tblastn TBLASTN 2.9.0+ Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. nr CAJ99216.1 tim [Helicobacter acinonychis str. Sheeba] 234 BLOSUM62 10 11 1 F 1 CAJ99216.1 tim [Helicobacter acinonychis str. Sheeba] 234 1 gi|109713861|emb|AM260522.1| Helicobacter acinonychis str. Sheeba complete genome, strain Sheeba AM260522 1553927 1 477.633 1228 8.53508e-152 1 234 325802 326503 0 2 234 234 0 234 MTKIAMANFKSAMPIFKSHAYLKELEKTLKPQHCDRVFVFPDFLGLLPNAFLHFTLGVQNAYPKDCGAFTGEITSKHLEELKINTLLIGHSERRVLLKESPNFLKEKFDFFKDKKFKIVYCIGEDLKTREKGLGAVKEFLNEQLENIDLDYQNLIVAYEPIWAIGTGKSASLEDIYLTHGFLKQHLNQKMPLLYGGSVNTQNAKEILGIDSVDGLLIGSTSLELENFKTIISFL MTKIAMANFKSAMPIFKSHAYLKELEKTLKPQHCDRVFVFPDFLGLLPNAFLHFTLGVQNAYPKDCGAFTGEITSKHLEELKINTLLIGHSERRVLLKESPNFLKEKFDFFKDKKFKIVYCIGEDLKTREKGLGAVKEFLNEQLENIDLDYQNLIVAYEPIWAIGTGKSASLEDIYLTHGFLKQHLNQKMPLLYGGSVNTQNAKEILGIDSVDGLLIGSTSLELENFKTIISFL MTKIAMANFKSAMPIFKSHAYLKELEKTLKPQHCDRVFVFPDFLGLLPNAFLHFTLGVQNAYPKDCGAFTGEITSKHLEELKINTLLIGHSERRVLLKESPNFLKEKFDFFKDKKFKIVYCIGEDLKTREKGLGAVKEFLNEQLENIDLDYQNLIVAYEPIWAIGTGKSASLEDIYLTHGFLKQHLNQKMPLLYGGSVNTQNAKEILGIDSVDGLLIGSTSLELENFKTIISFL 2 gi|1336928286|emb|LT900055.1| Helicobacter acinonychis isolate 212_9 genome assembly, chromosome: I LT900055 1550239 1 474.167 1219 1.37046e-150 1 234 325704 326405 0 3 232 232 0 234 MTKIAMANFKSAMPIFKSHAYLKELEKTLKPQHCDRVFVFPDFLGLLPNAFLHFTLGVQNAYPKDCGAFTGEITSKHLEELKINTLLIGHSERRVLLKESPNFLKEKFDFFKDKKFKIVYCIGEDLKTREKGLGAVKEFLNEQLENIDLDYQNLIVAYEPIWAIGTGKSASLEDIYLTHGFLKQHLNQKMPLLYGGSVNTQNAKEILGIDSVDGLLIGSTSLELENFKTIISFL MTKIAMANFKSAMPIFKSHAYLKELEKTLKPQHCDRVFVFPDFLGLLPNAFLHFTLGVQNAYPKDCGAFTGEITSKHLEELKINTLLIGHSERRALLKESPNFLKEKFDFFKDKKFKIVYCIGEDLKTREKGLGAVKEFLNEQLENIDLDYQNLIVAYEPIWAIGTGKSASLEDIYLTHGFLKQHLNQKMPLLYGGSVNTQNAKEILGIDSVDGLLIGSASLELENFKTIISFL MTKIAMANFKSAMPIFKSHAYLKELEKTLKPQHCDRVFVFPDFLGLLPNAFLHFTLGVQNAYPKDCGAFTGEITSKHLEELKINTLLIGHSERR LLKESPNFLKEKFDFFKDKKFKIVYCIGEDLKTREKGLGAVKEFLNEQLENIDLDYQNLIVAYEPIWAIGTGKSASLEDIYLTHGFLKQHLNQKMPLLYGGSVNTQNAKEILGIDSVDGLLIGS SLELENFKTIISFL 3 gi|1033012332|gb|CP011486.1| Helicobacter pylori strain K26A1, complete genome CP011486 1570310 1 452.981 1164 3.45778e-143 1 234 196043 196744 0 2 221 224 0 234 