blastn BLASTN 2.2.26+ Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. db/minirefseq_mrna Query_1 hg19_dna range=chr1:1207307-1207372 5'pad=0 3'pad=0 strand=+ repeatMasking=none 66 10 1 -2 0 0 L;m; 1 Query_1 hg19_dna range=chr1:1207307-1207372 5'pad=0 3'pad=0 strand=+ repeatMasking=none 66 1 gnl|BL_ORD_ID|6 gi|94721341|ref|NM_001040441.1| Homo sapiens zinc finger and BTB domain containing 8A (ZBTB8A), mRNA 6 7333 1 115.613 62 5.52066e-29 5 66 3677 3738 1 1 62 62 0 62 GCCATTGCACTCCAGCCTGGGCAACAAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAA GCCATTGCACTCCAGCCTGGGCAACAAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAA |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 2 98.9927 53 5.55986e-24 6 58 2824 2876 1 1 53 53 0 53 CCATTGCACTCCAGCCTGGGCAACAAGAGCGAAACTCCGTCTCAAAAAAAAAA CCATTGCACTCCAGCCTGGGCAACAAGAGCGAAACTCCGTCTCAAAAAAAAAA ||||||||||||||||||||||||||||||||||||||||||||||||||||| 2 gnl|BL_ORD_ID|5 gi|332237160|ref|XM_003267724.1| PREDICTED: Nomascus leucogenys ATG14 autophagy related 14 homolog (S. cerevisiae) (ATG14), mRNA 5 4771 1 115.613 62 5.52066e-29 5 66 2865 2926 1 1 62 62 0 62 GCCATTGCACTCCAGCCTGGGCAACAAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAA GCCATTGCACTCCAGCCTGGGCAACAAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAA |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 3 gnl|BL_ORD_ID|9 gi|332254616|ref|XM_003276378.1| PREDICTED: Nomascus leucogenys S100P binding protein, transcript variant 2 (S100PBP), mRNA 9 4345 1 111.919 60 7.14143e-28 1 66 2857 2792 1 -1 64 64 0 66 TCAAGCCATTGCACTCCAGCCTGGGCAACAAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAA TCATGCCACTGCACTCCAGCCTGGGCAACAAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAA ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 4 gnl|BL_ORD_ID|8 gi|332865370|ref|XM_527768.3| PREDICTED: Pan troglodytes zinc finger protein 273, transcript variant 2 (ZNF273), mRNA 8 4335 1 111.919 60 7.14143e-28 1 66 2705 2640 1 -1 64 64 0 66 TCAAGCCATTGCACTCCAGCCTGGGCAACAAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAA TCACGCCATTGCACTCCAGCCTGGGCAACAAGAGTGAAACTCCGTCTCAAAAAAAAAAAAAAAAAA ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| 5 gnl|BL_ORD_ID|7 gi|332865372|ref|XM_003318468.1| PREDICTED: Pan troglodytes zinc finger protein 273, transcript variant 1 (ZNF273), mRNA 7 4430 1 111.919 60 7.14143e-28 1 66 2800 2735 1 -1 64 64 0 66 TCAAGCCATTGCACTCCAGCCTGGGCAACAAGAGCGAAACTCCGTCTCAAAAAAAAAAAAAAAAAA TCACGCCATTGCACTCCAGCCTGGGCAACAAGAGTGAAACTCCGTCTCAAAAAAAAAAAAAAAAAA ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| 23 67750 14 3506256 0.46 1.28 0.85