LOCUS       HM138502                1410 bp    cRNA    linear   VRL 22-APR-2010
DEFINITION  Influenza A virus (A/California/07/2009(H1N1)) segment 6
            neuraminidase (NA) gene, complete cds.
ACCESSION   HM138502
VERSION     HM138502.1  GI:295002854
DBLINK      BioProject: PRJNA37813
KEYWORDS    .
SOURCE      Influenza A virus (A/California/07/2009(H1N1))
  ORGANISM  Influenza A virus (A/California/07/2009(H1N1))
            Viruses; ssRNA negative-strand viruses; Orthomyxoviridae;
            Influenzavirus A.
REFERENCE   1  (bases 1 to 1410)
  AUTHORS   Starick,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-APR-2010) Friedrich-Loeffler-Institut, Suedufer 10,
            Greifswald-Insel Riems 17493, Germany
COMMENT     Swine influenza A (H1N1) virus isolated during human swine flu
            outbreak of 2009.
            
            ##GISAID_EpiFlu(TM)Data-START##
            Isolate         :: A/California/07/09
            Subtype         :: H1N1
            Lineage         :: swl
            ##GISAID_EpiFlu(TM)Data-END##
FEATURES             Location/Qualifiers
     source          1..1410
                     /organism="Influenza A virus (A/California/07/2009(H1N1))"
                     /mol_type="viral cRNA"
                     /strain="A/California/07/2009"
                     /serotype="H1N1"
                     /host="Homo sapiens"
                     /db_xref="taxon:641809"
                     /segment="6"
                     /country="USA"
                     /collection_date="09-Apr-2009"
                     /note="lineage: swl"
     gene            1..1410
                     /gene="NA"
     CDS             1..1410
                     /gene="NA"
                     /codon_start=1
                     /product="neuraminidase"
                     /protein_id="ADF58339.1"
                     /db_xref="GI:295002855"
                     /translation="MNPNQKIITIGSVCMTIGMANLILQIGNIISIWISHSIQLGNQN
                     QIETCNQSVITYENNTWVNQTYVNISNTNFAAGQSVVSVKLAGNSSLCPVSGWAIYSK
                     DNSVRIGSKGDVFVIREPFISCSPLECRTFFLTQGALLNDKHSNGTIKDRSPYRTLMS
                     CPIGEVPSPYNSRFESVAWSASACHDGINWLTIGISGPDNGAVAVLKYNGIITDTIKS
                     WRNNILRTQESECACVNGSCFTVMTDGPSNGQASYKIFRIEKGKIVKSVEMNAPNYHY
                     EECSCYPDSSEITCVCRDNWHGSNRPWVSFNQNLEYQIGYICSGIFGDNPRPNDKTGS
                     CGPVSSNGANGVKGFSFKYGNGVWIGRTKSISSRNGFEMIWDPNGWTGTDNNFSIKQD
                     IVGINEWSGYSGSFVQHPELTGLDCIRPCFWVELIRGRPKENTIWTSGSSISFCGVNS
                     DTVGWSWPDGAELPFTIDK"
ORIGIN      
        1 atgaatccaa accaaaagat aataaccatt ggttcggtct gtatgacaat tggaatggct
       61 aacttaatat tacaaattgg aaacataatc tcaatatgga ttagccactc aattcaactt
      121 gggaatcaaa atcagattga aacatgcaat caaagcgtca ttacttatga aaacaacact
      181 tgggtaaatc agacatatgt taacatcagc aacaccaact ttgctgctgg acagtcagtg
      241 gtttccgtga aattagcagg caattcctct ctctgccctg ttagtggatg ggctatatac
      301 agtaaagaca acagtgtaag aatcggttcc aagggggatg tgtttgtcat aagggaacca
      361 ttcatatcat gctccccctt ggaatgcaga accttcttct tgactcaagg ggccttgcta
      421 aatgacaaac attccaatgg aaccattaaa gacaggagcc catatcgaac cctaatgagc
      481 tgtcctattg gtgaagttcc ctctccatac aactcaagat ttgagtcagt cgcttggtca
      541 gcaagtgctt gtcatgatgg catcaattgg ctaacaattg gaatttctgg cccagacaat
      601 ggggcagtgg ctgtgttaaa gtacaacggc ataataacag acactatcaa gagttggaga
      661 aacaatatat tgagaacaca agagtctgaa tgtgcatgtg taaatggttc ttgctttact
      721 gtaatgaccg atggaccaag taatggacag gcctcataca agatcttcag aatagaaaag
      781 ggaaagatag tcaaatcagt cgaaatgaat gcccctaatt atcactatga ggaatgctcc
      841 tgttatcctg attctagtga aatcacatgt gtgtgcaggg ataactggca tggctcgaat
      901 cgaccgtggg tgtctttcaa ccagaatctg gaatatcaga taggatacat atgcagtggg
      961 attttcggag acaatccacg ccctaatgat aagacaggca gttgtggtcc agtatcgtct
     1021 aatggagcaa atggagtaaa agggttttca ttcaaatacg gcaatggtgt ttggataggg
     1081 agaactaaaa gcattagttc aagaaacggt tttgagatga tttgggatcc gaacggatgg
     1141 actgggacag acaataactt ctcaataaag caagatatcg taggaataaa tgagtggtca
     1201 ggatatagcg ggagttttgt tcagcatcca gaactaacag ggctggattg tataagacct
     1261 tgcttctggg ttgaactaat cagagggcga cccaaagaga acacaatctg gactagcggg
     1321 agcagcatat ccttttgtgg tgtaaacagt gacactgtgg gttggtcttg gccagacggt
     1381 gctgagttgc catttaccat tgacaagtaa
//