MTKIAMANFKSAMPIFKSHAYLKELEKTLKPQHCDRVFVFPDFLGLLPNAFLHFTLGVQNAYPKDCGAFTGEITSKHLEELKINTLLIGHSERRVLLKESPNFLKEKFDFFKDKKFKIVYCIGEDLKTREKGLGAVKEFLNEQLENIDLDYQNLIVAYEPIWAIGTGKSASLEDIYLTHGFLKQHLNQKMPLLYGGSVNTQNAKEILGIDSVDGLLIGSTSLELENFKTIISFL MTKIAMANFKSAMPIFKSHAYLKELEKTLKPQHCDRVFVFPDFLGLLPNAFLHFTLGAQNAYPKDCGAFTGEITSKHLEELKINTLLIGHSERRTLLKESPSFLKEKFDFFKDKNFKIIYCIGEDLKTREKGLAAVKEFLNEQLENIDLSYHNLIVAYEPIWAIGTKKSASLEDIYLTHGFLKQILNQKTPLLYGGSVNTQNAKEILGIDSVDGLLVGSASLELENFKTIISFL MTKIAMANFKSAMPIFKSHAYLKELEKTLKPQHCDRVFVFPDFLGLLPNAFLHFTLG QNAYPKDCGAFTGEITSKHLEELKINTLLIGHSERR LLKESP+FLKEKFDFFKDK FKI+YCIGEDLKTREKGL AVKEFLNEQLENIDL Y NLIVAYEPIWAIGT KSASLEDIYLTHGFLKQ LNQK PLLYGGSVNTQNAKEILGIDSVDGLL+GS SLELENFKTIISFL 4 gi|1559948212|dbj|AP017633.1| Helicobacter pylori DNA, complete genome, strain: PMSS1 AP017633 1603093 1 442.195 1136 2.08706e-139 1 234 1330168 1330869 0 -2 218 223 0 234 MTKIAMANFKSAMPIFKSHAYLKELEKTLKPQHCDRVFVFPDFLGLLPNAFLHFTLGVQNAYPKDCGAFTGEITSKHLEELKINTLLIGHSERRVLLKESPNFLKEKFDFFKDKKFKIVYCIGEDLKTREKGLGAVKEFLNEQLENIDLDYQNLIVAYEPIWAIGTGKSASLEDIYLTHGFLKQHLNQKMPLLYGGSVNTQNAKEILGIDSVDGLLIGSTSLELENFKTIISFL MTKIAMANFKSAMPIFKSHAYLKELEKTLKPQHFDRVFVFPDFLGLLPNSFLHFTLGVQNAYPRDCGAFTGEITSKHLEELKIHTLLIGHSERRVLLKESPSFLKEKFDFFKDKNFKIVYCIGEDLTTREKGFKAVKEFLNEQLENIDLNYSNLIVAYEPIWAIGTKKSASLEDIYLTHGFLKQILNQKTPLLYGGSVNTQNAKEILGIDSVDGLLIGSASWELENFKTIISFL MTKIAMANFKSAMPIFKSHAYLKELEKTLKPQH DRVFVFPDFLGLLPN+FLHFTLGVQNAYP+DCGAFTGEITSKHLEELKI+TLLIGHSERRVLLKESP+FLKEKFDFFKDK FKIVYCIGEDL TREKG AVKEFLNEQLENIDL+Y NLIVAYEPIWAIGT KSASLEDIYLTHGFLKQ LNQK PLLYGGSVNTQNAKEILGIDSVDGLLIGS S ELENFKTIISFL 5 gi|1143706535|gb|CP018823.1| Helicobacter pylori strain PMSS1 complete genome CP018823 1618480 1 442.195 1136 2.08707e-139 1 234 190464 191165 0 3 218 223 0 234 MTKIAMANFKSAMPIFKSHAYLKELEKTLKPQHCDRVFVFPDFLGLLPNAFLHFTLGVQNAYPKDCGAFTGEITSKHLEELKINTLLIGHSERRVLLKESPNFLKEKFDFFKDKKFKIVYCIGEDLKTREKGLGAVKEFLNEQLENIDLDYQNLIVAYEPIWAIGTGKSASLEDIYLTHGFLKQHLNQKMPLLYGGSVNTQNAKEILGIDSVDGLLIGSTSLELENFKTIISFL MTKIAMANFKSAMPIFKSHAYLKELEKTLKPQHFDRVFVFPDFLGLLPNSFLHFTLGVQNAYPRDCGAFTGEITSKHLEELKIHTLLIGHSERRVLLKESPSFLKEKFDFFKDKNFKIVYCIGEDLTTREKGFKAVKEFLNEQLENIDLNYSNLIVAYEPIWAIGTKKSASLEDIYLTHGFLKQILNQKTPLLYGGSVNTQNAKEILGIDSVDGLLIGSASWELENFKTIISFL MTKIAMANFKSAMPIFKSHAYLKELEKTLKPQH DRVFVFPDFLGLLPN+FLHFTLGVQNAYP+DCGAFTGEITSKHLEELKI+TLLIGHSERRVLLKESP+FLKEKFDFFKDK FKIVYCIGEDL TREKG