"] SI_T2_4 = ["ACTTCTGA", "TTCATCTT", "CGACGACG", "GAGGAGAC"] SI_T2_5 = ["GAATACAA", "AGCATACC", "TCGGGTTT", "CTTCCGGG"] SI_T2_6 = ["TATTGAGA", "GTAGTCAG", "CGCCATTC", "ACGACGCT"] SI_T2_7 = ["AAATCTGT", "GTCCAACC", "TCTGGCTG", "CGGATGAA"] SI_T2_8 = ["CCTTGAAC", "GAAATCGG", "TGGCCTCT", "ATCGAGTA"] SI_NA_A1 = SI_3A_A1 = SI_P03_A1 = ["AAACGGCG", "CCTACCAT", "GGCGTTTC", "TTGTAAGA"] SI_NA_B1 = SI_3A_B1 = SI_P03_B1 = ["AGGCTACC", "CTAGCTGT", "GCCAACAA", "TATTGGTG"] SI_NA_C1 = SI_3A_C1 = SI_P03_C1 = ["AGACTTTC", "CCGAGGCA", "GATGCAGT", "TTCTACAG"] SI_NA_D1 = SI_3A_D1 = SI_P03_D1 = ["AGCTGCGT", "CAACCATC", "GTGGAGCA", "TCTATTAG"] SI_NA_E1 = SI_3A_E1 = SI_P03_E1 = ["ACGAAAGC", "CGCCCGTA", "GTTTGCCT", "TAAGTTAG"] SI_NA_F1 = SI_3A_F1 = SI_P03_F1 = ["ATCGCTCC", "CCGTACAG", "GATAGGTA", "TGACTAGT"] SI_NA_G1 = SI_3A_G1 = SI_P03_G1 = ["ATGCGATT", "CATATGCG", "GGATACGA", "TCCGCTAC"] SI_NA_H1 = SI_3A_H1 = SI_P03_H1 = ["AAACTCAT", "CGGGAGTA", "GTCACAGG", "TCTTGTCC"] SI_NA_A2 = SI_3A_A2 = SI_P03_A2 = ["AGCCCTTT", "CAAGTCCA", "GTGAGAAG", "TCTTAGGC"] SI_NA_B2 = SI_3A_B2 = SI_P03_B2 = ["AAGTTGAT", "CCCACCCA", "GGTCGAGC", "TTAGATTG"] SI_NA_C2 = SI_3A_C2 = SI_P03_C2 = ["AATCACTA", "CCGAGAAC", "GTAGTGCG", "TGCTCTGT"] SI_NA_D2 = SI_3A_D2 = SI_P03_D2 = ["ACATTCCG", "CTGCGGTA", "GACACAAT", "TGTGATGC"] SI_NA_E2 = SI_3A_E2 = SI_P03_E2 = ["AGGCTGGT", "CACAACTA", "GTTGGTCC", "TCATCAAG"] SI_NA_F2 = SI_3A_F2 = SI_P03_F2 = ["ATGGTTAG", "CATTGATA", "GCAAACGC", "TGCCCGCT"] SI_NA_G2 = SI_3A_G2 = SI_P03_G2 = ["ATAACCTA", "CGGTGAGC", "GATCTTAT", "TCCGAGCG"] SI_NA_H2 = SI_3A_H2 = SI_P03_H2 = ["AACGGTCA", "CCGAACTC", "GGTCCAAG", "TTATTGGT"] SI_NA_A3 = SI_3A_A3 = SI_P03_A3 = ["AAAGCATA", "CTGCAGCC", "GCCTTTAT", "TGTAGCGG"] SI_NA_B3 = SI_3A_B3 = SI_P03_B3 = ["ATTGGACG", "CAGCTTAC", "GGCAAGGA", "TCATCCTT"] SI_NA_C3 = SI_3A_C3 = SI_P03_C3 = ["ACGTTACA", "CGTAGGTT", "GACGACGG", "TTACCTAC"] SI_NA_D3 = SI_3A_D3 = SI_P03_D3 = ["ACTTCACT", "CGAAGTTG", "GAGCACGC", "TTCGTGAA"] SI_NA_E3 = SI_3A_E3 = SI_P03_E3 = ["AACAAGTC", "CGGCTCCA", "GTATGTAT", "TCTGCAGG"] SI_NA_F3 = SI_3A_F3 = SI_P03_F3 = ["AGTCTGTA", "CAGAATAG", "GCCTCCGT", "TTAGGACC"] SI_NA_G3 = SI_3A_G3 = SI_P03_G3 = ["ATGTCCAG", "CGACGTCA", "GCTATAGC", "TACGAGTT"] SI_NA_H3 = SI_3A_H3 = SI_P03_H3 = ["ACACCTAA", "CGTTTGGG", "GACAAACC", "TTGGGCTT"] SI_NA_A4 = SI_3A_A4 = SI_P03_A4 = ["AGAACGCC", "CATGGCAG", "GTCTTTGA", "TCGCAATT"] SI_NA_B4 = SI_3A_B4 = SI_P03_B4 = ["AGGGACTG", "CCTCTAAC", "GACAGGCT", "TTATCTGA"] SI_NA_C4 = SI_3A_C4 = SI_P03_C4 = ["ACATTGGC", "CTTAGTCA", "GAGCCCAT", "TGCGAATG"] SI_NA_D4 = SI_3A_D4 = SI_P03_D4 = ["AAATCGTC", "CTTCGAAT", "GCGATCGG", "TGCGATCA"] SI_NA_E4 = SI_3A_E4 = SI_P03_E4 = ["AGCTGACG", "CCGGTGTC", "GTAAACAT", "TATCCTGA"] SI_NA_F4 = SI_3A_F4 = SI_P03_F4 = ["AACGACAC", "CGTCCTCT", "GCATGATA", "TTGATGGG"] SI_NA_G4 = SI_3A_G4 = SI_P03_G4 = ["AGCTTCTC", "CCTGCGGT", "GTACAACG", "TAGAGTAA"] SI_NA_H4 = SI_3A_H4 = SI_P03_H4 = ["ACTGGAGC", "CGGTCGTG", "GAAATCAA", "TTCCATCT"] SI_NA_A5 = SI_3A_A5 = SI_P03_A5 = ["ATTGGGAA", "CAGTCTGG", "GGCATACT", "TCACACTC"] SI_NA_B5 = SI_3A_B5 = SI_P03_B5 = ["ATCGTACT", "CATCAGTG", "GGGACTAC", "TCATGCGA"] SI_NA_C5 = SI_3A_C5 = SI_P03_C5 = ["ATGCATTC", "CACTGACT", "GGTACGGG", "TCAGTCAA"] SI_NA_D5 = SI_3A_D5 = SI_P03_D5 = ["AGACGGAT", "CCTTTAGA", "GTCGACTC", "TAGACTCG"] SI_NA_E5 = SI_3A_E5 = SI_P03_E5 = ["ATCCAAGG", "CCGTTGAA", "GGAAGCTC", "TATGCTCT"] SI_NA_F5 = SI_3A_F5 = SI_P03_F5 = ["AACACAGC", "CGGTTTAG", "GTACGGCT", "TCTGACTA"] SI_NA_G5 = SI_3A_G5 = SI_P03_G5 = ["ATGAAGTA", "CGCCGAAC", "GAAGCTCG", "TCTTTCGT"] SI_NA_H5 = SI_3A_H5 = SI_P03_H5 = ["ATAGTATG", "CCGCGTCT", "GGCTCCAC", "TATAAGGA"] SI_NA_A6 = SI_3A_A6 = SI_P03_A6 = ["ACGGGACT", "CTTTCGAC", "GAACATGA", "TGCATCTG"] SI_NA_B6 = SI_3A_B6 = SI_P03_B6 = ["AACGCGAA", "CTATTTGG", "GCGCACCT", "TGTAGATC"] SI_NA_C6 = SI_3A_C6 = SI_P03_C6 = ["ACTCAGAC", "CGCTCAGG", "GAGGTTTA", "TTAAGCCT"] SI_NA_D6 = SI_3A_D6 = SI_P03_D6 = ["ATGCCAAA", "CCTTATCG", "GAAGTCTT", "TGCAGGGC"] SI_NA_E6 = SI_3A_E6 = SI_P03_E6 = ["ATTGAAAC", "CAGCCCGA", "GCCATTTG", "TGATGGCT"] SI_NA_F6 = SI_3A_F6 = SI_P03_F6 = ["ATGCCGGC", "CCTAATTA", "GACTTCCT", "TGAGGAAG"] SI_NA_G6 = SI_3A_G6 = SI_P03_G6 = ["AGCACTGG", "CATTACAC", "GTGCGACA", "TCAGTGTT"] SI_NA_H6 = SI_3A_H6 = SI_P03_H6 = ["AAGCATAA", "CCCATCGC", "GGTTGATG", "TTAGCGCT"] SI_NA_A7 = SI_3A_A7 = SI_P03_A7 = ["AGGTCATA", "CTCATCAT", "GCTGAGGG", "TAACGTCC"] SI_NA_B7 = SI_3A_B7 = SI_P03_B7 = ["AGGGATGA", "CTTCTGTT", "GAATGCAC", "TCCACACG"] SI_NA_C7 = SI_3A_C7 = SI_P03_C7 = ["ACACCGGG", "CATAATCC", "GGCGGAAT", "TTGTTCTA"] SI_NA_D7 = SI_3A_D7 = SI_P03_D7 = ["AACTTAGA", "CCGGATCC", "GGTCGCAT", "TTAACGTG"] SI_NA_E7 = SI_3A_E7 = SI_P03_E7 = ["AAGACGTG", "CCATGTGT", "GTTCACAA", "TGCGTACC"] SI_NA_F7 = SI_3A_F7 = SI_P03_F7 = ["ACCCGAGA", "CAAACTTT", "GGTTAGAC", "TTGGTCCG"] SI_NA_G7 = SI_3A_G7 = SI_P03_G7 = ["ATTACCGG", "CAGTAATT", "GCCGGTAA", "TGACTGCC"] SI_NA_H7 = SI_3A_H7 = SI_P03_H7 = ["AACGGGTG", "CTAATTCT", "GCTTCAAC", "TGGCACGA"] SI_NA_A8 = SI_3A_A8 = SI_P03_A8 = ["ATGATACG", "CCACAGAA", "GACTGTTC", "TGTGCCGT"] SI_NA_B8 = SI_3A_B8 = SI_P03_B8 = ["ACGTTCAC", "CAAGGTCT", "GTTAAGTG", "TGCCCAGA"] SI_NA_C8 = SI_3A_C8 = SI_P03_C8 = ["AGCTCGAG", "CAGGAAGA", "GCACGTTT", "TTTATCCC"] SI_NA_D8 = SI_3A_D8 = SI_P03_D8 = ["AATCTTTG", "CTCAAGAC", "GGATGAGT", "TCGGCCCA"] SI_NA_E8 = SI_3A_E8 = SI_P03_E8 = ["AGCCTATG", "CTAACGCA", "GCTTACAT", "TAGGGTGC"] SI_NA_F8 = SI_3A_F8 = SI_P03_F8 = ["AGTTGGGA", "CCAGAAAG", "GTGCCCTC", "TACATTCT"] SI_NA_G8 = SI_3A_G8 = SI_P03_G8 = ["AAGTACTC", "CTTGGAGA", "GGAACTCT", "TCCCTGAG"] SI_NA_H8 = SI_3A_H8 = SI_P03_H8 = ["AAGAGCGG", "CTTGTTAT", "GGCCCATC", "TCATAGCA"] SI_NA_A9 = SI_3A_A9 = SI_P03_A9 = ["ACAACTTG", "CTCCAACA", "GAGTGCGT", "TGTGTGAC"] SI_NA_B9 = SI_3A_B9 = SI_P03_B9 = ["AAGCGTGT", "CTTGACCG", "GCCACGTA", "TGATTAAC"] SI_NA_C9 = SI_3A_C9 = SI_P03_C9 = ["AGATCGGT", "CATCGTCG", "GTCATATA", "TCGGACAC"] SI_NA_D9 = SI_3A_D9 = SI_P03_D9 = ["ACCTACTG", "CAAGGGAC", "GGGACACA", "TTTCTTGT"] SI_NA_E9 = SI_3A_E9 = SI_P03_E9 = ["AGTAAGCA", "CCGGTAAT", "GTATCTTC", "TACCGCGG"] SI_NA_F9 = SI_3A_F9 = SI_P03_F9 = ["AGTTAGTT", "CACGCACG", "GTACTTAA", "TCGAGCGC"] SI_NA_G9 = SI_3A_G9 = SI_P03_G9 = ["AGTCTCAG", "CAATGGCA", "GCCGAAGT", "TTGACTTC"] SI_NA_H9 = SI_3A_H9 = SI_P03_H9 = ["ACCTGCCA", "CTTCATAC", "GGAATATG", "TAGGCGGT"] SI_NA_A10 = SI_3A_A10 = SI_P03_A10 = ["ACAGCAAC", "CGCAATTT", "GAGTTGCG", "TTTCGCGA"] SI_NA_B10 = SI_3A_B10 = SI_P03_B10 = ["ACCATTAA", "CTGGACGT", "GAACGGTC", "TGTTCACG"] SI_NA_C10 = SI_3A_C10 = SI_P03_C10 = ["ATCTGATC", "CGTGCTAA", "GAGAAGGG", "TCACTCCT"] SI_NA_D10 = SI_3A_D10 = SI_P03_D10 = ["AGATAACA", "CTTATTTG", "GCGGGCAT", "TACCCGGC"] SI_NA_E10 = SI_3A_E10 = SI_P03_E10 = ["ATTGTTTC", "CGCAGGAG", "GCACCAGT", "TAGTACCA"] SI_NA_F10 = SI_3A_F10 = SI_P03_F10 = ["ATTCGTGC", "CGCGTGCA", "GAATACTG", "TCGACAAT"] SI_NA_G10 = SI_3A_G10 = SI_P03_G10 = ["ATACTGAG", "CGGAGACT", "GATGCCTC", "TCCTATGA"] SI_NA_H10 = SI_3A_H10 = SI_P03_H10 = ["ATTTCAGC", "CGAGTGAT", "GACCGCCA", "TCGAATTG"] SI_NA_A11 = SI_3A_A11 = SI_P03_A11 = ["ACCAGTCC", "CTTTCCTT", "GGACAGGG", "TAGGTAAA"] SI_NA_B11 = SI_3A_B11 = SI_P03_B11 = ["ATGGTCGC", "CGACATAG", "GATTCGCT", "TCCAGATA"] SI_NA_C11 = SI_3A_C11 = SI_P03_C11 = ["ACCGAACA", "CGACTCTT", "GTTTGTGG", "TAGACGAC"] SI_NA_D11 = SI_3A_D11 = SI_P03_D11 = ["ATATGAGA", "CACCTCAG", "GCTACTTC", "TGGGAGCT"] SI_NA_E11 = SI_3A_E11 = SI_P03_E11 = ["ATCGCCAT", "CATAAAGG", "GGGTTTCC", "TCACGGTA"] SI_NA_F11 = SI_3A_F11 = SI_P03_F11 = ["AGCAGTTA", "CTTGTACC", "GAACCCGG", "TCGTAGAT"] SI_NA_G11 = SI_3A_G11 = SI_P03_G11 = ["AGGGCGTT", "CTATACGC", "GCTCGTCA", "TACATAAG"] SI_NA_H11 = SI_3A_H11 = SI_P03_H11 = ["AGGATCGA", "CACGATTC", "GTATCGAG", "TCTCGACT"] SI_NA_A12 = SI_3A_A12 = SI_P03_A12 = ["ACTACTGT", "CGGGAACG", "GACCTCTC", "TTATGGAA"] SI_NA_B12 = SI_3A_B12 = SI_P03_B12 = ["ACGCTTGG", "CGCTACAT", "GAAAGACA", "TTTGCGTC"] SI_NA_C12 = SI_3A_C12 = SI_P03_C12 = ["ATCCGGCA", "CCGTTATG", "GGTAATGT", "TAAGCCAC"] SI_NA_D12 = SI_3A_D12 = SI_P03_D12 = ["AGAAACGT", "CACTCAAC", "GCTGTGTA", "TTGCGTCG"] SI_NA_E12 = SI_3A_E12 = SI_P03_E12 = ["ACGCGGAA", "CGCTATCC", "GTTGCATG", "TAAATCGT"] SI_NA_F12 = SI_3A_F12 = SI_P03_F12 = ["AATTGAAC", "CCAGTGGA", "GTCCATTG", "TGGACCCT"] SI_NA_G12 = SI_3A_G12 = SI_P03_G12 = ["ACCCGCAC", "CATGCGTA", "GTGATAGT", "TGATATCG"] SI_NA_H12 = SI_3A_H12 = SI_P03_H12 = ["ACGAGTAG", "CAATCCCT", "GTCCAGGC", "TGTGTATA"] # Chromium WGS Plate SI_GA_A1 = SI_P2_A1 = ["GGTTTACT", "CTAAACGG", "TCGGCGTC", "AACCGTAA"] SI_GA_A2 = SI_P2_A2 = ["TTTCATGA", "ACGTCCCT", "CGCATGTG", "GAAGGAAC"] SI_GA_A3 = SI_P2_A3 = ["CAGTACTG", "AGTAGTCT", "GCAGTAGA", "TTCCCGAC"] SI_GA_A4 = SI_P2_A4 = ["TATGATTC", "CCCACAGT", "ATGCTGAA", "GGATGCCG"] SI_GA_A5 = SI_P2_A5 = ["CTAGGTGA", "TCGTTCAG", "AGCCAATT", "GATACGCC"] SI_GA_A6 = SI_P2_A6 = ["CGCTATGT", "GCTGTCCA", "TTGAGATC", "AAACCGAG"] SI_GA_A7 = SI_P2_A7 = ["ACAGAGGT", "TATAGTTG", "CGGTCCCA", "GTCCTAAC"] SI_GA_A8 = SI_P2_A8 = ["GCATCTCC", "TGTAAGGT", "CTGCGATG", "AACGTCAA"] SI_GA_A9 = SI_P2_A9 = ["TCTTAAAG", "CGAGGCTC", "GTCCTTCT", "AAGACGGA"] SI_GA_A10 = SI_P2_A10 = ["GAAACCCT", "TTTCTGTC", "CCGTGTGA", "AGCGAAAG"] SI_GA_A11 = SI_P2_A11 = ["GTCCGGTC", "AAGATCAT", "CCTGAAGG", "TGATCTCA"] SI_GA_A12 = SI_P2_A12 = ["AGTGGAAC", "GTCTCCTT", "TCACATCA", "CAGATGGG"] SI_GA_B1 = SI_P2_B1 = ["GTAATCTT", "TCCGGAAG", "AGTTCGGC", "CAGCATCA"] SI_GA_B2 = SI_P2_B2 = ["TACTCTTC", "CCTGTGCG", "GGACACGT", "ATGAGAAA"] SI_GA_B3 = SI_P2_B3 = ["GTGTATTA", "TGTGCGGG", "ACCATAAC", "CAACGCCT"] SI_GA_B4 = SI_P2_B4 = ["ACTTCATA", "GAGATGAC", "TGCCGTGG", "CTAGACCT"] SI_GA_B5 = SI_P2_B5 = ["AATAATGG", "CCAGGGCA", "TGCCTCAT", "GTGTCATC"] SI_GA_B6 = SI_P2_B6 = ["CGTTAATC", "GCCACGCT", "TTACTCAG", "AAGGGTGA"] SI_GA_B7 = SI_P2_B7 = ["AAACCTCA", "GCCTTGGT", "CTGGACTC", "TGTAGAAG"] SI_GA_B8 = SI_P2_B8 = ["AAAGTGCT", "GCTACCTG", "TGCTGTAA", "CTGCAAGC"] SI_GA_B9 = SI_P2_B9 = ["CTGTAACT", "TCTAGCGA", "AGAGTGTG", "GACCCTAC"] SI_GA_B10 = SI_P2_B10 = ["ACCGTATG", "GATTAGAT", "CTGACTGA", "TGACGCCC"] SI_GA_B11 = SI_P2_B11 = ["GTTCCTCA", "AGGTACGC", "TAAGTATG", "CCCAGGAT"] SI_GA_B12 = SI_P2_B12 = ["TACCACCA", "CTAAGTTT", "GGGTCAAG", "ACTGTGGC"] SI_GA_C1 = SI_P2_C1 = ["CCACTTAT", "AACTGGCG", "TTGGCATA", "GGTAACGC"] SI_GA_C2 = SI_P2_C2 = ["CCTAGACC", "ATCTCTGT", "TAGCTCTA", "GGAGAGAG"] SI_GA_C3 = SI_P2_C3 = ["TCAGCCGT", "CAGAGGCC", "GGTCAATA", "ATCTTTAG"] SI_GA_C4 = SI_P2_C4 = ["ACAATTCA", "TGCGCAGC", "CATCACTT", "GTGTGGAG"] SI_GA_C5 = SI_P2_C5 = ["CGACTTGA", "TACAGACT", "ATTGCGTG", "GCGTACAC"] SI_GA_C6 = SI_P2_C6 = ["ATTACTTC", "TGCGAACT", "GCATTCGG", "CAGCGGAA"] SI_GA_C7 = SI_P2_C7 = ["GTCTCTCG", "AATCTCTC", "CGGAGGGA", "TCAGAAAT"] SI_GA_C8 = SI_P2_C8 = ["GTTGAGAA", "AGATCTGG", "TCGATACT", "CACCGCTC"] SI_GA_C9 = SI_P2_C9 = ["GCGCAGAA", "ATCTTACC", "TATGGTGT", "CGAACCTG"] SI_GA_C10 = SI_P2_C10 = ["TCTCAGTG", "GAGACTAT", "CGCTTAGC", "ATAGGCCA"] SI_GA_C11 = SI_P2_C11 = ["GAGGATCT", "AGACCATA", "TCCTGCGC", "CTTATGAG"] SI_GA_C12 = SI_P2_C12 = ["TCTCGTTT", "GGCTAGCG", "ATGACCGC", "CAAGTAAA"] SI_GA_D1 = SI_P2_D1 = ["CACTCGGA", "GCTGAATT", "TGAAGTAC", "ATGCTCCG"] SI_GA_D2 = SI_P2_D2 = ["TAACAAGG", "GGTTCCTC", "ATCATGCA", "CCGGGTAT"] SI_GA_D3 = SI_P2_D3 = ["ACATTACT", "TTTGGGTA", "CAGCCCAC", "GGCAATGG"] SI_GA_D4 = SI_P2_D4 = ["CCCTAACA", "ATTCCGAT", "TGGATTGC", "GAAGGCTG"] SI_GA_D5 = SI_P2_D5 = ["CTCGTCAC", "GATCAGCA", "ACAACAGG", "TGGTGTTT"] SI_GA_D6 = SI_P2_D6 = ["CATGCGAT", "TGATATTC", "GTGATCGA", "ACCCGACG"] SI_GA_D7 = SI_P2_D7 = ["ATTTGCTA", "TAGACACC", "CCACAGGG", "GGCGTTAT"] SI_GA_D8 = SI_P2_D8 = ["GCAACAAA", "TAGTTGTC", "CGCCATCG", "ATTGGCGT"] SI_GA_D9 = SI_P2_D9 = ["AGGAGATG", "GATGTGGT", "CTACATCC", "TCCTCCAA"] SI_GA_D10 = SI_P2_D10 = ["CAATACCC", "TGTCTATG", "ACCACGAA", "GTGGGTGT"] SI_GA_D11 = SI_P2_D11 = ["CTTTGCGG", "TGCACAAA", "AAGCAGTC", "GCAGTTCT"] SI_GA_D12 = SI_P2_D12 = ["GCACAATG", "CTTGGTAC", "TGCACCGT", "AAGTTGCA"] SI_GA_E1 = SI_P2_E1 = ["TGGTAAAC", "GAAAGGGT", "ACTGCTCG", "CTCCTCTA"] SI_GA_E2 = SI_P2_E2 = ["GTGGTACC", "TACTATAG", "ACAAGGTA", "CGTCCCGT"] SI_GA_E3 = SI_P2_E3 = ["AGGTATTG", "CTCCTAGT", "TCAAGGCC", "GATGCCAA"] SI_GA_E4 = SI_P2_E4 = ["TTCGCCCT", "GGATGGGC", "AATCAATG", "CCGATTAA"] SI_GA_E5 = SI_P2_E5 = ["CATTAGCG", "TTCGCTGA", "ACAAGAAT", "GGGCTCTC"] SI_GA_E6 = SI_P2_E6 = ["CTGCGGCT", "GACTCAAA", "AGAAACTC", "TCTGTTGG"] SI_GA_E7 = SI_P2_E7 = ["CACGCCTT", "GTATATAG", "TCTCGGGC", "AGGATACA"] SI_GA_E8 = SI_P2_E8 = ["ATAGTTAC", "TGCTGAGT", "CCTACGTA", "GAGCACCG"] SI_GA_E9 = SI_P2_E9 = ["TTGTTTCC", "GGAGGAGG", "CCTAACAA", "AACCCGTT"] SI_GA_E10 = SI_P2_E10 = ["AAATGTGC", "GGGCAAAT", "TCTATCCG", "CTCGCGTA"] SI_GA_E11 = SI_P2_E11 = ["AAGCGCTG", "CGTTTGAT", "GTAGCACA", "TCCAATGC"] SI_GA_E12 = SI_P2_E12 = ["ACCGGCTC", "GAGTTAGT", "CGTCCTAG", "TTAAAGCA"] SI_GA_F1 = SI_P2_F1 = ["GTTGCAGC", "TGGAATTA", "CAATGGAG", "ACCCTCCT"] SI_GA_F2 = SI_P2_F2 = ["TTTACATG", "CGCGATAC", "ACGCGGGT", "GAATTCCA"] SI_GA_F3 = SI_P2_F3 = ["TTCAGGTG", "ACGGACAT", "GATCTTGA", "CGATCACC"] SI_GA_F4 = SI_P2_F4 = ["CCCAATAG", "GTGTCGCT", "AGAGTCGC", "TATCGATA"] SI_GA_F5 = SI_P2_F5 = ["GACTACGT", "CTAGCGAG", "TCTATATC", "AGGCGTCA"] SI_GA_F6 = SI_P2_F6 = ["CGGAGCAC", "GACCTATT", "ACTTAGGA", "TTAGCTCG"] SI_GA_F7 = SI_P2_F7 = ["CGTGCAGA", "AACAAGAT", "TCGCTTCG", "GTATGCTC"] SI_GA_F8 = SI_P2_F8 = ["CATGAACA", "TCACTCGC", "AGCTGGAT", "GTGACTTG"] SI_GA_F9 = SI_P2_F9 = ["CAAGCTCC", "GTTCACTG", "TCGTGAAA", "AGCATGGT"] SI_GA_F10 = SI_P2_F10 = ["GCTTGGCT", "AAACAAAC", "CGGGCTTA", "TTCATCGG"] SI_GA_F11 = SI_P2_F11 = ["GCGAGAGT", "TACGTTCA", "AGTCCCAC", "CTATAGTG"] SI_GA_F12 = SI_P2_F12 = ["TGATGCAT", "GCTACTGA", "CACCTGCC", "ATGGAATG"] SI_GA_G1 = SI_P2_G1 = ["ATGAATCT", "GATCTCAG", "CCAGGAGC", "TGCTCGTA"] SI_GA_G2 = SI_P2_G2 = ["TGATTCTA", "ACTAGGAG", "CAGCCACT", "GTCGATGC"] SI_GA_G3 = SI_P2_G3 = ["CCTCATTC", "AGCATCCG", "GTGGCAAT", "TAATGGGA"] SI_GA_G4 = SI_P2_G4 = ["GCGATGTG", "AGATACAA", "TTTCCACT", "CACGGTGC"] SI_GA_G5 = SI_P2_G5 = ["GAGCAAGA", "TCTGTGAT", "CGCAGTTC", "ATATCCCG"] SI_GA_G6 = SI_P2_G6 = ["CTGACGCG", "GGTCGTAC", "TCCTTCTT", "AAAGAAGA"] SI_GA_G7 = SI_P2_G7 = ["GGTATGCA", "CTCGAAAT", "ACACCTTC", "TAGTGCGG"] SI_GA_G8 = SI_P2_G8 = ["TATGAGCT", "CCGATAGC", "ATACCCAA", "GGCTGTTG"] SI_GA_G9 = SI_P2_G9 = ["TAGGACGT", "ATCCCACA", "GGAATGTC", "CCTTGTAG"] SI_GA_G10 = SI_P2_G10 = ["TCGCCAGC", "AATGTTAG", "CGATAGCT", "GTCAGCTA"] SI_GA_G11 = SI_P2_G11 = ["TTATCGTT", "AGCAGAGC", "CATCTCCA", "GCGGATAG"] SI_GA_G12 = SI_P2_G12 = ["ATTCTAAG", "CCCGATTA", "TGGAGGCT", "GAATCCGC"] SI_GA_H1 = SI_P2_H1 = ["GTATGTCA", "TGTCAGAC", "CACGTCGG", "ACGACATT"] SI_GA_H2 = SI_P2_H2 = ["TAATGACC", "ATGCCTTA", "GCCGAGAT", "CGTATCGG"] SI_GA_H3 = SI_P2_H3 = ["CCAAGATG", "AGGCCCGA", "TACGTGAC", "GTTTATCT"] SI_GA_H4 = SI_P2_H4 = ["GCCATTCC", "CAAGAATT", "TTGCCGGA", "AGTTGCAG"] SI_GA_H5 = SI_P2_H5 = ["CCACTACA", "GATTCTGG", "TGCGGCTT", "ATGAAGAC"] SI_GA_H6 = SI_P2_H6 = ["TAGGATAA", "CCTTTGTC", "GTACGCGG", "AGCACACT"] SI_GA_H7 = SI_P2_H7 = ["AGCTATCA", "CATATAAC", "TCAGGGTG", "GTGCCCGT"] SI_GA_H8 = SI_P2_H8 = ["TTGTTGAT", "GCTCAACC", "CAAAGTGG", "AGCGCCTA"] SI_GA_H9 = SI_P2_H9 = ["ACACTGTT", "CAGGATGG", "GGCTGAAC", "TTTACCCA"] SI_GA_H10 = SI_P2_H10 = ["GTAATTGC", "AGTCGCTT", "CACGAGAA", "TCGTCACG"] SI_GA_H11 = SI_P2_H11 = ["GGCGAGTA", "ACTTCTAT", "CAAATACG", "TTGCGCGC"] SI_GA_H12 = SI_P2_H12 = ["GACAGCAT", "TTTGTACA", "AGGCCGTG", "CCATATGC"] # Dual indexing plate: i7, then i5 (use the workflow A i5 sequence) # TT plate SI_TT_A1 = ["GTAACATGCG", "AGTGTTACCT"] SI_TT_A2 = ["GTGGATCAAA", "GCCAACCCTG"] SI_TT_A3 = ["CACTACGAAA", "TTAGACTGAT"] SI_TT_A4 = ["CTCTAGCGAG", "TATCTTCATC"] SI_TT_A5 = ["GTAGCCCTGT", "GAGCATCTAT"] SI_TT_A6 = ["TAACGCGTGA", "CCCTAACTTC"] SI_TT_A7 = ["TCCCAAGGGT", "TACTACCTTT"] SI_TT_A8 = ["CGAAGTATAC", "GAACTTGGAG"] SI_TT_A9 = ["AAGTGGAGAG", "TTCCTGTTAC"] SI_TT_A10 = ["CGTGACATGC", "ATGGTCTAAA"] SI_TT_A11 = ["CGGAACCCAA", "GATTCGAGGA"] SI_TT_A12 = ["CACCGCACCA", "GACTGTCAAT"] SI_TT_B1 = ["ACAGTAACTA", "ACAGTTCGTT"] SI_TT_B2 = ["TCTACCATTT", "CGGGAGAGTC"] SI_TT_B3 = ["CACGGTGAAT", "GTTCGTCACA"] SI_TT_B4 = ["GTAGACGAAA", "CTAGTGTGGT"] SI_TT_B5 = ["TCGGCTCTAC", "CCGATGGTCT"] SI_TT_B6 = ["AATGCCATGA", "TACGTAATGC"] SI_TT_B7 = ["GCCTTCGGTA", "CCAACGATTT"] SI_TT_B8 = ["GCACTGAGAA", "TATGCGTGAA"] SI_TT_B9 = ["TATTGAGGCA", "CAGGTAAGTG"] SI_TT_B10 = ["GCCCGATGGA", "AATCGTCTAG"] SI_TT_B11 = ["TCTTACTTGC", "TGACCTCTAG"] SI_TT_B12 = ["CGTCAAGGGC", "TAGGTCACTC"] SI_TT_C1 = ["TGCGCGGTTT", "CAAGGATAAA"] SI_TT_C2 = ["CAATCCCGAC", "CCGAGTAGTA"] SI_TT_C3 = ["ATGGCTTGTG", "GAATGTTGTG"] SI_TT_C4 = ["TTCTCGATGA", "TGTCGGGCAC"] SI_TT_C5 = ["TCCGTTGGAT", "ACGTTCTCGC"] SI_TT_C6 = ["ACGACTACCA", "ACGACCCTAA"] SI_TT_C7 = ["CGCGCACTTA", "CCTGTATTCT"] SI_TT_C8 = ["GCTACAAAGC", "CACGTGCCCT"] SI_TT_C9 = ["TATCAGCCTA", "GTTTCGTCCT"] SI_TT_C10 = ["AGAATGGTTT", "GAGGGTGGGA"] SI_TT_C11 = ["ATGGGTGAAA", "CTTGGGAATT"] SI_TT_C12 = ["TCGTCAAGAT", "GCAACTCAGG"] SI_TT_D1 = ["TGCAATGTTC", "GCTTGTCGAA"] SI_TT_D2 = ["TTAATACGCG", "CACCTCGGGT"] SI_TT_D3 = ["CCTTCTAGAG", "AATACAACGA"] SI_TT_D4 = ["GCAGTATAGG", "TTCCGTGCAC"] SI_TT_D5 = ["TGGTTCGGGT", "GTGGCAGGAG"] SI_TT_D6 = ["CCCAGCTTCT", "GACACCAAAC"] SI_TT_D7 = ["CCTGTCAGGG", "AGCCCGTAAC"] SI_TT_D8 = ["CGCTGAAATC", "AGGTGTCTGC"] SI_TT_D9 = ["TGGTCCCAAG", "CCTCTGGCGT"] SI_TT_D10 = ["ATGCGAATGG", "ACAAGTGTCG"] SI_TT_D11 = ["CGAATATTCG", "CTGGAAGCAA"] SI_TT_D12 = ["GAATTGGTTA", "ACTCTAGTAG"] SI_TT_E1 = ["TTATTCGAGG", "CTGTCCTGCT"] SI_TT_E2 = ["ATGGAGGGAG", "ATAACCCATT"] SI_TT_E3 = ["ACCAGACAAC", "AGGAACTAGG"] SI_TT_E4 = ["AACCACGCAT", "ATTCAGGTTA"] SI_TT_E5 = ["CGCGGTAGGT", "CAGGATGTTG"] SI_TT_E6 = ["TTGAGAGTCA", "AACCTGGTAG"] SI_TT_E7 = ["GTCCTTCGGC", "TCATGCACAG"] SI_TT_E8 = ["GAGCAAGGGC", "ATTGACTTGG"] SI_TT_E9 = ["TGTCCCAACG", "TCGATGTCCA"] SI_TT_E10 = ["CACAATCCCA", "ATATCCACAA"] SI_TT_E11 = ["TCCGGGACAA", "GTGAATGCCA"] SI_TT_E12 = ["CGTCCACCTG", "CATTCATGAC"] SI_TT_F1 = ["AAGATTGGAT", "AGCGGGATTT"] SI_TT_F2 = ["AAGGGCCGCA", "CTGATTCCTC"] SI_TT_F3 = ["GAGAGGATAT", "TTGAAATGGG"] SI_TT_F4 = ["CCCACCACAA", "ACCTCCGCTT"] SI_TT_F5 = ["CGGCTGGATG", "TGATAAGCAC"] SI_TT_F6 = ["TTGCCCGTGC", "GCGTGAGATT"] SI_TT_F7 = ["AATGTATCCA", "AATGAGCTTA"] SI_TT_F8 = ["CTCCTTTAGA", "GACATAGCTC"] SI_TT_F9 = ["GTCCCATCAA", "CGAACGTGAC"] SI_TT_F10 = ["CCGGCAACTG", "CGGTTTAACA"] SI_TT_F11 = ["TTCACACCTT", "TAGTGTACAC"] SI_TT_F12 = ["GAGACGCACG", "CTATGAACAT"] SI_TT_G1 = ["TGTAGTCATT", "CTTGATCGTA"] SI_TT_G2 = ["CATGTGGGTT", "GATTCCTTTA"] SI_TT_G3 = ["ATGACGTCGC", "AGGTCAGGAT"] SI_TT_G4 = ["GCGCTTATGG", "GCCTGGCTAG"] SI_TT_G5 = ["ATAGGGCGAG", "TGCATCGAGT"] SI_TT_G6 = ["GCGGGTAAGT", "TAGCACTAAG"] SI_TT_G7 = ["GTTTCACGAT", "TTCGGCCAAA"] SI_TT_G8 = ["TAAGCAACTG", "CTATACTCAA"] SI_TT_G9 = ["CCGGAGGAAG", "TGCGGATGTT"] SI_TT_G10 = ["ACTTTACGTG", "TGAACGCCCT"] SI_TT_G11 = ["GATAACCTGC", "CATTAGAAAC"] SI_TT_G12 = ["CTTGCATAAA", "ATCAGGGCTT"] SI_TT_H1 = ["ACAATGTGAA", "CGTACCGTTA"] SI_TT_H2 = ["TAGCATAGTG", "CGGCTCTGTC"] SI_TT_H3 = ["CCCGTTCTCG", "GACGGATTGG"] SI_TT_H4 = ["AGTTTCCTGG", "TGCCACACAG"] SI_TT_H5 = ["AGCAAGAAGC", "TTGTGTTTCT"] SI_TT_H6 = ["CCTATCCTCG", "GAATACTAAC"] SI_TT_H7 = ["ACCTCGAGCT", "TGTGTTCGAT"] SI_TT_H8 = ["ATAAGGATAC", "ATAGATAGGG"] SI_TT_H9 = ["AGAACTTAGA", "CGAGTCCTTT"] SI_TT_H10 = ["TTATCTAGGG", "AAAGGCTCTA"] SI_TT_H11 = ["ACAATCGATC", "TGACGGAATG"] SI_TT_H12 = ["TGATGATTCA", "GTAGGAGTCG"] # TN plate SI_TN_A1 = ["AGTATCTGCA", "TCGCTAGCGA"] SI_TN_A2 = ["TCTATGAGTG", "CAACCAACGA"] SI_TN_A3 = ["TTATTGACAC", "GCGAACTGAT"] SI_TN_A4 = ["GAACAACCTT", "GAACTGGTAC"] SI_TN_A5 = ["TCTCGAATGT", "ACGATCGCGA"] SI_TN_A6 = ["TTTGCTGGGT", "CAAATTCCGG"] SI_TN_A7 = ["TCCGAATAAA", "ATGCTACCGC"] SI_TN_A8 = ["GTTTGAAAGT", "GTACGCCATG"] SI_TN_A9 = ["GCACGTGACA", "AGGAAGTCTG"] SI_TN_A10 = ["GTCGTTGCCT", "AGAACTTCTT"] SI_TN_A11 = ["TCGTACGATG", "ACCCTCCCAT"] SI_TN_A12 = ["CGCGAGTAGG", "CCTGGTGACA"] SI_TN_B1 = ["CATAGCATGA", "GACCTGCCTG"] SI_TN_B2 = ["TACTGCAATA", "AGAGTCCATG"] SI_TN_B3 = ["TGGCTACCGG", "CTGAGTCATT"] SI_TN_B4 = ["ACGTTTGATT", "TACTGAGAGA"] SI_TN_B5 = ["TGGGTGCACA", "CATGCATCAT"] SI_TN_B6 = ["ACGAGCGGAA", "AACAACTAAG"] SI_TN_B7 = ["CCATTGTAAG", "TACGAATTGA"] SI_TN_B8 = ["TAGTAGTTTG", "TCATCGGGCG"] SI_TN_B9 = ["GATGGAAGGT", "AAATTGAGCA"] SI_TN_B10 = ["ACAGGTTACG", "AGATAAACAG"] SI_TN_B11 = ["AGTAGTTTGG", "ATAGCATGCA"] SI_TN_B12 = ["TCGCCATTTG", "ACGGGCATGT"] SI_TN_C1 = ["AAGGGTTTAC", "TACTCACGCG"] SI_TN_C2 = ["GCTTAAGCAA", "GCCTACCGAA"] SI_TN_C3 = ["GTGATCTGGG", "ACTGTGTCGC"] SI_TN_C4 = ["ATGCAAGATC", "ACGCCTCTGA"] SI_TN_C5 = ["TCAAAGGGTT", "GATTACTGAG"] SI_TN_C6 = ["TCAAGTAAAG", "CAGTGCTGTT"] SI_TN_C7 = ["GCTGCTCCCA", "CTACAGGGTC"] SI_TN_C8 = ["ATCTGTAGTT", "AGGCCCAATG"] SI_TN_C9 = ["ATGGCGCAAA", "CGATGCAAGC"] SI_TN_C10 = ["TAATGGGCAA", "GCGCATAGGC"] SI_TN_C11 = ["TAACTGTAGT", "ATGACCGATA"] SI_TN_C12 = ["AGCCTTCTCT", "CTGTCCGCGT"] SI_TN_D1 = ["AGCGCCTTGC", "GTACGAAGTG"] SI_TN_D2 = ["CAGTAATACA", "TTGAGCTGAG"] SI_TN_D3 = ["ATAGAACCAC", "CTAACCTAAC"] SI_TN_D4 = ["TTACAATCGT", "CAGATTGTAC"] SI_TN_D5 = ["CTGCCTGGGT", "GACCAATAGC"] SI_TN_D6 = ["GAAAGCGCGC", "GAAACATATC"] SI_TN_D7 = ["TGTTCGCGAA", "TCGTGAAATA"] SI_TN_D8 = ["GCGTAACGAT", "ATTCGTTCAA"] SI_TN_D9 = ["TGTCAGTAAG", "AGATGACATC"] SI_TN_D10 = ["CTACGTAGGT", "GTCCCACTTA"] SI_TN_D11 = ["CCTAGGCAAA", "CAGAAATATC"] SI_TN_D12 = ["TTAACGGACG", "CAAACGTCGC"] SI_TN_E1 = ["GTCATCCTAT", "CTAGGGCAAA"] SI_TN_E2 = ["CGACCCAGTG", "TCGCACCAAC"] SI_TN_E3 = ["CATAGTTCGC", "TTTCGTAACT"] SI_TN_E4 = ["TCACGTTGGG", "CTTTGCTCCA"] SI_TN_E5 = ["TAATCTTCGG", "AGCCATCAAT"] SI_TN_E6 = ["CCATCACCAC", "GTGATCCCAA"] SI_TN_E7 = ["CCATTAGGCG", "GCATTTCATC"] SI_TN_E8 = ["CTGGTGATAA", "AGGGACCTGG"] SI_TN_E9 = ["CGTTGGTCCG", "GTAGCTGATA"] SI_TN_E10 = ["CTTCCTACTT", "TCCTCCTGTA"] SI_TN_E11 = ["AGACGCATCT", "TTGTACGTGG"] SI_TN_E12 = ["TCGGGAGCTG", "CCAGACTGCA"] SI_TN_F1 = ["CCTGGCTATA", "CCCTCACAAA"] SI_TN_F2 = ["ACTTGTTCGA", "TGGATGGGTG"] SI_TN_F3 = ["AACCATTAGT", "GTATGTCGGG"] SI_TN_F4 = ["TTGCGGGACT", "TGAGGATCGC"] SI_TN_F5 = ["GAGCGAAAGC", "TCCTTACCAA"] SI_TN_F6 = ["AGCATCACAT", "TCGTAGAGGA"] SI_TN_F7 = ["ACCATTGCAC", "ACAGTTAAGC"] SI_TN_F8 = ["GTTCTGGAAC", "CGGGTACTGG"] SI_TN_F9 = ["CGGACGACCT", "GTTGCGCCTC"] SI_TN_F10 = ["TGGACCTTTG", "TAAATCTCTG"] SI_TN_F11 = ["TCATATGTGA", "AAAGTGTTCT"] SI_TN_F12 = ["CGCCCTCATC", "GCGTCTACGC"] SI_TN_G1 = ["TCATCGTTCT", "AATTCGGGAA"] SI_TN_G2 = ["GCACTACTGA", "CACTACGGTT"] SI_TN_G3 = ["GTTATCACGA", "GCAACACCTC"] SI_TN_G4 = ["CAGGCGAATA", "CCCTTTACCG"] SI_TN_G5 = ["TAAGTAGAAG", "CGCGTTTCCT"] SI_TN_G6 = ["CGAGGAGCAT", "CAGTAAGTCT"] SI_TN_G7 = ["ATCACCGTTT", "TGTCGAGGAG"] SI_TN_G8 = ["GACCGCCTTT", "TTTAACTCGT"] SI_TN_G9 = ["TCCCGACCTG", "AACCCACCAA"] SI_TN_G10 = ["ATTGTACAGT", "TTGGTTACGT"] SI_TN_G11 = ["GACAATTGGG", "ACATTTGGAA"] SI_TN_G12 = ["ATTGGCGCAA", "TCAATTGCAA"] SI_TN_H1 = ["CGTTCCACAT", "GAGGGAGCCA"] SI_TN_H2 = ["ATCTTGCAGC", "CGAGTAAGGA"] SI_TN_H3 = ["CAGCTGTTAT", "AGTACGTGAG"] SI_TN_H4 = ["CTACGACTGA", "CATCGCCCTC"] SI_TN_H5 = ["GCTGGGATGC", "GACTAACTGG"] SI_TN_H6 = ["CCGTCGCTGA", "AGGTGTTAGT"] SI_TN_H7 = ["AAGTTAGTAC", "ACGCGGAATA"] SI_TN_H8 = ["GACTCAGGGT", "GAGACCCTTC"] SI_TN_H9 = ["TGCACAAGCG", "TGATGTTTGC"] SI_TN_H10 = ["TTCGCTTAAC", "CCGCTCGTTA"] SI_TN_H11 = ["AGACGACCGA", "CCACAGAACA"] SI_TN_H12 = ["AGTGGAGGGA", "TGCATAGTTT"] # TS plate SI_TS_A1 = ["AATTTCGGGT", "CTCTCTCCTC"] SI_TS_A2 = ["CTACTGAATT", "CGCTAGCGCT"] SI_TS_A3 = ["CAAGCGTTAG", "CGCGAATGCG"] SI_TS_A4 = ["GCTACCCGGT", "ATGTAATGGA"] SI_TS_A5 = ["CTCAGCGGGA", "TTACGGATAA"] SI_TS_A6 = ["TCAGAACTTT", "CGCAGTCCAC"] SI_TS_A7 = ["TAAACCCTAG", "CTGATAGGAA"] SI_TS_A8 = ["GTCTAGTTTG", "TGGTTGCAAC"] SI_TS_A9 = ["CCACTTACGT", "TTGAAACACG"] SI_TS_A10 = ["TACGGTTCAT", "CGTCCAAGAT"] SI_TS_A11 = ["CTACCTTTCT", "TTCACAGGGA"] SI_TS_A12 = ["GTACCGGTAT", "TTTGGATGGG"] SI_TS_B1 = ["TATGACGAGT", "AGGATTCTCG"] SI_TS_B2 = ["ACCTGGTACA", "TGGGTAAAGT"] SI_TS_B3 = ["GTCACGGGTG", "TGTTATCGTT"] SI_TS_B4 = ["ACCCGCTCGA", "GTCACCCGTA"] SI_TS_B5 = ["GTGTCTAACT", "GCAAGCTCTC"] SI_TS_B6 = ["CGGCCATAGG", "AGCTTCGTTC"] SI_TS_B7 = ["CATGCTGCTC", "GTGGAAACCG"] SI_TS_B8 = ["CGCATTTCTC", "CGCACAACCA"] SI_TS_B9 = ["TCAGTGATGA", "CGACTCTCGC"] SI_TS_B10 = ["CACCGTCGAT", "AGCTATTTCG"] SI_TS_B11 = ["TCTAGACGAA", "TGAATTAGAG"] SI_TS_B12 = ["CCAGGGTCAA", "CGACCTTGTC"] SI_TS_C1 = ["TAGGGTCAAA", "TAGGCAATAA"] SI_TS_C2 = ["TCCTTGGAGC", "CGTCAACCCA"] SI_TS_C3 = ["ACCGACTGAT", "TCCTGGGTTC"] SI_TS_C4 = ["GTTACTAGAT", "GACTGATCAT"] SI_TS_C5 = ["CGAGTTGGGT", "ACTAGAAACA"] SI_TS_C6 = ["CGCGCCAAAG", "AAATCCAAGG"] SI_TS_C7 = ["GATCGCGGTA", "CGGAACCGTC"] SI_TS_C8 = ["GCCACTTCGA", "GAATACGCCA"] SI_TS_C9 = ["TGCTTAACGT", "TACACCCACA"] SI_TS_C10 = ["CCATGGAGGC", "CGCCTAGGTT"] SI_TS_C11 = ["CAGCCAGTAA", "GACATAATAC"] SI_TS_C12 = ["TTTGAGATAC", "GCACTCCGTG"] SI_TS_D1 = ["CTTCTAATGT", "AGTGCGCACT"] SI_TS_D2 = ["AGGCTGATTC", "GCTAGATGAC"] SI_TS_D3 = ["TTCTTTGTAG", "GTCCTCTAAG"] SI_TS_D4 = ["AGACAAGTCA", "CCAGCAGCTT"] SI_TS_D5 = ["ACACAGACAA", "AGACGCGCTA"] SI_TS_D6 = ["ACTAAATGGG", "ACAAATCTGT"] SI_TS_D7 = ["CTAGAAATTG", "CTTACTTTCG"] SI_TS_D8 = ["GCGCAAACAA", "CTAGATAACT"] SI_TS_D9 = ["GAGTAGGATT", "CGTATAGCAT"] SI_TS_D10 = ["TTATGGTGCT", "TTATCCATGC"] SI_TS_D11 = ["GAGTCCGCAA", "CTCTGGAACT"] SI_TS_D12 = ["ACGGAATTAC", "GACAGGACGC"] SI_TS_E1 = ["CACATAAACA", "TACTTCAAAC"] SI_TS_E2 = ["ACCAATCGTG", "TCTCCACGGG"] SI_TS_E3 = ["GTATAGGGTG", "AAACCCTCCA"] SI_TS_E4 = ["CGCTTCCAGA", "TCCGGGTGCT"] SI_TS_E5 = ["CGATGCCCAA", "AGTGGACTTA"] SI_TS_E6 = ["CAGAGAGGGT", "CGATCGTTTA"] SI_TS_E7 = ["TACCAGTGCG", "TACCAGGCTC"] SI_TS_E8 = ["GTTAAACCGC", "AGCCGGCTTG"] SI_TS_E9 = ["CTTAACGCTT", "GCTAGTGTGA"] SI_TS_E10 = ["GAAATGACGG", "TGGAGAAGGG"] SI_TS_E11 = ["TCTTCGAAGT", "ACCTGATATG"] SI_TS_E12 = ["GCGCCACATG", "CATAGTTACA"] SI_TS_F1 = ["GATAATACCG", "ACCACGTAAA"] SI_TS_F2 = ["CTCAACCAGG", "GTCTGCAGAC"] SI_TS_F3 = ["CTGGCCGAAG", "CATTATTCAC"] SI_TS_F4 = ["TTTCGCAGGC", "CTCGATGCAC"] SI_TS_F5 = ["ACTACGGACT", "GAAGCGCTTC"] SI_TS_F6 = ["GCGAGTTTGG", "GCACCCGTAC"] SI_TS_F7 = ["TTGAACCTCT", "GAAGATATAG"] SI_TS_F8 = ["GTCGCGACAA", "CAATCTGCCA"] SI_TS_F9 = ["TATGTTGTGC", "ATGGCTTAAT"] SI_TS_F10 = ["TAAGATGCAC", "TCATAGCCAA"] SI_TS_F11 = ["ATAGTCATAC", "GAAACTGGTC"] SI_TS_F12 = ["GAATGGAAGG", "GTCGCTTGTA"] SI_TS_G1 = ["TTGGCGGCAC", "GTAAGTTACT"] SI_TS_G2 = ["TGATCAAAGG", "AACCTTACTA"] SI_TS_G3 = ["CCAGACACGG", "AGAAAGCGGT"] SI_TS_G4 = ["CATTTACCGT", "CACCTGTAAA"] SI_TS_G5 = ["TGGCCGTGAC", "AACTGTAACG"] SI_TS_G6 = ["CTGAAGTTGC", "GATCTTAAGC"] SI_TS_G7 = ["TGAGTCAAGA", "GCAGATCCTA"] SI_TS_G8 = ["CAGAGGTAAG", "TTTGCACTGA"] SI_TS_G9 = ["TGAGTATCTG", "TGACTCGTTC"] SI_TS_G10 = ["TACATATGCT", "GTAATCGTGA"] SI_TS_G11 = ["AATAGCTATC", "AGTGTCGCTT"] SI_TS_G12 = ["ACCCAGTTGT", "CTTCCCACAA"] SI_TS_H1 = ["CAGGACTCTA", "CGTAGGATGG"] SI_TS_H2 = ["GACCTCTATC", "CGAGGTGTAA"] SI_TS_H3 = ["AAACAGGAGA", "TCGGCCCTTG"] SI_TS_H4 = ["TCTATTGACA", "GTGAACAAAC"] SI_TS_H5 = ["CCCGCTTGAA", "GCCCAAGGTA"] SI_TS_H6 = ["AGTGACCAGT", "TTGTTAGACA"] SI_TS_H7 = ["CGAGCGCAGT", "ACCTCAACTG"] SI_TS_H8 = ["ATACCTAACT", "TATAATGGTG"] SI_TS_H9 = ["CCTCCGTGTC", "GTTCCAGGTA"] SI_TS_H10 = ["TGTGAATTTC", "GAACCACGTG"] SI_TS_H11 = ["ACACCAGCCT", "GCTGGTTCGT"] SI_TS_H12 = ["GACAGGCGGT", "CTGGACTTAG"] # NT plate SI_NT_A1 = ["ATTTACCGCA", "GACAATAAAG"] SI_NT_A2 = ["TTGTCGTAGA", "CAATGTAGCA"] SI_NT_A3 = ["AGTCCTGCGG", "TGACACAAGT"] SI_NT_A4 = ["TTGTTCATGT", "TGACAGCTGA"] SI_NT_A5 = ["TCAGGAAGGA", "GAACGTGCTT"] SI_NT_A6 = ["CTGTTAGAGG", "CCACGCTTCG"] SI_NT_A7 = ["AGATGAGAAT", "GTCGACGGGT"] SI_NT_A8 = ["CCAAAGCCGG", "ACCGTGCACA"] SI_NT_A9 = ["AGTCATAATG", "AGGCTTGAAA"] SI_NT_A10 = ["TTCATCAGAG", "TTGTCGTCTC"] SI_NT_A11 = ["GAAGCGCGAA", "CAGCGAAATT"] SI_NT_A12 = ["ATCCGCCGAA", "GCTACAGAAT"] SI_NT_B1 = ["CTTATTGTGG", "AGCTGTGGGT"] SI_NT_B2 = ["ATTCGTTGGG", "CATCAGGAGC"] SI_NT_B3 = ["GTGGCCTCAT", "TCGAAAGTGA"] SI_NT_B4 = ["CTATGGCATC", "CTCTGAGCGC"] SI_NT_B5 = ["AAACCACAGT", "CCGCAAATGG"] SI_NT_B6 = ["ATGTATCCAC", "CAGGCTGAGG"] SI_NT_B7 = ["GATGAGTCTG", "TATGTAACCG"] SI_NT_B8 = ["CTCACAATAA", "CCGTGTTTAA"] SI_NT_B9 = ["TCTGTCGCAA", "ATCCGAACTG"] SI_NT_B10 = ["CATCGAGAAG", "GTGCATCCGC"] SI_NT_B11 = ["ACGTATTGGG", "CAATCGCAAA"] SI_NT_B12 = ["CTTACGCGAC", "CCTGTCGGAT"] SI_NT_C1 = ["GATAGTGAAG", "CGTTCGCCAG"] SI_NT_C2 = ["CTGTGCAATG", "ATGGTGCTTT"] SI_NT_C3 = ["AAAGCTGAGC", "CAGGAACGAG"] SI_NT_C4 = ["GTCCAAGTCG", "GTCATGGCAC"] SI_NT_C5 = ["GATTTCCATC", "CTTATGGTCA"] SI_NT_C6 = ["CTAAATGGAT", "AATCACATAC"] SI_NT_C7 = ["ATTTCAGTTC", "GCAGCATTAA"] SI_NT_C8 = ["TTGCGACGTC", "TTAATCCACA"] SI_NT_C9 = ["GTACTGTCCA", "TTTGTTGGAA"] SI_NT_C10 = ["AAACGGTTTA", "TCTTCGTTAC"] SI_NT_C11 = ["CGATAGTTCT", "GCGATTTCCT"] SI_NT_C12 = ["TACTTTAGCT", "GAGTTATTTG"] SI_NT_D1 = ["CTGGGATTAA", "AGTAAAGTTC"] SI_NT_D2 = ["TACACTATTC", "ATTGCAACGT"] SI_NT_D3 = ["AGAGCTATTT", "CTGGCACCCA"] SI_NT_D4 = ["AGGTCGTTAT", "AGGTTATCCA"] SI_NT_D5 = ["GCTGGACAGG", "TAATCTCTGT"] SI_NT_D6 = ["ACTTAGATGG", "AATGTTGAGT"] SI_NT_D7 = ["AGGCGCGAGT", "TGTGTCTATA"] SI_NT_D8 = ["GAGGTCGTAC", "CAACTGCGGG"] SI_NT_D9 = ["CCCAATGAGC", "AGTTTCTGAT"] SI_NT_D10 = ["ACATTCAGGG", "GTCCTGAGAG"] SI_NT_D11 = ["AGAAACGGTG", "TCACCCAGCA"] SI_NT_D12 = ["AGTTGCAAGT", "ATACTTCATG"] SI_NT_E1 = ["GCCTAGAAAT", "ACTACTCCGG"] SI_NT_E2 = ["TACAAAGATG", "CCGATGACGT"] SI_NT_E3 = ["GCAGGCTTAG", "CGTCTATTGC"] SI_NT_E4 = ["CAGCTCCAAT", "TAGGAGGGTG"] SI_NT_E5 = ["TTTGGAGAAA", "CAGCCCTTGA"] SI_NT_E6 = ["TGTCGCTTTC", "CCTAAAGGGT"] SI_NT_E7 = ["GTGTTGCGAG", "CACTTTGAGC"] SI_NT_E8 = ["GTCTGTTCTG", "TCTGATGCTT"] SI_NT_E9 = ["TCGCTCAATC", "GCTTACGTGA"] SI_NT_E10 = ["CGTTACTAGC", "AATGGCCATT"] SI_NT_E11 = ["GTGCAGATTT", "TAAAGGCGAT"] SI_NT_E12 = ["GTTACCGAAA", "CGTTTGAATC"] SI_NT_F1 = ["CGGTATGGAA", "TGCAACTGGT"] SI_NT_F2 = ["TCGGTTTAGT", "TAAAGTGTTC"] SI_NT_F3 = ["CTTTGCTTTG", "ACATTCATTC"] SI_NT_F4 = ["ATGATCGCAC", "GCGGTATGTA"] SI_NT_F5 = ["CGGCGTGTTA", "TGAGACGCGG"] SI_NT_F6 = ["TCATTTCCGC", "ACAGCTGTTG"] SI_NT_F7 = ["TTGTGCCCAG", "TTGCGAGTTG"] SI_NT_F8 = ["AGCCAACGTG", "TCAAAGGAAC"] SI_NT_F9 = ["GATCCATACT", "ATCGAGAGAA"] SI_NT_F10 = ["TTTCCATGAA", "CGGTTCTAAC"] SI_NT_F11 = ["TCTTTATCGG", "CCCAATAGCG"] SI_NT_F12 = ["GAACCCGATG", "TCTATCCGGG"] SI_NT_G1 = ["GATGTCTGTG", "CGTGCTACCG"] SI_NT_G2 = ["TGTTAGACTA", "TCATGACGAC"] SI_NT_G3 = ["TAGAACGCTT", "GTCGCAAACG"] SI_NT_G4 = ["AATTTGACGT", "AGAAGTGAGG"] SI_NT_G5 = ["GAGTGGCCAC", "GATGCACAGT"] SI_NT_G6 = ["ATCAGTTACG", "TACAATCTCT"] SI_NT_G7 = ["TGTAAGCTTT", "CGGACTAGTC"] SI_NT_G8 = ["GCTTCGGTCT", "CGCGGGTTAG"] SI_NT_G9 = ["AGTCTAAGAC", "CTGAAGTGAA"] SI_NT_G10 = ["TGAAACATTC", "CCTCCTGCCT"] SI_NT_G11 = ["CCTCACGAAA", "TGCCCTGTGC"] SI_NT_G12 = ["CTACGGGCTT", "AGGCGTCCCT"] SI_NT_H1 = ["GCGGCGTAAA", "CACGCGATCA"] SI_NT_H2 = ["TCTCCTTCGG", "TGTCCGTCGC"] SI_NT_H3 = ["CCTTACCCAT", "TCCCGGCAAC"] SI_NT_H4 = ["AAGGAACATC", "TATCTGTGGG"] SI_NT_H5 = ["GTGGGAACTT", "GCACTTACAG"] SI_NT_H6 = ["ACCGCACCAC", "TCGGATTATA"] SI_NT_H7 = ["ACCTTTATCT", "CGAGTGCCAA"] SI_NT_H8 = ["AGTAGCCCGT", "TTCGGGACCT"] SI_NT_H9 = ["AGATAGCATA", "CATTTCCGGA"] SI_NT_H10 = ["TGGCGTTAAA", "TGTTAAGATG"] SI_NT_H11 = ["TCAGGCGAAA", "TCTCTGGAAG"] SI_NT_H12 = ["AAGACATAGC", "ATGTGGACGT"] SI_P2_A1_10bp = ["GGTTTACTAT", "CTAAACGGAT", "TCGGCGTCAT", "AACCGTAAAT"] SI_P2_A2_10bp = ["TTTCATGAAT", "ACGTCCCTAT", "CGCATGTGAT", "GAAGGAACAT"] SI_P2_A3_10bp = ["CAGTACTGAT", "AGTAGTCTAT", "GCAGTAGAAT", "TTCCCGACAT"] SI_P2_A4_10bp = ["TATGATTCAT", "CCCACAGTAT", "ATGCTGAAAT", "GGATGCCGAT"] SI_P2_A5_10bp = ["CTAGGTGAAT", "TCGTTCAGAT", "AGCCAATTAT", "GATACGCCAT"] SI_P2_A6_10bp = ["CGCTATGTAT", "GCTGTCCAAT", "TTGAGATCAT", "AAACCGAGAT"] SI_P2_A7_10bp = ["ACAGAGGTAT", "TATAGTTGAT", "CGGTCCCAAT", "GTCCTAACAT"] SI_P2_A8_10bp = ["GCATCTCCAT", "TGTAAGGTAT", "CTGCGATGAT", "AACGTCAAAT"] SI_P2_A9_10bp = ["TCTTAAAGAT", "CGAGGCTCAT", "GTCCTTCTAT", "AAGACGGAAT"] SI_P2_A10_10bp = ["GAAACCCTAT", "TTTCTGTCAT", "CCGTGTGAAT", "AGCGAAAGAT"] SI_P2_A11_10bp = ["GTCCGGTCAT", "AAGATCATAT", "CCTGAAGGAT", "TGATCTCAAT"] SI_P2_A12_10bp = ["AGTGGAACAT", "GTCTCCTTAT", "TCACATCAAT", "CAGATGGGAT"] SI_P2_B1_10bp = ["GTAATCTTAT", "TCCGGAAGAT", "AGTTCGGCAT", "CAGCATCAAT"] SI_P2_B2_10bp = ["TACTCTTCAT", "CCTGTGCGAT", "GGACACGTAT", "ATGAGAAAAT"] SI_P2_B3_10bp = ["GTGTATTAAT", "TGTGCGGGAT", "ACCATAACAT", "CAACGCCTAT"] SI_P2_B4_10bp = ["ACTTCATAAT", "GAGATGACAT", "TGCCGTGGAT", "CTAGACCTAT"] SI_P2_B5_10bp = ["AATAATGGAT", "CCAGGGCAAT", "TGCCTCATAT", "GTGTCATCAT"] SI_P2_B6_10bp = ["CGTTAATCAT", "GCCACGCTAT", "TTACTCAGAT", "AAGGGTGAAT"] SI_P2_B7_10bp = ["AAACCTCAAT", "GCCTTGGTAT", "CTGGACTCAT", "TGTAGAAGAT"] SI_P2_B8_10bp = ["AAAGTGCTAT", "GCTACCTGAT", "TGCTGTAAAT", "CTGCAAGCAT"] SI_P2_B9_10bp = ["CTGTAACTAT", "TCTAGCGAAT", "AGAGTGTGAT", "GACCCTACAT"] SI_P2_B10_10bp = ["ACCGTATGAT", "GATTAGATAT", "CTGACTGAAT", "TGACGCCCAT"] SI_P2_B11_10bp = ["GTTCCTCAAT", "AGGTACGCAT", "TAAGTATGAT", "CCCAGGATAT"] SI_P2_B12_10bp = ["TACCACCAAT", "CTAAGTTTAT", "GGGTCAAGAT", "ACTGTGGCAT"] SI_P2_C1_10bp = ["CCACTTATAT", "AACTGGCGAT", "TTGGCATAAT", "GGTAACGCAT"] SI_P2_C2_10bp = ["CCTAGACCAT", "ATCTCTGTAT", "TAGCTCTAAT", "GGAGAGAGAT"] SI_P2_C3_10bp = ["TCAGCCGTAT", "CAGAGGCCAT", "GGTCAATAAT", "ATCTTTAGAT"] SI_P2_C4_10bp = ["ACAATTCAAT", "TGCGCAGCAT", "CATCACTTAT", "GTGTGGAGAT"] SI_P2_C5_10bp = ["CGACTTGAAT", "TACAGACTAT", "ATTGCGTGAT", "GCGTACACAT"] SI_P2_C6_10bp = ["ATTACTTCAT", "TGCGAACTAT", "GCATTCGGAT", "CAGCGGAAAT"] SI_P2_C7_10bp = ["GTCTCTCGAT", "AATCTCTCAT", "CGGAGGGAAT", "TCAGAAATAT"] SI_P2_C8_10bp = ["GTTGAGAAAT", "AGATCTGGAT", "TCGATACTAT", "CACCGCTCAT"] SI_P2_C9_10bp = ["GCGCAGAAAT", "ATCTTACCAT", "TATGGTGTAT", "CGAACCTGAT"] SI_P2_C10_10bp = ["TCTCAGTGAT", "GAGACTATAT", "CGCTTAGCAT", "ATAGGCCAAT"] SI_P2_C11_10bp = ["GAGGATCTAT", "AGACCATAAT", "TCCTGCGCAT", "CTTATGAGAT"] SI_P2_C12_10bp = ["TCTCGTTTAT", "GGCTAGCGAT", "ATGACCGCAT", "CAAGTAAAAT"] SI_P2_D1_10bp = ["CACTCGGAAT", "GCTGAATTAT", "TGAAGTACAT", "ATGCTCCGAT"] SI_P2_D2_10bp = ["TAACAAGGAT", "GGTTCCTCAT", "ATCATGCAAT", "CCGGGTATAT"] SI_P2_D3_10bp = ["ACATTACTAT", "TTTGGGTAAT", "CAGCCCACAT", "GGCAATGGAT"] SI_P2_D4_10bp = ["CCCTAACAAT", "ATTCCGATAT", "TGGATTGCAT", "GAAGGCTGAT"] SI_P2_D5_10bp = ["CTCGTCACAT", "GATCAGCAAT", "ACAACAGGAT", "TGGTGTTTAT"] SI_P2_D6_10bp = ["CATGCGATAT", "TGATATTCAT", "GTGATCGAAT", "ACCCGACGAT"] SI_P2_D7_10bp = ["ATTTGCTAAT", "TAGACACCAT", "CCACAGGGAT", "GGCGTTATAT"] SI_P2_D8_10bp = ["GCAACAAAAT", "TAGTTGTCAT", "CGCCATCGAT", "ATTGGCGTAT"] SI_P2_D9_10bp = ["AGGAGATGAT", "GATGTGGTAT", "CTACATCCAT", "TCCTCCAAAT"] SI_P2_D10_10bp = ["CAATACCCAT", "TGTCTATGAT", "ACCACGAAAT", "GTGGGTGTAT"] SI_P2_D11_10bp = ["CTTTGCGGAT", "TGCACAAAAT", "AAGCAGTCAT", "GCAGTTCTAT"] SI_P2_D12_10bp = ["GCACAATGAT", "CTTGGTACAT", "TGCACCGTAT", "AAGTTGCAAT"] SI_P2_E1_10bp = ["TGGTAAACAT", "GAAAGGGTAT", "ACTGCTCGAT", "CTCCTCTAAT"] SI_P2_E2_10bp = ["GTGGTACCAT", "TACTATAGAT", "ACAAGGTAAT", "CGTCCCGTAT"] SI_P2_E3_10bp = ["AGGTATTGAT", "CTCCTAGTAT", "TCAAGGCCAT", "GATGCCAAAT"] SI_P2_E4_10bp = ["TTCGCCCTAT", "GGATGGGCAT", "AATCAATGAT", "CCGATTAAAT"] SI_P2_E5_10bp = ["CATTAGCGAT", "TTCGCTGAAT", "ACAAGAATAT", "GGGCTCTCAT"] SI_P2_E6_10bp = ["CTGCGGCTAT", "GACTCAAAAT", "AGAAACTCAT", "TCTGTTGGAT"] SI_P2_E7_10bp = ["CACGCCTTAT", "GTATATAGAT", "TCTCGGGCAT", "AGGATACAAT"] SI_P2_E8_10bp = ["ATAGTTACAT", "TGCTGAGTAT", "CCTACGTAAT", "GAGCACCGAT"] SI_P2_E9_10bp = ["TTGTTTCCAT", "GGAGGAGGAT", "CCTAACAAAT", "AACCCGTTAT"] SI_P2_E10_10bp = ["AAATGTGCAT", "GGGCAAATAT", "TCTATCCGAT", "CTCGCGTAAT"] SI_P2_E11_10bp = ["AAGCGCTGAT", "CGTTTGATAT", "GTAGCACAAT", "TCCAATGCAT"] SI_P2_E12_10bp = ["ACCGGCTCAT", "GAGTTAGTAT", "CGTCCTAGAT", "TTAAAGCAAT"] SI_P2_F1_10bp = ["GTTGCAGCAT", "TGGAATTAAT", "CAATGGAGAT", "ACCCTCCTAT"] SI_P2_F2_10bp = ["TTTACATGAT", "CGCGATACAT", "ACGCGGGTAT", "GAATTCCAAT"] SI_P2_F3_10bp = ["TTCAGGTGAT", "ACGGACATAT", "GATCTTGAAT", "CGATCACCAT"] SI_P2_F4_10bp = ["CCCAATAGAT", "GTGTCGCTAT", "AGAGTCGCAT", "TATCGATAAT"] SI_P2_F5_10bp = ["GACTACGTAT", "CTAGCGAGAT", "TCTATATCAT", "AGGCGTCAAT"] SI_P2_F6_10bp = ["CGGAGCACAT", "GACCTATTAT", "ACTTAGGAAT", "TTAGCTCGAT"] SI_P2_F7_10bp = ["CGTGCAGAAT", "AACAAGATAT", "TCGCTTCGAT", "GTATGCTCAT"] SI_P2_F8_10bp = ["CATGAACAAT", "TCACTCGCAT", "AGCTGGATAT", "GTGACTTGAT"] SI_P2_F9_10bp = ["CAAGCTCCAT", "GTTCACTGAT", "TCGTGAAAAT", "AGCATGGTAT"] SI_P2_F10_10bp = ["GCTTGGCTAT", "AAACAAACAT", "CGGGCTTAAT", "TTCATCGGAT"] SI_P2_F11_10bp = ["GCGAGAGTAT", "TACGTTCAAT", "AGTCCCACAT", "CTATAGTGAT"] SI_P2_F12_10bp = ["TGATGCATAT", "GCTACTGAAT", "CACCTGCCAT", "ATGGAATGAT"] SI_P2_G1_10bp = ["ATGAATCTAT", "GATCTCAGAT", "CCAGGAGCAT", "TGCTCGTAAT"] SI_P2_G2_10bp = ["TGATTCTAAT", "ACTAGGAGAT", "CAGCCACTAT", "GTCGATGCAT"] SI_P2_G3_10bp = ["CCTCATTCAT", "AGCATCCGAT", "GTGGCAATAT", "TAATGGGAAT"] SI_P2_G4_10bp = ["GCGATGTGAT", "AGATACAAAT", "TTTCCACTAT", "CACGGTGCAT"] SI_P2_G5_10bp = ["GAGCAAGAAT", "TCTGTGATAT", "CGCAGTTCAT", "ATATCCCGAT"] SI_P2_G6_10bp = ["CTGACGCGAT", "GGTCGTACAT", "TCCTTCTTAT", "AAAGAAGAAT"] SI_P2_G7_10bp = ["GGTATGCAAT", "CTCGAAATAT", "ACACCTTCAT", "TAGTGCGGAT"] SI_P2_G8_10bp = ["TATGAGCTAT", "CCGATAGCAT", "ATACCCAAAT", "GGCTGTTGAT"] SI_P2_G9_10bp = ["TAGGACGTAT", "ATCCCACAAT", "GGAATGTCAT", "CCTTGTAGAT"] SI_P2_G10_10bp = ["TCGCCAGCAT", "AATGTTAGAT", "CGATAGCTAT", "GTCAGCTAAT"] SI_P2_G11_10bp = ["TTATCGTTAT", "AGCAGAGCAT", "CATCTCCAAT", "GCGGATAGAT"] SI_P2_G12_10bp = ["ATTCTAAGAT", "CCCGATTAAT", "TGGAGGCTAT", "GAATCCGCAT"] SI_P2_H1_10bp = ["GTATGTCAAT", "TGTCAGACAT", "CACGTCGGAT", "ACGACATTAT"] SI_P2_H2_10bp = ["TAATGACCAT", "ATGCCTTAAT", "GCCGAGATAT", "CGTATCGGAT"] SI_P2_H3_10bp = ["CCAAGATGAT", "AGGCCCGAAT", "TACGTGACAT", "GTTTATCTAT"] SI_P2_H4_10bp = ["GCCATTCCAT", "CAAGAATTAT", "TTGCCGGAAT", "AGTTGCAGAT"] SI_P2_H5_10bp = ["CCACTACAAT", "GATTCTGGAT", "TGCGGCTTAT", "ATGAAGACAT"] SI_P2_H6_10bp = ["TAGGATAAAT", "CCTTTGTCAT", "GTACGCGGAT", "AGCACACTAT"] SI_P2_H7_10bp = ["AGCTATCAAT", "CATATAACAT", "TCAGGGTGAT", "GTGCCCGTAT"] SI_P2_H8_10bp = ["TTGTTGATAT", "GCTCAACCAT", "CAAAGTGGAT", "AGCGCCTAAT"] SI_P2_H9_10bp = ["ACACTGTTAT", "CAGGATGGAT", "GGCTGAACAT", "TTTACCCAAT"] SI_P2_H10_10bp = ["GTAATTGCAT", "AGTCGCTTAT", "CACGAGAAAT", "TCGTCACGAT"] SI_P2_H11_10bp = ["GGCGAGTAAT", "ACTTCTATAT", "CAAATACGAT", "TTGCGCGCAT"] SI_P2_H12_10bp = ["GACAGCATAT", "TTTGTACAAT", "AGGCCGTGAT", "CCATATGCAT"] # NN Plate SI_NN_A1 = ["GCCTTGTCAA", "GATCCAATCA"] SI_NN_A2 = ["AACTTCTTTG", "ATAAGCGGTA"] SI_NN_A3 = ["TGGTTATAGA", "GAGCTCATAA"] SI_NN_A4 = ["GTAGTGCATC", "ATTTGACGGT"] SI_NN_A5 = ["GCTTGATTTA", "CGGGTGTGAC"] SI_NN_A6 = ["GAAGTTTCGC", "TTTCAAAGCA"] SI_NN_A7 = ["GCAGTTGTTT", "ACACTACTTT"] SI_NN_A8 = ["GCCGCAAGTA", "AAAGGTCCGC"] SI_NN_A9 = ["AAGTTGTATG", "TGTACAATGC"] SI_NN_A10 = ["AGCAACCTTT", "TTCAGCGCTA"] SI_NN_A11 = ["GACGAGGGTT", "TTACTTTGAC"] SI_NN_A12 = ["TGAACAGTCG", "ATTTCTCAGA"] SI_NN_B1 = ["CGAAAGGAGT", "ACACCAAACA"] SI_NN_B2 = ["GAATGACTTG", "TGAGCTCGCT"] SI_NN_B3 = ["GCCAGGGATT", "CAAGTTTAGG"] SI_NN_B4 = ["CTTTGTCCGC", "GCTGTCCCGT"] SI_NN_B5 = ["AGCTTGGGTG", "AGCGTATAGT"] SI_NN_B6 = ["TCGCACCGGT", "TAGCCTCAGG"] SI_NN_B7 = ["TTTAGGTAGG", "ACTGAGGGAC"] SI_NN_B8 = ["GTTCGAGCGG", "CTGTGGGTTT"] SI_NN_B9 = ["AGGGTATGGC", "GAGTCCGACT"] SI_NN_B10 = ["TACCCACTAT", "TGGAACATAT"] SI_NN_B11 = ["TTCAGGCTAC", "CTGGGTATTG"] SI_NN_B12 = ["AGGAATAGAT", "TGCGGTCACG"] SI_NN_C1 = ["ACAGCGCTGT", "GAGGGTCATC"] SI_NN_C2 = ["GACGTACGGA", "ACCTCGCTTT"] SI_NN_C3 = ["CTTAGATGCA", "CTATTCGACT"] SI_NN_C4 = ["ACTCCTCAAC", "ATTCACGGGA"] SI_NN_C5 = ["TCCATACTGT", "GAGCGACTTC"] SI_NN_C6 = ["GCCAGAATGG", "GAATTGTATC"] SI_NN_C7 = ["ATTGCAAGAC", "CGGTGACCAT"] SI_NN_C8 = ["CAACATATCG", "AACTAAAGGC"] SI_NN_C9 = ["CAGGGACCTC", "AATAGCAGCA"] SI_NN_C10 = ["ATTTGGGAAT", "TCAGCCGAGT"] SI_NN_C11 = ["TGGATAATTG", "TTTGTGATCA"] SI_NN_C12 = ["CAGATTATGA", "GTGCCTGTAC"] SI_NN_D1 = ["AATGGTAAGC", "CTGTGAAGTT"] SI_NN_D2 = ["CATCCCTCGG", "AGGGTAGGCG"] SI_NN_D3 = ["CTGGTCCGTC", "ACGAATAAGG"] SI_NN_D4 = ["GTCGTAAATT", "GTAGTAGGCT"] SI_NN_D5 = ["CAACACTGAT", "CAAACCAGGG"] SI_NN_D6 = ["CAGACTGAAT", "TGCCTAACCG"] SI_NN_D7 = ["CGGACACGCT", "TCACGATATA"] SI_NN_D8 = ["CTCGGCTCTC", "TATACTTCCA"] SI_NN_D9 = ["AAGCCTATCA", "GTAGTGAACA"] SI_NN_D10 = ["ACTGTGCCAA", "TAACCGTTAT"] SI_NN_D11 = ["CTACTCCCAT", "TACGTTGCGG"] SI_NN_D12 = ["AGACTCTAAC", "GTGTCGATGT"] SI_NN_E1 = ["TGAGCCGGCA", "TGCTGCATGT"] SI_NN_E2 = ["TAGCTTGCGT", "GCTGCTAAAG"] SI_NN_E3 = ["GTACACCGGG", "AACAGTCGCG"] SI_NN_E4 = ["CGCGTAGACG", "AAAGTAGCTG"] SI_NN_E5 = ["CCGATATATT", "AACTATCCGA"] SI_NN_E6 = ["TTGGGCGGGA", "ATGTATCTGT"] SI_NN_E7 = ["GTTTATGAGG", "GCCAAACAGC"] SI_NN_E8 = ["TTGGATACTC", "CGTACTGAAG"] SI_NN_E9 = ["GCTATCTATC", "AAAGATGGAT"] SI_NN_E10 = ["ATGTGATCGC", "TGACCTACCT"] SI_NN_E11 = ["TCCTCACATG", "AACAGATTCA"] SI_NN_E12 = ["GCCTCCTAAT", "CTCCTCCTGT"] SI_NN_F1 = ["CGAGGCTGAT", "TCGACTTTCT"] SI_NN_F2 = ["CTCATGACAT", "TGTTCCGCAC"] SI_NN_F3 = ["AACGCGGCAA", "GCCCGTTTAC"] SI_NN_F4 = ["AACACCTCTC", "GATTGTATGA"] SI_NN_F5 = ["AAATAACGCG", "ATAGAGGAGC"] SI_NN_F6 = ["GAAATCTTGT", "TAGACGCCAC"] SI_NN_F7 = ["TAGATGGACT", "CCAGGGATAT"] SI_NN_F8 = ["CAATCTGTAT", "TCCCATCGTT"] SI_NN_F9 = ["GCGAAAGTAT", "GTGTCACAGA"] SI_NN_F10 = ["CCCAGAGCTT", "ATGCTGTAAT"] SI_NN_F11 = ["GACTACAGGA", "AGTGACAAAG"] SI_NN_F12 = ["CAATTCATGG", "ACGTAGTTCG"] SI_NN_G1 = ["TGGGAAGGGC", "ACTAACGATG"] SI_NN_G2 = ["TACTTCGCAT", "AACGGTGTCG"] SI_NN_G3 = ["TAAACTGGCA", "CCGACCTCTT"] SI_NN_G4 = ["TTGAAGAACT", "CAACACCAGG"] SI_NN_G5 = ["TCCCTCGTCA", "ATCAGGTGTG"] SI_NN_G6 = ["ACTGGCCTAA", "CGCTCCCTTG"] SI_NN_G7 = ["TCATAATGCA", "GATGAGGCGA"] SI_NN_G8 = ["CGCCACGTTA", "CTTTCATAGG"] SI_NN_G9 = ["TGGACTAAGC", "CTTAACATCG"] SI_NN_G10 = ["AAGCCCGGCA", "GAGTTTCCGT"] SI_NN_G11 = ["ATAGTGGCGG", "TACTGTTGTT"] SI_NN_G12 = ["CCAACCGGAC", "GTTCTATCTA"] SI_NN_H1 = ["TTACAGAGGG", "GTTTATGGCA"] SI_NN_H2 = ["TCCAACAACG", "GTCCGGGTTT"] SI_NN_H3 = ["AAAGCATGTC", "AGATACTACT"] SI_NN_H4 = ["AGAAGTCGTT", "AGGACATTTA"] SI_NN_H5 = ["GCTAGCGTTC", "TCGCGTGGTG"] SI_NN_H6 = ["CAACTAGCTT", "TCAACTAATC"] SI_NN_H7 = ["AGGGCCAGTT", "TAGGGCAAAT"] SI_NN_H8 = ["CTCTATGCGT", "CCTCTGATGC"] SI_NN_H9 = ["GTCCATACAA", "AGCCACTCAC"] SI_NN_H10 = ["AGGGATGCAA", "CTCATATCCT"] SI_NN_H11 = ["TTCAAGTCCT", "CAGCAGCTAA"] SI_NN_H12 = ["CTCCAACCTA", "GCACCGCATC"] # NEB #E7874 plates # Only A1 - H6 are used # Taken from: # https://www.neb.com/en/-/media/nebus/files/manuals/manuale7395_e7874_e7876_e7878.pdf SI_NEB7874_A1 = ["CACTGTAG", "AAGCGACT"] SI_NEB7874_B1 = ["GTGCACGA", "TGATAGGC"] SI_NEB7874_C1 = ["ATGTTCCT", "TCAGCGCC"] SI_NEB7874_D1 = ["CATTATGG", "AGTCACAT"] SI_NEB7874_E1 = ["TCTTGTTT", "CCTTTCAC"] SI_NEB7874_F1 = ["GGCTTACT", "CTTTCCCT"] SI_NEB7874_G1 = ["ACGATATG", "GACAATTC"] SI_NEB7874_H1 = ["ATCCGCAG", "ACACGACT"] SI_NEB7874_A2 = ["AAGCGACT", "ACGAATCC"] SI_NEB7874_B2 = ["TGATAGGC", "GTCTGAGT"] SI_NEB7874_C2 = ["AACACCAC", "GGTGTGAG"] SI_NEB7874_D2 = ["ACCTCTTC", "CTTGCATA"] SI_NEB7874_E2 = ["GTCCGATC", "GCCAATCC"] SI_NEB7874_F2 = ["GAGGACCA", "ATGCCGGT"] SI_NEB7874_G2 = ["CGCTCTTA", "CATACCGT"] SI_NEB7874_H2 = ["CTGAGCTC", "ATCAGAGC"] SI_NEB7874_A3 = ["ACGAATCC", "ATTACCCA"] SI_NEB7874_B3 = ["GTCTGAGT", "GACTTGTG"] SI_NEB7874_C3 = ["CCTAAACT", "ACGAGGAG"] SI_NEB7874_D3 = ["TGTCACAC", "TAATCTCG"] SI_NEB7874_E3 = ["GATATGAA", "TACGGCAG"] SI_NEB7874_F3 = ["AAGTGTGG", "TGCCCATC"] SI_NEB7874_G3 = ["GTTGGCGT", "CAGCAGTC"] SI_NEB7874_H3 = ["TAGCTGGC", "TACCGGCT"] SI_NEB7874_A4 = ["ATTACCCA", "CACTGTAG"] SI_NEB7874_B4 = ["GACTTGTG", "GTGCACGA"] SI_NEB7874_C4 = ["CAGGTAAG", "CTCGAAAT"] SI_NEB7874_D4 = ["AAGGAGAC", "CTCACAAC"] SI_NEB7874_E4 = ["AGTCAGGT", "GTAACCAC"] SI_NEB7874_F4 = ["ACCGTAAG", "CATATCCA"] SI_NEB7874_G4 = ["TATGACGT", "CGCTAATC"] SI_NEB7874_H4 = ["TTGGGTAC", "CTTCCAAC"] SI_NEB7874_A5 = ["TTCAATAG", "TCCCACGA"] SI_NEB7874_B5 = ["GTTTGCTC", "ACCAACAG"] SI_NEB7874_C5 = ["AGAAGCCT", "GTCAGTAT"] SI_NEB7874_D5 = ["CTAGGTTG", "ATTCGAGC"] SI_NEB7874_E5 = ["TGTGTCAG", "CACCTGTA"] SI_NEB7874_F5 = ["AGAACCAG", "CCGACTCT"] SI_NEB7874_G5 = ["ATTGGACA", "TTGCTGGA"] SI_NEB7874_H5 = ["ACCCGTTG", "CAGCTTCG"] SI_NEB7874_A6 = ["ACCGGAGT", "AAGGAAGG"] SI_NEB7874_B6 = ["CTTGACGA", "GCACACAA"] SI_NEB7874_C6 = ["GCCACGAC", "CCTCGGGT"] SI_NEB7874_D6 = ["TCTGGAAC", "TAGCACCT"] SI_NEB7874_E6 = ["CACTAGAC", "TGAGGACT"] SI_NEB7874_F6 = ["TTGCGTTA", "TTCCCGAA"] SI_NEB7874_G6 = ["CCTATGCA", "GAGTCGAT"] SI_NEB7874_H6 = ["CAACCGAG", "TACCTGTG"] SAMPLE_INDEX_MAP = { # GemCode Tube labels "SI-001": SI_001, "SI-002": SI_002, "SI-003": SI_003, "SI-004": SI_004, "SI-005": SI_005, "SI-006": SI_006, "SI-007": SI_007, "SI-008": SI_008, # GemCode Plate labels "SI-P01-A1": SI_P01_A1, "SI-P01-B1": SI_P01_B1, "SI-P01-C1": SI_P01_C1, "SI-P01-D1": SI_P01_D1, "SI-P01-E1": SI_P01_E1, "SI-P01-F1": SI_P01_F1, "SI-P01-G1": SI_P01_G1, "SI-P01-H1": SI_P01_H1, "SI-P01-A2": SI_P01_A2, "SI-P01-B2": SI_P01_B2, "SI-P01-C2": SI_P01_C2, "SI-P01-D2": SI_P01_D2, "SI-P01-E2": SI_P01_E2, "SI-P01-F2": SI_P01_F2, "SI-P01-G2": SI_P01_G2, "SI-P01-H2": SI_P01_H2, "SI-P01-A3": SI_P01_A3, "SI-P01-B3": SI_P01_B3, "SI-P01-C3": SI_P01_C3, "SI-P01-D3": SI_P01_D3, "SI-P01-E3": SI_P01_E3, "SI-P01-F3": SI_P01_F3, "SI-P01-G3": SI_P01_G3, "SI-P01-H3": SI_P01_H3, "SI-P01-A4": SI_P01_A4, "SI-P01-B4": SI_P01_B4, "SI-P01-C4": SI_P01_C4, "SI-P01-D4": SI_P01_D4, "SI-P01-E4": SI_P01_E4, "SI-P01-F4": SI_P01_F4, "SI-P01-G4": SI_P01_G4, "SI-P01-H4": SI_P01_H4, "SI-P01-A5": SI_P01_A5, "SI-P01-B5": SI_P01_B5, "SI-P01-C5": SI_P01_C5, "SI-P01-D5": SI_P01_D5, "SI-P01-E5": SI_P01_E5, "SI-P01-F5": SI_P01_F5, "SI-P01-G5": SI_P01_G5, "SI-P01-H5": SI_P01_H5, "SI-P01-A6": SI_P01_A6, "SI-P01-B6": SI_P01_B6, "SI-P01-C6": SI_P01_C6, "SI-P01-D6": SI_P01_D6, "SI-P01-E6": SI_P01_E6, "SI-P01-F6": SI_P01_F6, "SI-P01-G6": SI_P01_G6, "SI-P01-H6": SI_P01_H6, "SI-P01-A7": SI_P01_A7, "SI-P01-B7": SI_P01_B7, "SI-P01-C7": SI_P01_C7, "SI-P01-D7": SI_P01_D7, "SI-P01-E7": SI_P01_E7, "SI-P01-F7": SI_P01_F7, "SI-P01-G7": SI_P01_G7, "SI-P01-H7": SI_P01_H7, "SI-P01-A8": SI_P01_A8, "SI-P01-B8": SI_P01_B8, "SI-P01-C8": SI_P01_C8, "SI-P01-D8": SI_P01_D8, "SI-P01-E8": SI_P01_E8, "SI-P01-F8": SI_P01_F8, "SI-P01-G8": SI_P01_G8, "SI-P01-H8": SI_P01_H8, "SI-P01-A9": SI_P01_A9, "SI-P01-B9": SI_P01_B9, "SI-P01-C9": SI_P01_C9, "SI-P01-D9": SI_P01_D9, "SI-P01-E9": SI_P01_E9, "SI-P01-F9": SI_P01_F9, "SI-P01-G9": SI_P01_G9, "SI-P01-H9": SI_P01_H9, "SI-P01-A10": SI_P01_A10, "SI-P01-B10": SI_P01_B10, "SI-P01-C10": SI_P01_C10, "SI-P01-D10": SI_P01_D10, "SI-P01-E10": SI_P01_E10, "SI-P01-F10": SI_P01_F10, "SI-P01-G10": SI_P01_G10, "SI-P01-H10": SI_P01_H10, "SI-P01-A11": SI_P01_A11, "SI-P01-B11": SI_P01_B11, "SI-P01-C11": SI_P01_C11, "SI-P01-D11": SI_P01_D11, "SI-P01-E11": SI_P01_E11, "SI-P01-F11": SI_P01_F11, "SI-P01-G11": SI_P01_G11, "SI-P01-H11": SI_P01_H11, "SI-P01-A12": SI_P01_A12, "SI-P01-B12": SI_P01_B12, "SI-P01-C12": SI_P01_C12, "SI-P01-D12": SI_P01_D12, "SI-P01-E12": SI_P01_E12, "SI-P01-F12": SI_P01_F12, "SI-P01-G12": SI_P01_G12, "SI-P01-H12": SI_P01_H12, "SI-P03-A1": SI_P03_A1, "SI-P03-B1": SI_P03_B1, "SI-P03-C1": SI_P03_C1, "SI-P03-D1": SI_P03_D1, "SI-P03-E1": SI_P03_E1, "SI-P03-F1": SI_P03_F1, "SI-P03-G1": SI_P03_G1, "SI-P03-H1": SI_P03_H1, "SI-P03-A2": SI_P03_A2, "SI-P03-B2": SI_P03_B2, "SI-P03-C2": SI_P03_C2, "SI-P03-D2": SI_P03_D2, "SI-P03-E2": SI_P03_E2, "SI-P03-F2": SI_P03_F2, "SI-P03-G2": SI_P03_G2, "SI-P03-H2": SI_P03_H2, "SI-P03-A3": SI_P03_A3, "SI-P03-B3": SI_P03_B3, "SI-P03-C3": SI_P03_C3, "SI-P03-D3": SI_P03_D3, "SI-P03-E3": SI_P03_E3, "SI-P03-F3": SI_P03_F3, "SI-P03-G3": SI_P03_G3, "SI-P03-H3": SI_P03_H3, "SI-P03-A4": SI_P03_A4, "SI-P03-B4": SI_P03_B4, "SI-P03-C4": SI_P03_C4, "SI-P03-D4": SI_P03_D4, "SI-P03-E4": SI_P03_E4, "SI-P03-F4": SI_P03_F4, "SI-P03-G4": SI_P03_G4, "SI-P03-H4": SI_P03_H4, "SI-P03-A5": SI_P03_A5, "SI-P03-B5": SI_P03_B5, "SI-P03-C5": SI_P03_C5, "SI-P03-D5": SI_P03_D5, "SI-P03-E5": SI_P03_E5, "SI-P03-F5": SI_P03_F5, "SI-P03-G5": SI_P03_G5, "SI-P03-H5": SI_P03_H5, "SI-P03-A6": SI_P03_A6, "SI-P03-B6": SI_P03_B6, "SI-P03-C6": SI_P03_C6, "SI-P03-D6": SI_P03_D6, "SI-P03-E6": SI_P03_E6, "SI-P03-F6": SI_P03_F6, "SI-P03-G6": SI_P03_G6, "SI-P03-H6": SI_P03_H6, "SI-P03-A7": SI_P03_A7, "SI-P03-B7": SI_P03_B7, "SI-P03-C7": SI_P03_C7, "SI-P03-D7": SI_P03_D7, "SI-P03-E7": SI_P03_E7, "SI-P03-F7": SI_P03_F7, "SI-P03-G7": SI_P03_G7, "SI-P03-H7": SI_P03_H7, "SI-P03-A8": SI_P03_A8, "SI-P03-B8": SI_P03_B8, "SI-P03-C8": SI_P03_C8, "SI-P03-D8": SI_P03_D8, "SI-P03-E8": SI_P03_E8, "SI-P03-F8": SI_P03_F8, "SI-P03-G8": SI_P03_G8, "SI-P03-H8": SI_P03_H8, "SI-P03-A9": SI_P03_A9, "SI-P03-B9": SI_P03_B9, "SI-P03-C9": SI_P03_C9, "SI-P03-D9": SI_P03_D9, "SI-P03-E9": SI_P03_E9, "SI-P03-F9": SI_P03_F9, "SI-P03-G9": SI_P03_G9, "SI-P03-H9": SI_P03_H9, "SI-P03-A10": SI_P03_A10, "SI-P03-B10": SI_P03_B10, "SI-P03-C10": SI_P03_C10, "SI-P03-D10": SI_P03_D10, "SI-P03-E10": SI_P03_E10, "SI-P03-F10": SI_P03_F10, "SI-P03-G10": SI_P03_G10, "SI-P03-H10": SI_P03_H10, "SI-P03-A11": SI_P03_A11, "SI-P03-B11": SI_P03_B11, "SI-P03-C11": SI_P03_C11, "SI-P03-D11": SI_P03_D11, "SI-P03-E11": SI_P03_E11, "SI-P03-F11": SI_P03_F11, "SI-P03-G11": SI_P03_G11, "SI-P03-H11": SI_P03_H11, "SI-P03-A12": SI_P03_A12, "SI-P03-B12": SI_P03_B12, "SI-P03-C12": SI_P03_C12, "SI-P03-D12": SI_P03_D12, "SI-P03-E12": SI_P03_E12, "SI-P03-F12": SI_P03_F12, "SI-P03-G12": SI_P03_G12, "SI-P03-H12": SI_P03_H12, "SI-3A-A1": SI_3A_A1, "SI-3A-B1": SI_3A_B1, "SI-3A-C1": SI_3A_C1, "SI-3A-D1": SI_3A_D1, "SI-3A-E1": SI_3A_E1, "SI-3A-F1": SI_3A_F1, "SI-3A-G1": SI_3A_G1, "SI-3A-H1": SI_3A_H1, "SI-3A-A2": SI_3A_A2, "SI-3A-B2": SI_3A_B2, "SI-3A-C2": SI_3A_C2, "SI-3A-D2": SI_3A_D2, "SI-3A-E2": SI_3A_E2, "SI-3A-F2": SI_3A_F2, "SI-3A-G2": SI_3A_G2, "SI-3A-H2": SI_3A_H2, "SI-3A-A3": SI_3A_A3, "SI-3A-B3": SI_3A_B3, "SI-3A-C3": SI_3A_C3, "SI-3A-D3": SI_3A_D3, "SI-3A-E3": SI_3A_E3, "SI-3A-F3": SI_3A_F3, "SI-3A-G3": SI_3A_G3, "SI-3A-H3": SI_3A_H3, "SI-3A-A4": SI_3A_A4, "SI-3A-B4": SI_3A_B4, "SI-3A-C4": SI_3A_C4, "SI-3A-D4": SI_3A_D4, "SI-3A-E4": SI_3A_E4, "SI-3A-F4": SI_3A_F4, "SI-3A-G4": SI_3A_G4, "SI-3A-H4": SI_3A_H4, "SI-3A-A5": SI_3A_A5, "SI-3A-B5": SI_3A_B5, "SI-3A-C5": SI_3A_C5, "SI-3A-D5": SI_3A_D5, "SI-3A-E5": SI_3A_E5, "SI-3A-F5": SI_3A_F5, "SI-3A-G5": SI_3A_G5, "SI-3A-H5": SI_3A_H5, "SI-3A-A6": SI_3A_A6, "SI-3A-B6": SI_3A_B6, "SI-3A-C6": SI_3A_C6, "SI-3A-D6": SI_3A_D6, "SI-3A-E6": SI_3A_E6, "SI-3A-F6": SI_3A_F6, "SI-3A-G6": SI_3A_G6, "SI-3A-H6": SI_3A_H6, "SI-3A-A7": SI_3A_A7, "SI-3A-B7": SI_3A_B7, "SI-3A-C7": SI_3A_C7, "SI-3A-D7": SI_3A_D7, "SI-3A-E7": SI_3A_E7, "SI-3A-F7": SI_3A_F7, "SI-3A-G7": SI_3A_G7, "SI-3A-H7": SI_3A_H7, "SI-3A-A8": SI_3A_A8, "SI-3A-B8": SI_3A_B8, "SI-3A-C8": SI_3A_C8, "SI-3A-D8": SI_3A_D8, "SI-3A-E8": SI_3A_E8, "SI-3A-F8": SI_3A_F8, "SI-3A-G8": SI_3A_G8, "SI-3A-H8": SI_3A_H8, "SI-3A-A9": SI_3A_A9, "SI-3A-B9": SI_3A_B9, "SI-3A-C9": SI_3A_C9, "SI-3A-D9": SI_3A_D9, "SI-3A-E9": SI_3A_E9, "SI-3A-F9": SI_3A_F9, "SI-3A-G9": SI_3A_G9, "SI-3A-H9": SI_3A_H9, "SI-3A-A10": SI_3A_A10, "SI-3A-B10": SI_3A_B10, "SI-3A-C10": SI_3A_C10, "SI-3A-D10": SI_3A_D10, "SI-3A-E10": SI_3A_E10, "SI-3A-F10": SI_3A_F10, "SI-3A-G10": SI_3A_G10, "SI-3A-H10": SI_3A_H10, "SI-3A-A11": SI_3A_A11, "SI-3A-B11": SI_3A_B11, "SI-3A-C11": SI_3A_C11, "SI-3A-D11": SI_3A_D11, "SI-3A-E11": SI_3A_E11, "SI-3A-F11": SI_3A_F11, "SI-3A-G11": SI_3A_G11, "SI-3A-H11": SI_3A_H11, "SI-3A-A12": SI_3A_A12, "SI-3A-B12": SI_3A_B12, "SI-3A-C12": SI_3A_C12, "SI-3A-D12": SI_3A_D12, "SI-3A-E12": SI_3A_E12, "SI-3A-F12": SI_3A_F12, "SI-3A-G12": SI_3A_G12, "SI-3A-H12": SI_3A_H12, "SI-GA-A1": SI_GA_A1, "SI-GA-B1": SI_GA_B1, "SI-GA-C1": SI_GA_C1, "SI-GA-D1": SI_GA_D1, "SI-GA-E1": SI_GA_E1, "SI-GA-F1": SI_GA_F1, "SI-GA-G1": SI_GA_G1, "SI-GA-H1": SI_GA_H1, "SI-GA-A2": SI_GA_A2, "SI-GA-B2": SI_GA_B2, "SI-GA-C2": SI_GA_C2, "SI-GA-D2": SI_GA_D2, "SI-GA-E2": SI_GA_E2, "SI-GA-F2": SI_GA_F2, "SI-GA-G2": SI_GA_G2, "SI-GA-H2": SI_GA_H2, "SI-GA-A3": SI_GA_A3, "SI-GA-B3": SI_GA_B3, "SI-GA-C3": SI_GA_C3, "SI-GA-D3": SI_GA_D3, "SI-GA-E3": SI_GA_E3, "SI-GA-F3": SI_GA_F3, "SI-GA-G3": SI_GA_G3, "SI-GA-H3": SI_GA_H3, "SI-GA-A4": SI_GA_A4, "SI-GA-B4": SI_GA_B4, "SI-GA-C4": SI_GA_C4, "SI-GA-D4": SI_GA_D4, "SI-GA-E4": SI_GA_E4, "SI-GA-F4": SI_GA_F4, "SI-GA-G4": SI_GA_G4, "SI-GA-H4": SI_GA_H4, "SI-GA-A5": SI_GA_A5, "SI-GA-B5": SI_GA_B5, "SI-GA-C5": SI_GA_C5, "SI-GA-D5": SI_GA_D5, "SI-GA-E5": SI_GA_E5, "SI-GA-F5": SI_GA_F5, "SI-GA-G5": SI_GA_G5, "SI-GA-H5": SI_GA_H5, "SI-GA-A6": SI_GA_A6, "SI-GA-B6": SI_GA_B6, "SI-GA-C6": SI_GA_C6, "SI-GA-D6": SI_GA_D6, "SI-GA-E6": SI_GA_E6, "SI-GA-F6": SI_GA_F6, "SI-GA-G6": SI_GA_G6, "SI-GA-H6": SI_GA_H6, "SI-GA-A7": SI_GA_A7, "SI-GA-B7": SI_GA_B7, "SI-GA-C7": SI_GA_C7, "SI-GA-D7": SI_GA_D7, "SI-GA-E7": SI_GA_E7, "SI-GA-F7": SI_GA_F7, "SI-GA-G7": SI_GA_G7, "SI-GA-H7": SI_GA_H7, "SI-GA-A8": SI_GA_A8, "SI-GA-B8": SI_GA_B8, "SI-GA-C8": SI_GA_C8, "SI-GA-D8": SI_GA_D8, "SI-GA-E8": SI_GA_E8, "SI-GA-F8": SI_GA_F8, "SI-GA-G8": SI_GA_G8, "SI-GA-H8": SI_GA_H8, "SI-GA-A9": SI_GA_A9, "SI-GA-B9": SI_GA_B9, "SI-GA-C9": SI_GA_C9, "SI-GA-D9": SI_GA_D9, "SI-GA-E9": SI_GA_E9, "SI-GA-F9": SI_GA_F9, "SI-GA-G9": SI_GA_G9, "SI-GA-H9": SI_GA_H9, "SI-GA-A10": SI_GA_A10, "SI-GA-B10": SI_GA_B10, "SI-GA-C10": SI_GA_C10, "SI-GA-D10": SI_GA_D10, "SI-GA-E10": SI_GA_E10, "SI-GA-F10": SI_GA_F10, "SI-GA-G10": SI_GA_G10, "SI-GA-H10": SI_GA_H10, "SI-GA-A11": SI_GA_A11, "SI-GA-B11": SI_GA_B11, "SI-GA-C11": SI_GA_C11, "SI-GA-D11": SI_GA_D11, "SI-GA-E11": SI_GA_E11, "SI-GA-F11": SI_GA_F11, "SI-GA-G11": SI_GA_G11, "SI-GA-H11": SI_GA_H11, "SI-GA-A12": SI_GA_A12, "SI-GA-B12": SI_GA_B12, "SI-GA-C12": SI_GA_C12, "SI-GA-D12": SI_GA_D12, "SI-GA-E12": SI_GA_E12, "SI-GA-F12": SI_GA_F12, "SI-GA-G12": SI_GA_G12, "SI-GA-H12": SI_GA_H12, # ATAC/VDJ-FB "SI-NA-A1": SI_NA_A1, "SI-NA-B1": SI_NA_B1, "SI-NA-C1": SI_NA_C1, "SI-NA-D1": SI_NA_D1, "SI-NA-E1": SI_NA_E1, "SI-NA-F1": SI_NA_F1, "SI-NA-G1": SI_NA_G1, "SI-NA-H1": SI_NA_H1, "SI-NA-A2": SI_NA_A2, "SI-NA-B2": SI_NA_B2, "SI-NA-C2": SI_NA_C2, "SI-NA-D2": SI_NA_D2, "SI-NA-E2": SI_NA_E2, "SI-NA-F2": SI_NA_F2, "SI-NA-G2": SI_NA_G2, "SI-NA-H2": SI_NA_H2, "SI-NA-A3": SI_NA_A3, "SI-NA-B3": SI_NA_B3, "SI-NA-C3": SI_NA_C3, "SI-NA-D3": SI_NA_D3, "SI-NA-E3": SI_NA_E3, "SI-NA-F3": SI_NA_F3, "SI-NA-G3": SI_NA_G3, "SI-NA-H3": SI_NA_H3, "SI-NA-A4": SI_NA_A4, "SI-NA-B4": SI_NA_B4, "SI-NA-C4": SI_NA_C4, "SI-NA-D4": SI_NA_D4, "SI-NA-E4": SI_NA_E4, "SI-NA-F4": SI_NA_F4, "SI-NA-G4": SI_NA_G4, "SI-NA-H4": SI_NA_H4, "SI-NA-A5": SI_NA_A5, "SI-NA-B5": SI_NA_B5, "SI-NA-C5": SI_NA_C5, "SI-NA-D5": SI_NA_D5, "SI-NA-E5": SI_NA_E5, "SI-NA-F5": SI_NA_F5, "SI-NA-G5": SI_NA_G5, "SI-NA-H5": SI_NA_H5, "SI-NA-A6": SI_NA_A6, "SI-NA-B6": SI_NA_B6, "SI-NA-C6": SI_NA_C6, "SI-NA-D6": SI_NA_D6, "SI-NA-E6": SI_NA_E6, "SI-NA-F6": SI_NA_F6, "SI-NA-G6": SI_NA_G6, "SI-NA-H6": SI_NA_H6, "SI-NA-A7": SI_NA_A7, "SI-NA-B7": SI_NA_B7, "SI-NA-C7": SI_NA_C7, "SI-NA-D7": SI_NA_D7, "SI-NA-E7": SI_NA_E7, "SI-NA-F7": SI_NA_F7, "SI-NA-G7": SI_NA_G7, "SI-NA-H7": SI_NA_H7, "SI-NA-A8": SI_NA_A8, "SI-NA-B8": SI_NA_B8, "SI-NA-C8": SI_NA_C8, "SI-NA-D8": SI_NA_D8, "SI-NA-E8": SI_NA_E8, "SI-NA-F8": SI_NA_F8, "SI-NA-G8": SI_NA_G8, "SI-NA-H8": SI_NA_H8, "SI-NA-A9": SI_NA_A9, "SI-NA-B9": SI_NA_B9, "SI-NA-C9": SI_NA_C9, "SI-NA-D9": SI_NA_D9, "SI-NA-E9": SI_NA_E9, "SI-NA-F9": SI_NA_F9, "SI-NA-G9": SI_NA_G9, "SI-NA-H9": SI_NA_H9, "SI-NA-A10": SI_NA_A10, "SI-NA-B10": SI_NA_B10, "SI-NA-C10": SI_NA_C10, "SI-NA-D10": SI_NA_D10, "SI-NA-E10": SI_NA_E10, "SI-NA-F10": SI_NA_F10, "SI-NA-G10": SI_NA_G10, "SI-NA-H10": SI_NA_H10, "SI-NA-A11": SI_NA_A11, "SI-NA-B11": SI_NA_B11, "SI-NA-C11": SI_NA_C11, "SI-NA-D11": SI_NA_D11, "SI-NA-E11": SI_NA_E11, "SI-NA-F11": SI_NA_F11, "SI-NA-G11": SI_NA_G11, "SI-NA-H11": SI_NA_H11, "SI-NA-A12": SI_NA_A12, "SI-NA-B12": SI_NA_B12, "SI-NA-C12": SI_NA_C12, "SI-NA-D12": SI_NA_D12, "SI-NA-E12": SI_NA_E12, "SI-NA-F12": SI_NA_F12, "SI-NA-G12": SI_NA_G12, "SI-NA-H12": SI_NA_H12, # GemCode Part numbers "220027": SI_001, "220028": SI_002, "220029": SI_003, "220030": SI_004, "220031": SI_005, "220032": SI_006, "220033": SI_007, "220034": SI_008, # WGS+ Tube labels "SI-T2-1": SI_T2_1, "SI-T2-2": SI_T2_2, "SI-T2-3": SI_T2_3, "SI-T2-4": SI_T2_4, "SI-T2-5": SI_T2_5, "SI-T2-6": SI_T2_6, "SI-T2-7": SI_T2_7, "SI-T2-8": SI_T2_8, # WGS+ Plate labels "SI-P2-A1": SI_P2_A1, "SI-P2-A2": SI_P2_A2, "SI-P2-A3": SI_P2_A3, "SI-P2-A4": SI_P2_A4, "SI-P2-A5": SI_P2_A5, "SI-P2-A6": SI_P2_A6, "SI-P2-A7": SI_P2_A7, "SI-P2-A8": SI_P2_A8, "SI-P2-A9": SI_P2_A9, "SI-P2-A10": SI_P2_A10, "SI-P2-A11": SI_P2_A11, "SI-P2-A12": SI_P2_A12, "SI-P2-B1": SI_P2_B1, "SI-P2-B2": SI_P2_B2, "SI-P2-B3": SI_P2_B3, "SI-P2-B4": SI_P2_B4, "SI-P2-B5": SI_P2_B5, "SI-P2-B6": SI_P2_B6, "SI-P2-B7": SI_P2_B7, "SI-P2-B8": SI_P2_B8, "SI-P2-B9": SI_P2_B9, "SI-P2-B10": SI_P2_B10, "SI-P2-B11": SI_P2_B11, "SI-P2-B12": SI_P2_B12, "SI-P2-C1": SI_P2_C1, "SI-P2-C2": SI_P2_C2, "SI-P2-C3": SI_P2_C3, "SI-P2-C4": SI_P2_C4, "SI-P2-C5": SI_P2_C5, "SI-P2-C6": SI_P2_C6, "SI-P2-C7": SI_P2_C7, "SI-P2-C8": SI_P2_C8, "SI-P2-C9": SI_P2_C9, "SI-P2-C10": SI_P2_C10, "SI-P2-C11": SI_P2_C11, "SI-P2-C12": SI_P2_C12, "SI-P2-D1": SI_P2_D1, "SI-P2-D2": SI_P2_D2, "SI-P2-D3": SI_P2_D3, "SI-P2-D4": SI_P2_D4, "SI-P2-D5": SI_P2_D5, "SI-P2-D6": SI_P2_D6, "SI-P2-D7": SI_P2_D7, "SI-P2-D8": SI_P2_D8, "SI-P2-D9": SI_P2_D9, "SI-P2-D10": SI_P2_D10, "SI-P2-D11": SI_P2_D11, "SI-P2-D12": SI_P2_D12, "SI-P2-E1": SI_P2_E1, "SI-P2-E2": SI_P2_E2, "SI-P2-E3": SI_P2_E3, "SI-P2-E4": SI_P2_E4, "SI-P2-E5": SI_P2_E5, "SI-P2-E6": SI_P2_E6, "SI-P2-E7": SI_P2_E7, "SI-P2-E8": SI_P2_E8, "SI-P2-E9": SI_P2_E9, "SI-P2-E10": SI_P2_E10, "SI-P2-E11": SI_P2_E11, "SI-P2-E12": SI_P2_E12, "SI-P2-F1": SI_P2_F1, "SI-P2-F2": SI_P2_F2, "SI-P2-F3": SI_P2_F3, "SI-P2-F4": SI_P2_F4, "SI-P2-F5": SI_P2_F5, "SI-P2-F6": SI_P2_F6, "SI-P2-F7": SI_P2_F7, "SI-P2-F8": SI_P2_F8, "SI-P2-F9": SI_P2_F9, "SI-P2-F10": SI_P2_F10, "SI-P2-F11": SI_P2_F11, "SI-P2-F12": SI_P2_F12, "SI-P2-G1": SI_P2_G1, "SI-P2-G2": SI_P2_G2, "SI-P2-G3": SI_P2_G3, "SI-P2-G4": SI_P2_G4, "SI-P2-G5": SI_P2_G5, "SI-P2-G6": SI_P2_G6, "SI-P2-G7": SI_P2_G7, "SI-P2-G8": SI_P2_G8, "SI-P2-G9": SI_P2_G9, "SI-P2-G10": SI_P2_G10, "SI-P2-G11": SI_P2_G11, "SI-P2-G12": SI_P2_G12, "SI-P2-H1": SI_P2_H1, "SI-P2-H2": SI_P2_H2, "SI-P2-H3": SI_P2_H3, "SI-P2-H4": SI_P2_H4, "SI-P2-H5": SI_P2_H5, "SI-P2-H6": SI_P2_H6, "SI-P2-H7": SI_P2_H7, "SI-P2-H8": SI_P2_H8, "SI-P2-H9": SI_P2_H9, "SI-P2-H10": SI_P2_H10, "SI-P2-H11": SI_P2_H11, "SI-P2-H12": SI_P2_H12, # WGS+ Plate Label 10bp "SI-P2-A1-10bp": SI_P2_A1_10bp, "SI-P2-A2-10bp": SI_P2_A2_10bp, "SI-P2-A3-10bp": SI_P2_A3_10bp, "SI-P2-A4-10bp": SI_P2_A4_10bp, "SI-P2-A5-10bp": SI_P2_A5_10bp, "SI-P2-A6-10bp": SI_P2_A6_10bp, "SI-P2-A7-10bp": SI_P2_A7_10bp, "SI-P2-A8-10bp": SI_P2_A8_10bp, "SI-P2-A9-10bp": SI_P2_A9_10bp, "SI-P2-A10-10bp": SI_P2_A10_10bp, "SI-P2-A11-10bp": SI_P2_A11_10bp, "SI-P2-A12-10bp": SI_P2_A12_10bp, "SI-P2-B1-10bp": SI_P2_B1_10bp, "SI-P2-B2-10bp": SI_P2_B2_10bp, "SI-P2-B3-10bp": SI_P2_B3_10bp, "SI-P2-B4-10bp": SI_P2_B4_10bp, "SI-P2-B5-10bp": SI_P2_B5_10bp, "SI-P2-B6-10bp": SI_P2_B6_10bp, "SI-P2-B7-10bp": SI_P2_B7_10bp, "SI-P2-B8-10bp": SI_P2_B8_10bp, "SI-P2-B9-10bp": SI_P2_B9_10bp, "SI-P2-B10-10bp": SI_P2_B10_10bp, "SI-P2-B11-10bp": SI_P2_B11_10bp, "SI-P2-B12-10bp": SI_P2_B12_10bp, "SI-P2-C1-10bp": SI_P2_C1_10bp, "SI-P2-C2-10bp": SI_P2_C2_10bp, "SI-P2-C3-10bp": SI_P2_C3_10bp, "SI-P2-C4-10bp": SI_P2_C4_10bp, "SI-P2-C5-10bp": SI_P2_C5_10bp, "SI-P2-C6-10bp": SI_P2_C6_10bp, "SI-P2-C7-10bp": SI_P2_C7_10bp, "SI-P2-C8-10bp": SI_P2_C8_10bp, "SI-P2-C9-10bp": SI_P2_C9_10bp, "SI-P2-C10-10bp": SI_P2_C10_10bp, "SI-P2-C11-10bp": SI_P2_C11_10bp, "SI-P2-C12-10bp": SI_P2_C12_10bp, "SI-P2-D1-10bp": SI_P2_D1_10bp, "SI-P2-D2-10bp": SI_P2_D2_10bp, "SI-P2-D3-10bp": SI_P2_D3_10bp, "SI-P2-D4-10bp": SI_P2_D4_10bp, "SI-P2-D5-10bp": SI_P2_D5_10bp, "SI-P2-D6-10bp": SI_P2_D6_10bp, "SI-P2-D7-10bp": SI_P2_D7_10bp, "SI-P2-D8-10bp": SI_P2_D8_10bp, "SI-P2-D9-10bp": SI_P2_D9_10bp, "SI-P2-D10-10bp": SI_P2_D10_10bp, "SI-P2-D11-10bp": SI_P2_D11_10bp, "SI-P2-D12-10bp": SI_P2_D12_10bp, "SI-P2-E1-10bp": SI_P2_E1_10bp, "SI-P2-E2-10bp": SI_P2_E2_10bp, "SI-P2-E3-10bp": SI_P2_E3_10bp, "SI-P2-E4-10bp": SI_P2_E4_10bp, "SI-P2-E5-10bp": SI_P2_E5_10bp, "SI-P2-E6-10bp": SI_P2_E6_10bp, "SI-P2-E7-10bp": SI_P2_E7_10bp, "SI-P2-E8-10bp": SI_P2_E8_10bp, "SI-P2-E9-10bp": SI_P2_E9_10bp, "SI-P2-E10-10bp": SI_P2_E10_10bp, "SI-P2-E11-10bp": SI_P2_E11_10bp, "SI-P2-E12-10bp": SI_P2_E12_10bp, "SI-P2-F1-10bp": SI_P2_F1_10bp, "SI-P2-F2-10bp": SI_P2_F2_10bp, "SI-P2-F3-10bp": SI_P2_F3_10bp, "SI-P2-F4-10bp": SI_P2_F4_10bp, "SI-P2-F5-10bp": SI_P2_F5_10bp, "SI-P2-F6-10bp": SI_P2_F6_10bp, "SI-P2-F7-10bp": SI_P2_F7_10bp, "SI-P2-F8-10bp": SI_P2_F8_10bp, "SI-P2-F9-10bp": SI_P2_F9_10bp, "SI-P2-F10-10bp": SI_P2_F10_10bp, "SI-P2-F11-10bp": SI_P2_F11_10bp, "SI-P2-F12-10bp": SI_P2_F12_10bp, "SI-P2-G1-10bp": SI_P2_G1_10bp, "SI-P2-G2-10bp": SI_P2_G2_10bp, "SI-P2-G3-10bp": SI_P2_G3_10bp, "SI-P2-G4-10bp": SI_P2_G4_10bp, "SI-P2-G5-10bp": SI_P2_G5_10bp, "SI-P2-G6-10bp": SI_P2_G6_10bp, "SI-P2-G7-10bp": SI_P2_G7_10bp, "SI-P2-G8-10bp": SI_P2_G8_10bp, "SI-P2-G9-10bp": SI_P2_G9_10bp, "SI-P2-G10-10bp": SI_P2_G10_10bp, "SI-P2-G11-10bp": SI_P2_G11_10bp, "SI-P2-G12-10bp": SI_P2_G12_10bp, "SI-P2-H1-10bp": SI_P2_H1_10bp, "SI-P2-H2-10bp": SI_P2_H2_10bp, "SI-P2-H3-10bp": SI_P2_H3_10bp, "SI-P2-H4-10bp": SI_P2_H4_10bp, "SI-P2-H5-10bp": SI_P2_H5_10bp, "SI-P2-H6-10bp": SI_P2_H6_10bp, "SI-P2-H7-10bp": SI_P2_H7_10bp, "SI-P2-H8-10bp": SI_P2_H8_10bp, "SI-P2-H9-10bp": SI_P2_H9_10bp, "SI-P2-H10-10bp": SI_P2_H10_10bp, "SI-P2-H11-10bp": SI_P2_H11_10bp, "SI-P2-H12-10bp": SI_P2_H12_10bp, # WGS+ Plate Label alternate "SI-P02-A1": SI_P2_A1, "SI-P02-A2": SI_P2_A2, "SI-P02-A3": SI_P2_A3, "SI-P02-A4": SI_P2_A4, "SI-P02-A5": SI_P2_A5, "SI-P02-A6": SI_P2_A6, "SI-P02-A7": SI_P2_A7, "SI-P02-A8": SI_P2_A8, "SI-P02-A9": SI_P2_A9, "SI-P02-A10": SI_P2_A10, "SI-P02-A11": SI_P2_A11, "SI-P02-A12": SI_P2_A12, "SI-P02-B1": SI_P2_B1, "SI-P02-B2": SI_P2_B2, "SI-P02-B3": SI_P2_B3, "SI-P02-B4": SI_P2_B4, "SI-P02-B5": SI_P2_B5, "SI-P02-B6": SI_P2_B6, "SI-P02-B7": SI_P2_B7, "SI-P02-B8": SI_P2_B8, "SI-P02-B9": SI_P2_B9, "SI-P02-B10": SI_P2_B10, "SI-P02-B11": SI_P2_B11, "SI-P02-B12": SI_P2_B12, "SI-P02-C1": SI_P2_C1, "SI-P02-C2": SI_P2_C2, "SI-P02-C3": SI_P2_C3, "SI-P02-C4": SI_P2_C4, "SI-P02-C5": SI_P2_C5, "SI-P02-C6": SI_P2_C6, "SI-P02-C7": SI_P2_C7, "SI-P02-C8": SI_P2_C8, "SI-P02-C9": SI_P2_C9, "SI-P02-C10": SI_P2_C10, "SI-P02-C11": SI_P2_C11, "SI-P02-C12": SI_P2_C12, "SI-P02-D1": SI_P2_D1, "SI-P02-D2": SI_P2_D2, "SI-P02-D3": SI_P2_D3, "SI-P02-D4": SI_P2_D4, "SI-P02-D5": SI_P2_D5, "SI-P02-D6": SI_P2_D6, "SI-P02-D7": SI_P2_D7, "SI-P02-D8": SI_P2_D8, "SI-P02-D9": SI_P2_D9, "SI-P02-D10": SI_P2_D10, "SI-P02-D11": SI_P2_D11, "SI-P02-D12": SI_P2_D12, "SI-P02-E1": SI_P2_E1, "SI-P02-E2": SI_P2_E2, "SI-P02-E3": SI_P2_E3, "SI-P02-E4": SI_P2_E4, "SI-P02-E5": SI_P2_E5, "SI-P02-E6": SI_P2_E6, "SI-P02-E7": SI_P2_E7, "SI-P02-E8": SI_P2_E8, "SI-P02-E9": SI_P2_E9, "SI-P02-E10": SI_P2_E10, "SI-P02-E11": SI_P2_E11, "SI-P02-E12": SI_P2_E12, "SI-P02-F1": SI_P2_F1, "SI-P02-F2": SI_P2_F2, "SI-P02-F3": SI_P2_F3, "SI-P02-F4": SI_P2_F4, "SI-P02-F5": SI_P2_F5, "SI-P02-F6": SI_P2_F6, "SI-P02-F7": SI_P2_F7, "SI-P02-F8": SI_P2_F8, "SI-P02-F9": SI_P2_F9, "SI-P02-F10": SI_P2_F10, "SI-P02-F11": SI_P2_F11, "SI-P02-F12": SI_P2_F12, "SI-P02-G1": SI_P2_G1, "SI-P02-G2": SI_P2_G2, "SI-P02-G3": SI_P2_G3, "SI-P02-G4": SI_P2_G4, "SI-P02-G5": SI_P2_G5, "SI-P02-G6": SI_P2_G6, "SI-P02-G7": SI_P2_G7, "SI-P02-G8": SI_P2_G8, "SI-P02-G9": SI_P2_G9, "SI-P02-G10": SI_P2_G10, "SI-P02-G11": SI_P2_G11, "SI-P02-G12": SI_P2_G12, "SI-P02-H1": SI_P2_H1, "SI-P02-H2": SI_P2_H2, "SI-P02-H3": SI_P2_H3, "SI-P02-H4": SI_P2_H4, "SI-P02-H5": SI_P2_H5, "SI-P02-H6": SI_P2_H6, "SI-P02-H7": SI_P2_H7, "SI-P02-H8": SI_P2_H8, "SI-P02-H9": SI_P2_H9, "SI-P02-H10": SI_P2_H10, "SI-P02-H11": SI_P2_H11, "SI-P02-H12": SI_P2_H12, # T1T2 (used single ended by QC) **{ sys.intern(f"SI-TT-{c}{i}"): globals()[f"SI_TT_{c}{i}"] for i in range(1, 13) for c in "ABCDEFGH" }, } SAMPLE_SINGLE_INDEX_MAP = SAMPLE_INDEX_MAP SAMPLE_DUAL_INDEX_MAP = { # T1T2 (shipping with SR 1.0) "SI-TT-A1": SI_TT_A1, "SI-TT-A2": SI_TT_A2, "SI-TT-A3": SI_TT_A3, "SI-TT-A4": SI_TT_A4, "SI-TT-A5": SI_TT_A5, "SI-TT-A6": SI_TT_A6, "SI-TT-A7": SI_TT_A7, "SI-TT-A8": SI_TT_A8, "SI-TT-A9": SI_TT_A9, "SI-TT-A10": SI_TT_A10, "SI-TT-A11": SI_TT_A11, "SI-TT-A12": SI_TT_A12, "SI-TT-B1": SI_TT_B1, "SI-TT-B2": SI_TT_B2, "SI-TT-B3": SI_TT_B3, "SI-TT-B4": SI_TT_B4, "SI-TT-B5": SI_TT_B5, "SI-TT-B6": SI_TT_B6, "SI-TT-B7": SI_TT_B7, "SI-TT-B8": SI_TT_B8, "SI-TT-B9": SI_TT_B9, "SI-TT-B10": SI_TT_B10, "SI-TT-B11": SI_TT_B11, "SI-TT-B12": SI_TT_B12, "SI-TT-C1": SI_TT_C1, "SI-TT-C2": SI_TT_C2, "SI-TT-C3": SI_TT_C3, "SI-TT-C4": SI_TT_C4, "SI-TT-C5": SI_TT_C5, "SI-TT-C6": SI_TT_C6, "SI-TT-C7": SI_TT_C7, "SI-TT-C8": SI_TT_C8, "SI-TT-C9": SI_TT_C9, "SI-TT-C10": SI_TT_C10, "SI-TT-C11": SI_TT_C11, "SI-TT-C12": SI_TT_C12, "SI-TT-D1": SI_TT_D1, "SI-TT-D2": SI_TT_D2, "SI-TT-D3": SI_TT_D3, "SI-TT-D4": SI_TT_D4, "SI-TT-D5": SI_TT_D5, "SI-TT-D6": SI_TT_D6, "SI-TT-D7": SI_TT_D7, "SI-TT-D8": SI_TT_D8, "SI-TT-D9": SI_TT_D9, "SI-TT-D10": SI_TT_D10, "SI-TT-D11": SI_TT_D11, "SI-TT-D12": SI_TT_D12, "SI-TT-E1": SI_TT_E1, "SI-TT-E2": SI_TT_E2, "SI-TT-E3": SI_TT_E3, "SI-TT-E4": SI_TT_E4, "SI-TT-E5": SI_TT_E5, "SI-TT-E6": SI_TT_E6, "SI-TT-E7": SI_TT_E7, "SI-TT-E8": SI_TT_E8, "SI-TT-E9": SI_TT_E9, "SI-TT-E10": SI_TT_E10, "SI-TT-E11": SI_TT_E11, "SI-TT-E12": SI_TT_E12, "SI-TT-F1": SI_TT_F1, "SI-TT-F2": SI_TT_F2, "SI-TT-F3": SI_TT_F3, "SI-TT-F4": SI_TT_F4, "SI-TT-F5": SI_TT_F5, "SI-TT-F6": SI_TT_F6, "SI-TT-F7": SI_TT_F7, "SI-TT-F8": SI_TT_F8, "SI-TT-F9": SI_TT_F9, "SI-TT-F10": SI_TT_F10, "SI-TT-F11": SI_TT_F11, "SI-TT-F12": SI_TT_F12, "SI-TT-G1": SI_TT_G1, "SI-TT-G2": SI_TT_G2, "SI-TT-G3": SI_TT_G3, "SI-TT-G4": SI_TT_G4, "SI-TT-G5": SI_TT_G5, "SI-TT-G6": SI_TT_G6, "SI-TT-G7": SI_TT_G7, "SI-TT-G8": SI_TT_G8, "SI-TT-G9": SI_TT_G9, "SI-TT-G10": SI_TT_G10, "SI-TT-G11": SI_TT_G11, "SI-TT-G12": SI_TT_G12, "SI-TT-H1": SI_TT_H1, "SI-TT-H2": SI_TT_H2, "SI-TT-H3": SI_TT_H3, "SI-TT-H4": SI_TT_H4, "SI-TT-H5": SI_TT_H5, "SI-TT-H6": SI_TT_H6, "SI-TT-H7": SI_TT_H7, "SI-TT-H8": SI_TT_H8, "SI-TT-H9": SI_TT_H9, "SI-TT-H10": SI_TT_H10, "SI-TT-H11": SI_TT_H11, "SI-TT-H12": SI_TT_H12, "SI-TN-A1": SI_TN_A1, "SI-TN-A2": SI_TN_A2, "SI-TN-A3": SI_TN_A3, "SI-TN-A4": SI_TN_A4, "SI-TN-A5": SI_TN_A5, "SI-TN-A6": SI_TN_A6, "SI-TN-A7": SI_TN_A7, "SI-TN-A8": SI_TN_A8, "SI-TN-A9": SI_TN_A9, "SI-TN-A10": SI_TN_A10, "SI-TN-A11": SI_TN_A11, "SI-TN-A12": SI_TN_A12, "SI-TN-B1": SI_TN_B1, "SI-TN-B2": SI_TN_B2, "SI-TN-B3": SI_TN_B3, "SI-TN-B4": SI_TN_B4, "SI-TN-B5": SI_TN_B5, "SI-TN-B6": SI_TN_B6, "SI-TN-B7": SI_TN_B7, "SI-TN-B8": SI_TN_B8, "SI-TN-B9": SI_TN_B9, "SI-TN-B10": SI_TN_B10, "SI-TN-B11": SI_TN_B11, "SI-TN-B12": SI_TN_B12, "SI-TN-C1": SI_TN_C1, "SI-TN-C2": SI_TN_C2, "SI-TN-C3": SI_TN_C3, "SI-TN-C4": SI_TN_C4, "SI-TN-C5": SI_TN_C5, "SI-TN-C6": SI_TN_C6, "SI-TN-C7": SI_TN_C7, "SI-TN-C8": SI_TN_C8, "SI-TN-C9": SI_TN_C9, "SI-TN-C10": SI_TN_C10, "SI-TN-C11": SI_TN_C11, "SI-TN-C12": SI_TN_C12, "SI-TN-D1": SI_TN_D1, "SI-TN-D2": SI_TN_D2, "SI-TN-D3": SI_TN_D3, "SI-TN-D4": SI_TN_D4, "SI-TN-D5": SI_TN_D5, "SI-TN-D6": SI_TN_D6, "SI-TN-D7": SI_TN_D7, "SI-TN-D8": SI_TN_D8, "SI-TN-D9": SI_TN_D9, "SI-TN-D10": SI_TN_D10, "SI-TN-D11": SI_TN_D11, "SI-TN-D12": SI_TN_D12, "SI-TN-E1": SI_TN_E1, "SI-TN-E2": SI_TN_E2, "SI-TN-E3": SI_TN_E3, "SI-TN-E4": SI_TN_E4, "SI-TN-E5": SI_TN_E5, "SI-TN-E6": SI_TN_E6, "SI-TN-E7": SI_TN_E7, "SI-TN-E8": SI_TN_E8, "SI-TN-E9": SI_TN_E9, "SI-TN-E10": SI_TN_E10, "SI-TN-E11": SI_TN_E11, "SI-TN-E12": SI_TN_E12, "SI-TN-F1": SI_TN_F1, "SI-TN-F2": SI_TN_F2, "SI-TN-F3": SI_TN_F3, "SI-TN-F4": SI_TN_F4, "SI-TN-F5": SI_TN_F5, "SI-TN-F6": SI_TN_F6, "SI-TN-F7": SI_TN_F7, "SI-TN-F8": SI_TN_F8, "SI-TN-F9": SI_TN_F9, "SI-TN-F10": SI_TN_F10, "SI-TN-F11": SI_TN_F11, "SI-TN-F12": SI_TN_F12, "SI-TN-G1": SI_TN_G1, "SI-TN-G2": SI_TN_G2, "SI-TN-G3": SI_TN_G3, "SI-TN-G4": SI_TN_G4, "SI-TN-G5": SI_TN_G5, "SI-TN-G6": SI_TN_G6, "SI-TN-G7": SI_TN_G7, "SI-TN-G8": SI_TN_G8, "SI-TN-G9": SI_TN_G9, "SI-TN-G10": SI_TN_G10, "SI-TN-G11": SI_TN_G11, "SI-TN-G12": SI_TN_G12, "SI-TN-H1": SI_TN_H1, "SI-TN-H2": SI_TN_H2, "SI-TN-H3": SI_TN_H3, "SI-TN-H4": SI_TN_H4, "SI-TN-H5": SI_TN_H5, "SI-TN-H6": SI_TN_H6, "SI-TN-H7": SI_TN_H7, "SI-TN-H8": SI_TN_H8, "SI-TN-H9": SI_TN_H9, "SI-TN-H10": SI_TN_H10, "SI-TN-H11": SI_TN_H11, "SI-TN-H12": SI_TN_H12, "SI-NT-A1": SI_NT_A1, "SI-NT-A2": SI_NT_A2, "SI-NT-A3": SI_NT_A3, "SI-NT-A4": SI_NT_A4, "SI-NT-A5": SI_NT_A5, "SI-NT-A6": SI_NT_A6, "SI-NT-A7": SI_NT_A7, "SI-NT-A8": SI_NT_A8, "SI-NT-A9": SI_NT_A9, "SI-NT-A10": SI_NT_A10, "SI-NT-A11": SI_NT_A11, "SI-NT-A12": SI_NT_A12, "SI-NT-B1": SI_NT_B1, "SI-NT-B2": SI_NT_B2, "SI-NT-B3": SI_NT_B3, "SI-NT-B4": SI_NT_B4, "SI-NT-B5": SI_NT_B5, "SI-NT-B6": SI_NT_B6, "SI-NT-B7": SI_NT_B7, "SI-NT-B8": SI_NT_B8, "SI-NT-B9": SI_NT_B9, "SI-NT-B10": SI_NT_B10, "SI-NT-B11": SI_NT_B11, "SI-NT-B12": SI_NT_B12, "SI-NT-C1": SI_NT_C1, "SI-NT-C2": SI_NT_C2, "SI-NT-C3": SI_NT_C3, "SI-NT-C4": SI_NT_C4, "SI-NT-C5": SI_NT_C5, "SI-NT-C6": SI_NT_C6, "SI-NT-C7": SI_NT_C7, "SI-NT-C8": SI_NT_C8, "SI-NT-C9": SI_NT_C9, "SI-NT-C10": SI_NT_C10, "SI-NT-C11": SI_NT_C11, "SI-NT-C12": SI_NT_C12, "SI-NT-D1": SI_NT_D1, "SI-NT-D2": SI_NT_D2, "SI-NT-D3": SI_NT_D3, "SI-NT-D4": SI_NT_D4, "SI-NT-D5": SI_NT_D5, "SI-NT-D6": SI_NT_D6, "SI-NT-D7": SI_NT_D7, "SI-NT-D8": SI_NT_D8, "SI-NT-D9": SI_NT_D9, "SI-NT-D10": SI_NT_D10, "SI-NT-D11": SI_NT_D11, "SI-NT-D12": SI_NT_D12, "SI-NT-E1": SI_NT_E1, "SI-NT-E2": SI_NT_E2, "SI-NT-E3": SI_NT_E3, "SI-NT-E4": SI_NT_E4, "SI-NT-E5": SI_NT_E5, "SI-NT-E6": SI_NT_E6, "SI-NT-E7": SI_NT_E7, "SI-NT-E8": SI_NT_E8, "SI-NT-E9": SI_NT_E9, "SI-NT-E10": SI_NT_E10, "SI-NT-E11": SI_NT_E11, "SI-NT-E12": SI_NT_E12, "SI-NT-F1": SI_NT_F1, "SI-NT-F2": SI_NT_F2, "SI-NT-F3": SI_NT_F3, "SI-NT-F4": SI_NT_F4, "SI-NT-F5": SI_NT_F5, "SI-NT-F6": SI_NT_F6, "SI-NT-F7": SI_NT_F7, "SI-NT-F8": SI_NT_F8, "SI-NT-F9": SI_NT_F9, "SI-NT-F10": SI_NT_F10, "SI-NT-F11": SI_NT_F11, "SI-NT-F12": SI_NT_F12, "SI-NT-G1": SI_NT_G1, "SI-NT-G2": SI_NT_G2, "SI-NT-G3": SI_NT_G3, "SI-NT-G4": SI_NT_G4, "SI-NT-G5": SI_NT_G5, "SI-NT-G6": SI_NT_G6, "SI-NT-G7": SI_NT_G7, "SI-NT-G8": SI_NT_G8, "SI-NT-G9": SI_NT_G9, "SI-NT-G10": SI_NT_G10, "SI-NT-G11": SI_NT_G11, "SI-NT-G12": SI_NT_G12, "SI-NT-H1": SI_NT_H1, "SI-NT-H2": SI_NT_H2, "SI-NT-H3": SI_NT_H3, "SI-NT-H4": SI_NT_H4, "SI-NT-H5": SI_NT_H5, "SI-NT-H6": SI_NT_H6, "SI-NT-H7": SI_NT_H7, "SI-NT-H8": SI_NT_H8, "SI-NT-H9": SI_NT_H9, "SI-NT-H10": SI_NT_H10, "SI-NT-H11": SI_NT_H11, "SI-NT-H12": SI_NT_H12, "SI-NN-A1": SI_NN_A1, "SI-NN-A2": SI_NN_A2, "SI-NN-A3": SI_NN_A3, "SI-NN-A4": SI_NN_A4, "SI-NN-A5": SI_NN_A5, "SI-NN-A6": SI_NN_A6, "SI-NN-A7": SI_NN_A7, "SI-NN-A8": SI_NN_A8, "SI-NN-A9": SI_NN_A9, "SI-NN-A10": SI_NN_A10, "SI-NN-A11": SI_NN_A11, "SI-NN-A12": SI_NN_A12, "SI-NN-B1": SI_NN_B1, "SI-NN-B2": SI_NN_B2, "SI-NN-B3": SI_NN_B3, "SI-NN-B4": SI_NN_B4, "SI-NN-B5": SI_NN_B5, "SI-NN-B6": SI_NN_B6, "SI-NN-B7": SI_NN_B7, "SI-NN-B8": SI_NN_B8, "SI-NN-B9": SI_NN_B9, "SI-NN-B10": SI_NN_B10, "SI-NN-B11": SI_NN_B11, "SI-NN-B12": SI_NN_B12, "SI-NN-C1": SI_NN_C1, "SI-NN-C2": SI_NN_C2, "SI-NN-C3": SI_NN_C3, "SI-NN-C4": SI_NN_C4, "SI-NN-C5": SI_NN_C5, "SI-NN-C6": SI_NN_C6, "SI-NN-C7": SI_NN_C7, "SI-NN-C8": SI_NN_C8, "SI-NN-C9": SI_NN_C9, "SI-NN-C10": SI_NN_C10, "SI-NN-C11": SI_NN_C11, "SI-NN-C12": SI_NN_C12, "SI-NN-D1": SI_NN_D1, "SI-NN-D2": SI_NN_D2, "SI-NN-D3": SI_NN_D3, "SI-NN-D4": SI_NN_D4, "SI-NN-D5": SI_NN_D5, "SI-NN-D6": SI_NN_D6, "SI-NN-D7": SI_NN_D7, "SI-NN-D8": SI_NN_D8, "SI-NN-D9": SI_NN_D9, "SI-NN-D10": SI_NN_D10, "SI-NN-D11": SI_NN_D11, "SI-NN-D12": SI_NN_D12, "SI-NN-E1": SI_NN_E1, "SI-NN-E2": SI_NN_E2, "SI-NN-E3": SI_NN_E3, "SI-NN-E4": SI_NN_E4, "SI-NN-E5": SI_NN_E5, "SI-NN-E6": SI_NN_E6, "SI-NN-E7": SI_NN_E7, "SI-NN-E8": SI_NN_E8, "SI-NN-E9": SI_NN_E9, "SI-NN-E10": SI_NN_E10, "SI-NN-E11": SI_NN_E11, "SI-NN-E12": SI_NN_E12, "SI-NN-F1": SI_NN_F1, "SI-NN-F2": SI_NN_F2, "SI-NN-F3": SI_NN_F3, "SI-NN-F4": SI_NN_F4, "SI-NN-F5": SI_NN_F5, "SI-NN-F6": SI_NN_F6, "SI-NN-F7": SI_NN_F7, "SI-NN-F8": SI_NN_F8, "SI-NN-F9": SI_NN_F9, "SI-NN-F10": SI_NN_F10, "SI-NN-F11": SI_NN_F11, "SI-NN-F12": SI_NN_F12, "SI-NN-G1": SI_NN_G1, "SI-NN-G2": SI_NN_G2, "SI-NN-G3": SI_NN_G3, "SI-NN-G4": SI_NN_G4, "SI-NN-G5": SI_NN_G5, "SI-NN-G6": SI_NN_G6, "SI-NN-G7": SI_NN_G7, "SI-NN-G8": SI_NN_G8, "SI-NN-G9": SI_NN_G9, "SI-NN-G10": SI_NN_G10, "SI-NN-G11": SI_NN_G11, "SI-NN-G12": SI_NN_G12, "SI-NN-H1": SI_NN_H1, "SI-NN-H2": SI_NN_H2, "SI-NN-H3": SI_NN_H3, "SI-NN-H4": SI_NN_H4, "SI-NN-H5": SI_NN_H5, "SI-NN-H6": SI_NN_H6, "SI-NN-H7": SI_NN_H7, "SI-NN-H8": SI_NN_H8, "SI-NN-H9": SI_NN_H9, "SI-NN-H10": SI_NN_H10, "SI-NN-H11": SI_NN_H11, "SI-NN-H12": SI_NN_H12, "SI-TS-A1": SI_TS_A1, "SI-TS-A2": SI_TS_A2, "SI-TS-A3": SI_TS_A3, "SI-TS-A4": SI_TS_A4, "SI-TS-A5": SI_TS_A5, "SI-TS-A6": SI_TS_A6, "SI-TS-A7": SI_TS_A7, "SI-TS-A8": SI_TS_A8, "SI-TS-A9": SI_TS_A9, "SI-TS-A10": SI_TS_A10, "SI-TS-A11": SI_TS_A11, "SI-TS-A12": SI_TS_A12, "SI-TS-B1": SI_TS_B1, "SI-TS-B2": SI_TS_B2, "SI-TS-B3": SI_TS_B3, "SI-TS-B4": SI_TS_B4, "SI-TS-B5": SI_TS_B5, "SI-TS-B6": SI_TS_B6, "SI-TS-B7": SI_TS_B7, "SI-TS-B8": SI_TS_B8, "SI-TS-B9": SI_TS_B9, "SI-TS-B10": SI_TS_B10, "SI-TS-B11": SI_TS_B11, "SI-TS-B12": SI_TS_B12, "SI-TS-C1": SI_TS_C1, "SI-TS-C2": SI_TS_C2, "SI-TS-C3": SI_TS_C3, "SI-TS-C4": SI_TS_C4, "SI-TS-C5": SI_TS_C5, "SI-TS-C6": SI_TS_C6, "SI-TS-C7": SI_TS_C7, "SI-TS-C8": SI_TS_C8, "SI-TS-C9": SI_TS_C9, "SI-TS-C10": SI_TS_C10, "SI-TS-C11": SI_TS_C11, "SI-TS-C12": SI_TS_C12, "SI-TS-D1": SI_TS_D1, "SI-TS-D2": SI_TS_D2, "SI-TS-D3": SI_TS_D3, "SI-TS-D4": SI_TS_D4, "SI-TS-D5": SI_TS_D5, "SI-TS-D6": SI_TS_D6, "SI-TS-D7": SI_TS_D7, "SI-TS-D8": SI_TS_D8, "SI-TS-D9": SI_TS_D9, "SI-TS-D10": SI_TS_D10, "SI-TS-D11": SI_TS_D11, "SI-TS-D12": SI_TS_D12, "SI-TS-E1": SI_TS_E1, "SI-TS-E2": SI_TS_E2, "SI-TS-E3": SI_TS_E3, "SI-TS-E4": SI_TS_E4, "SI-TS-E5": SI_TS_E5, "SI-TS-E6": SI_TS_E6, "SI-TS-E7": SI_TS_E7, "SI-TS-E8": SI_TS_E8, "SI-TS-E9": SI_TS_E9, "SI-TS-E10": SI_TS_E10, "SI-TS-E11": SI_TS_E11, "SI-TS-E12": SI_TS_E12, "SI-TS-F1": SI_TS_F1, "SI-TS-F2": SI_TS_F2, "SI-TS-F3": SI_TS_F3, "SI-TS-F4": SI_TS_F4, "SI-TS-F5": SI_TS_F5, "SI-TS-F6": SI_TS_F6, "SI-TS-F7": SI_TS_F7, "SI-TS-F8": SI_TS_F8, "SI-TS-F9": SI_TS_F9, "SI-TS-F10": SI_TS_F10, "SI-TS-F11": SI_TS_F11, "SI-TS-F12": SI_TS_F12, "SI-TS-G1": SI_TS_G1, "SI-TS-G2": SI_TS_G2, "SI-TS-G3": SI_TS_G3, "SI-TS-G4": SI_TS_G4, "SI-TS-G5": SI_TS_G5, "SI-TS-G6": SI_TS_G6, "SI-TS-G7": SI_TS_G7, "SI-TS-G8": SI_TS_G8, "SI-TS-G9": SI_TS_G9, "SI-TS-G10": SI_TS_G10, "SI-TS-G11": SI_TS_G11, "SI-TS-G12": SI_TS_G12, "SI-TS-H1": SI_TS_H1, "SI-TS-H2": SI_TS_H2, "SI-TS-H3": SI_TS_H3, "SI-TS-H4": SI_TS_H4, "SI-TS-H5": SI_TS_H5, "SI-TS-H6": SI_TS_H6, "SI-TS-H7": SI_TS_H7, "SI-TS-H8": SI_TS_H8, "SI-TS-H9": SI_TS_H9, "SI-TS-H10": SI_TS_H10, "SI-TS-H11": SI_TS_H11, "SI-TS-H12": SI_TS_H12, # NEB #E7874; A1 - A6 wells "SI-NEB7874-A1": SI_NEB7874_A1, "SI-NEB7874-B1": SI_NEB7874_B1, "SI-NEB7874-C1": SI_NEB7874_C1, "SI-NEB7874-D1": SI_NEB7874_D1, "SI-NEB7874-E1": SI_NEB7874_E1, "SI-NEB7874-F1": SI_NEB7874_F1, "SI-NEB7874-G1": SI_NEB7874_G1, "SI-NEB7874-H1": SI_NEB7874_H1, "SI-NEB7874-A2": SI_NEB7874_A2, "SI-NEB7874-B2": SI_NEB7874_B2, "SI-NEB7874-C2": SI_NEB7874_C2, "SI-NEB7874-D2": SI_NEB7874_D2, "SI-NEB7874-E2": SI_NEB7874_E2, "SI-NEB7874-F2": SI_NEB7874_F2, "SI-NEB7874-G2": SI_NEB7874_G2, "SI-NEB7874-H2": SI_NEB7874_H2, "SI-NEB7874-A3": SI_NEB7874_A3, "SI-NEB7874-B3": SI_NEB7874_B3, "SI-NEB7874-C3": SI_NEB7874_C3, "SI-NEB7874-D3": SI_NEB7874_D3, "SI-NEB7874-E3": SI_NEB7874_E3, "SI-NEB7874-F3": SI_NEB7874_F3, "SI-NEB7874-G3": SI_NEB7874_G3, "SI-NEB7874-H3": SI_NEB7874_H3, "SI-NEB7874-A4": SI_NEB7874_A4, "SI-NEB7874-B4": SI_NEB7874_B4, "SI-NEB7874-C4": SI_NEB7874_C4, "SI-NEB7874-D4": SI_NEB7874_D4, "SI-NEB7874-E4": SI_NEB7874_E4, "SI-NEB7874-F4": SI_NEB7874_F4, "SI-NEB7874-G4": SI_NEB7874_G4, "SI-NEB7874-H4": SI_NEB7874_H4, "SI-NEB7874-A5": SI_NEB7874_A5, "SI-NEB7874-B5": SI_NEB7874_B5, "SI-NEB7874-C5": SI_NEB7874_C5, "SI-NEB7874-D5": SI_NEB7874_D5, "SI-NEB7874-E5": SI_NEB7874_E5, "SI-NEB7874-F5": SI_NEB7874_F5, "SI-NEB7874-G5": SI_NEB7874_G5, "SI-NEB7874-H5": SI_NEB7874_H5, "SI-NEB7874-A6": SI_NEB7874_A6, "SI-NEB7874-B6": SI_NEB7874_B6, "SI-NEB7874-C6": SI_NEB7874_C6, "SI-NEB7874-D6": SI_NEB7874_D6, "SI-NEB7874-E6": SI_NEB7874_E6, "SI-NEB7874-F6": SI_NEB7874_F6, "SI-NEB7874-G6": SI_NEB7874_G6, "SI-NEB7874-H6": SI_NEB7874_H6, } # Chromium lot-specific oligos CHROMIUM_LOT1_PART_A = [ "AGAGCGA", "CGATTGA", "TAGACCA", "AAATGCC", "CTTTGCG", "TCAGCAA", "CTCCTAG", "ATTATCC", ] CHROMIUM_LOT2_PART_A = [ "GACACTA", "CCCTCTC", "ATCGCGG", "CTGGCAG", "CCAGCTT", "CATAGCA", "CGTGTTC", "GCACCAG", ] CHROMIUM_LOT3_PART_A = [ "ATGTGAC", "GACGTCG", "ACTGGCG", "TGGCAAT", "GAGGGTA", "GTTTCGC", "CAAGTGT", "TTGAAGC", ] CHROMIUM_LOT4_PART_A = [ "CGATCCT", "TGTTGCC", "ACCTATT", "ACAACTG", "CTGTGTC", "CTGGAAT", "CAGAGTT", "GGGCTGT", ] CHROMIUM_LOT5_PART_A = [ "TAGCTCC", "CAATTTC", "GCTCGAG", "GAAGGCA", "CGGCATG", "TATTCCA", "TCTCTGG", "AGGTACT", ] CHROMIUM_LOT6_PART_A = [ "ACTTGCC", "GTGAGTT", "GTTGTCC", "CATAACG", "TCGTAAG", "TTATCCA", "GTGGAGA", "TCCTGCA", ] CHROMIUM_LOT7_PART_A = [ "TAAGCCA", "TCGGTGG", "AAGGTAA", "GGAACAG", "GTGGAAG", "TTAGACG", "ATCCTAT", "TTCCGTG", ] CHROMIUM_LOT8_PART_A = [ "GGTTTAG", "CGTATAG", "ATAGGCT", "CTCTCGA", "GTCTTAT", "GATTGCA", "TGAGCTA", "ACGCGTG", ] CHROMIUM_LOT9_PART_A = [ "CGACACG", "TCTCGTG", "TGATGAC", "TGCGTAA", "TACCCTG", "AGGTGCC", "CTTGTGC", "GCATGGC", ] CHROMIUM_LOT10_PART_A = [ "CAGCACG", "CATGATG", "ATCAACG", "GATAAGA", "CTGGTTC", "CGATTCC", "AGGTGAG", "GGCCTGA", ] CHROMIUM_LOT11_PART_A = [ "ACAGTTG", "TAAGCAC", "ATCTTTG", "TCTTGCG", "TACATGG", "CAAGGTT", "AGGCTGC", "GGTCGTG", ] CHROMIUM_LOT12_PART_A = [ "CCATTAT", "GTTGCGG", "AGGGTAG", "GCCCAAG", "TGTGCCT", "ATTCTTG", "GGTGCCA", "GTATAGC", ] CHROMIUM_LOT13_PART_A = [ "GGCATCG", "GACTGAT", "TGGTGTA", "TCCGTTG", "CCTTCAG", "CAGGCCA", "GCACCGA", "AGATCCA", ] CHROMIUM_LOT_MAP = { "Chromium Lot 1": CHROMIUM_LOT1_PART_A, "Chromium Lot 2": CHROMIUM_LOT2_PART_A, "Chromium Lot 3": CHROMIUM_LOT3_PART_A, "Chromium Lot 4": CHROMIUM_LOT4_PART_A, "Chromium Lot 5": CHROMIUM_LOT5_PART_A, "Chromium Lot 6": CHROMIUM_LOT6_PART_A, "Chromium Lot 7": CHROMIUM_LOT7_PART_A, "Chromium Lot 8": CHROMIUM_LOT8_PART_A, "Chromium Lot 9": CHROMIUM_LOT9_PART_A, "Chromium Lot 10": CHROMIUM_LOT10_PART_A, "Chromium Lot 11": CHROMIUM_LOT11_PART_A, "Chromium Lot 12": CHROMIUM_LOT12_PART_A, "Chromium Lot 13": CHROMIUM_LOT13_PART_A, } # GemCode lot-specific oligos # note: lots 1-15 all use the same part As GEMCODE_LOT1_PART_A = [ "GGGTGA", "TTCATC", "CACAAC", "GAAGAT", "CAGCAT", "CGTCAA", "GAAACA", "TGTTTC", ] GEMCODE_LOT16_PART_A = [ "CAAGTC", "ACAAAG", "CTGGAT", "TTGTCT", "AGCCTA", "GGGAAC", "TTCCTA", "CCGTAA", ] GEMCODE_LOT17_PART_A = [ "AGTCCA", "CAGGAG", "CAATGC", "CAATCG", "AACAGA", "TTACTC", "ACTGAC", "TAAGCC", ] GEMCODE_LOT18_PART_A = [ "GCATGT", "CCAACA", "TCGGTA", "ATCGTG", "ATTCTC", "CGTTAG", "TTCACT", "GGTTTG", ] GEMCODE_LOT19_PART_A = [ "CTTTCA", "TTGTTC", "TAGCCA", "GCGTAT", "CGTACA", "CCTTCG", "CACACA", "TACTTC", ] GEMCODE_LOT20_PART_A = [ "CTTCAT", "ATTCCT", "GTCTCC", "CAGGGA", "ATCCGA", "CGAATC", "AAACCC", "CGCTAA", ] GEMCODE_LOT21_PART_A = [ "CAGATC", "AATCCG", "TACGTG", "GAACAA", "AGAGCG", "CCAGAT", "CGCTTC", "TTATCC", ] GEMCODE_LOT_MAP = { "GemCode Lots 1-15": GEMCODE_LOT1_PART_A, "GemCode Lot 16": GEMCODE_LOT16_PART_A, "GemCode Lot 17": GEMCODE_LOT17_PART_A, "GemCode Lot 18": GEMCODE_LOT18_PART_A, "GemCode Lot 19": GEMCODE_LOT19_PART_A, "GemCode Lot 20": GEMCODE_LOT20_PART_A, "GemCode Lot 21": GEMCODE_LOT21_PART_A, } # if a whitelist isn't in this map, then assume it doesn't contain the alts and don't try to do lot detection WHITELIST_TO_LOT_MAP = { "884K-november-2015": GEMCODE_LOT_MAP, "4M-with-alts-february-2016": CHROMIUM_LOT_MAP, }