AVKEFLNEQLENIDL+Y NLIVAYEPIWAIGT KSASLEDIYLTHGFLKQ LNQK PLLYGGSVNTQNAKEILGIDSVDGLLIGS S ELENFKTIISFL 6 gi|1149039824|gb|CP009259.1| Helicobacter pylori SS1, complete genome CP009259 1619098 1 442.195 1136 2.08707e-139 1 234 190465 191166 0 1 218 223 0 234 MTKIAMANFKSAMPIFKSHAYLKELEKTLKPQHCDRVFVFPDFLGLLPNAFLHFTLGVQNAYPKDCGAFTGEITSKHLEELKINTLLIGHSERRVLLKESPNFLKEKFDFFKDKKFKIVYCIGEDLKTREKGLGAVKEFLNEQLENIDLDYQNLIVAYEPIWAIGTGKSASLEDIYLTHGFLKQHLNQKMPLLYGGSVNTQNAKEILGIDSVDGLLIGSTSLELENFKTIISFL MTKIAMANFKSAMPIFKSHAYLKELEKTLKPQHFDRVFVFPDFLGLLPNSFLHFTLGVQNAYPRDCGAFTGEITSKHLEELKIHTLLIGHSERRVLLKESPSFLKEKFDFFKDKNFKIVYCIGEDLTTREKGFKAVKEFLNEQLENIDLNYSNLIVAYEPIWAIGTKKSASLEDIYLTHGFLKQILNQKTPLLYGGSVNTQNAKEILGIDSVDGLLIGSASWELENFKTIISFL MTKIAMANFKSAMPIFKSHAYLKELEKTLKPQH DRVFVFPDFLGLLPN+FLHFTLGVQNAYP+DCGAFTGEITSKHLEELKI+TLLIGHSERRVLLKESP+FLKEKFDFFKDK FKIVYCIGEDL TREKG AVKEFLNEQLENIDL+Y NLIVAYEPIWAIGT KSASLEDIYLTHGFLKQ LNQK PLLYGGSVNTQNAKEILGIDSVDGLLIGS S ELENFKTIISFL 7 gi|1560269298|gb|CP035106.1| Helicobacter pylori strain Hpbs3 chromosome, complete genome CP035106 1514674 1 441.039 1133 5.81854e-139 1 234 1231590 1232291 0 -3 215 224 0 234 MTKIAMANFKSAMPIFKSHAYLKELEKTLKPQHCDRVFVFPDFLGLLPNAFLHFTLGVQNAYPKDCGAFTGEITSKHLEELKINTLLIGHSERRVLLKESPNFLKEKFDFFKDKKFKIVYCIGEDLKTREKGLGAVKEFLNEQLENIDLDYQNLIVAYEPIWAIGTGKSASLEDIYLTHGFLKQHLNQKMPLLYGGSVNTQNAKEILGIDSVDGLLIGSTSLELENFKTIISFL MTKIAMANFKSAMPIFKSHAYLEELEKTLKPQHSDRVFVFPDFLGLLPNSFLHFTLGVQNAYPRDCGAFTGEITSQHLEELKINTLLIGHSERRLLLKESPSFLKEKFDFFKSKNFKIVYCIGEELTTREKGFKAVKEFLNEQLENIDLNYPNLVVAYEPIWAIGTKKSASLEDIYLTHGFLKQVLNQKTPLLYGGSVNTQNAKEILGIDSVDGLLIGSTSLELENFKTIISFL MTKIAMANFKSAMPIFKSHAYL+ELEKTLKPQH DRVFVFPDFLGLLPN+FLHFTLGVQNAYP+DCGAFTGEITS+HLEELKINTLLIGHSERR+LLKESP+FLKEKFDFFK K FKIVYCIGE+L TREKG AVKEFLNEQLENIDL+Y NL+VAYEPIWAIGT KSASLEDIYLTHGFLKQ LNQK PLLYGGSVNTQNAKEILGIDSVDGLLIGSTSLELENFKTIISFL 8 gi|1540258434|emb|LR134517.1| Helicobacter pylori strain NCTC13345 genome assembly, chromosome: 1 LR134517 1644315 1 440.269 1131 9.62198e-139 1 234 363062 363763 0 2 216 222 0 234 MTKIAMANFKSAMPIFKSHAYLKELEKTLKPQHCDRVFVFPDFLGLLPNAFLHFTLGVQNAYPKDCGAFTGEITSKHLEELKINTLLIGHSERRVLLKESPNFLKEKFDFFKDKKFKIVYCIGEDLKTREKGLGAVKEFLNEQLENIDLDYQNLIVAYEPIWAIGTGKSASLEDIYLTHGFLKQHLNQKMPLLYGGSVNTQNAKEILGIDSVDGLLIGSTSLELENFKTIISFL MTKIAMANFKSAMPIFKSHAYLKELEKTLKPQHFDRVFVFPDFLGLLPNAFLHFTLGAQNAYPRDCGAFTGEITSKHLEELKIHTLLIGHSERRALLKESPSFLKEKFDFFKDKNFKIVYCVGEDLTTREKGFRAVKEFLSEQLENIDLNYSNLIVAYEPIWAIGTKKSASLEDIYLTHGFLKQILNQKTPLLYGGSVNTQNAKEILGIDSVDGLLIGSASLELENFKTIISFL MTKIAMANFKSAMPIFKSHAYLKELEKTLKPQH DRVFVFPDFLGLLPNAFLHFTLG QNAYP+DCGAFTGEITSKHLEELKI+TLLIGHSERR LLKESP+FLKEKFDFFKDK FKIVYC+GEDL TREKG AVKEFL+EQLENIDL+Y NLIVAYEPIWAIGT KSASLEDIYLTHGFLKQ LNQK PLLYGGSVNTQNAKEILGIDSVDGLLIGS SLELENFKTIISFL 9 gi|1033005233|gb|CP011487.1| Helicobacter pylori strain PNG84A, complete genome CP011487 1531450 1 439.499 1129 2.21067e-138 1 234 161806 162507 0 1 215 221 0 234 MTKIAMANFKSAMPIFKSHAYLKELEKTLKPQHCDRVFVFPDFLGLLPNAFLHFTLGVQNAYPKDCGAFTGEITSKHLEELKINTLLIGHSERRVLLKESPNFLKEKFDFFKDKKFKIVYCIGEDLKTREKGLGAVKEFLNEQLENIDLDYQNLIVAYEPIWAIGTGKSASLEDIYLTHGFLKQHLNQKMPLLYGGSVNTQNAKEILGIDSVDGLLIGSTSLELENFKTIISFL MTKIAMANFKSAMPIFKSHAYLKELEKTLKPQHFDRVFVFPDFLGLLPNAFLHFTLGVQNAYPRDCGAFTGEITSKHLEELKINTLLIGHSERRMLLKESPSFLKEKFDFFKSKNFKIIYCIGEELTTREKSFKAVKEFLNEQLENIDLDYPNLVVAYEPIWAIGAKKSASLEDIYLTHGFLKQILNQKTPLLYGGSVNTQNAKEILGIDSVDGLLIGSASLELENFKTIISFL MTKIAMANFKSAMPIFKSHAYLKELEKTLKPQH DRVFVFPDFLGLLPNAFLHFTLGVQNAYP+DCGAFTGEITSKHLEELKINTLLIGHSERR+LLKESP+FLKEKFDFFK K FKI+YCIGE+L TREK AVKEFLNEQLENIDLDY NL+VAYEPIWAIG KSASLEDIYLTHGFLKQ LNQK PLLYGGSVNTQNAKEILGIDSVDGLLIGS SLELENFKTIISFL 10 gi|1509197163|gb|CP025748.1| Helicobacter pylori strain Hp_TH2099 chromosome CP025748 1667396 1 439.113 1128 2.2539e-138 1 234 200718 201419 0 3 216 220 0 234 MTKIAMANFKSAMPIFKSHAYLKELEKTLKPQHCDRVFVFPDFLGLLPNAFLHFTLGVQNAYPKDCGAFTGEITSKHLEELKINTLLIGHSERRVLLKESPNFLKEKFDFFKDKKFKIVYCIGEDLKTREKGLGAVKEFLNEQLENIDLDYQNLIVAYEPIWAIGTGKSASLEDIYLTHGFLKQHLNQKMPLLYGGSVNTQNAKEILGIDSVDGLLIGSTSLELENFKTIISFL MTKIAMANFKSAMPIFKSHAYLKELEKTLKPQHFDRVFVFPDFLGLLPNSFLHFTLGAQNAYPKDCGAFTGEITSKHLEELKINTLLIGHSERRALLKESPNFLKEKFDFFKSKNFKIVYCIGEELTTREKGFKAVKEFLNEQLENIDLNYPNLVVAYEPIWAIGTKKSASLEDIYLTHGFLKQILNQKTPLLYGGSVNVQNAKEILGIDSVDGLLIGSASLELENFKTIISFL MTKIAMANFKSAMPIFKSHAYLKELEKTLKPQH DRVFVFPDFLGLLPN+FLHFTLG QNAYPKDCGAFTGEITSKHLEELKINTLLIGHSERR LLKESPNFLKEKFDFFK K FKIVYCIGE+L TREKG AVKEFLNEQLENIDL+Y NL+VAYEPIWAIGT KSASLEDIYLTHGFLKQ LNQK PLLYGGSVN QNAKEILGIDSVDGLLIGS SLELENFKTIISFL 51302476 204305995260 0 0 0.041 0.267 0.14