ó
î§øHc           @   s¦   i  Z  d  d d „  ƒ  YZ d e f d „  ƒ  YZ e e  d <d e f d „  ƒ  YZ e e  d <d e f d	 „  ƒ  YZ e e  d
 <d e f d „  ƒ  YZ e e  d <d „  Z d S(   t   Generic_dbutilsc           B   s/   e  Z d  „  Z d „  Z d „  Z d d „ Z RS(   c         C   s   d  S(   N(    (   t   self(    (    s   /oak/stanford/groups/akundaje/marinovg/programs/biopython-1.50.tar.gz/biopython-1.50/build/lib.linux-x86_64-2.7/BioSQL/DBUtils.pyt   __init__   s    c         C   s   | d k r | Sd Sd  S(   Nt   biosequencet   bioentry(    (   R   t   table(    (    s   /oak/stanford/groups/akundaje/marinovg/programs/biopython-1.50.tar.gz/biopython-1.50/build/lib.linux-x86_64-2.7/BioSQL/DBUtils.pyt   tname   s     c         C   s@   |  j  | ƒ } d | | f } | j | ƒ | j ƒ  } | d S(   Ns   select max(%s_id) from %si    (   R   t   executet   fetchone(   R   t   cursorR   t   sqlt   rv(    (    s   /oak/stanford/groups/akundaje/marinovg/programs/biopython-1.50.tar.gz/biopython-1.50/build/lib.linux-x86_64-2.7/BioSQL/DBUtils.pyt   last_id   s
    i   c         C   s   d  S(   N(    (   R   t   connt   y(    (    s   /oak/stanford/groups/akundaje/marinovg/programs/biopython-1.50.tar.gz/biopython-1.50/build/lib.linux-x86_64-2.7/BioSQL/DBUtils.pyt
   autocommit%   s    (   t   __name__t
   __module__R   R   R   R   (    (    (    s   /oak/stanford/groups/akundaje/marinovg/programs/biopython-1.50.tar.gz/biopython-1.50/build/lib.linux-x86_64-2.7/BioSQL/DBUtils.pyR       s   			t   Mysql_dbutilsc           B   s   e  Z d  „  Z RS(   c         C   s*   y | j  ƒ  SWn t k
 r% | j SXd  S(   N(   t	   insert_idt   AttributeErrort	   lastrowid(   R   R	   R   (    (    s   /oak/stanford/groups/akundaje/marinovg/programs/biopython-1.50.tar.gz/biopython-1.50/build/lib.linux-x86_64-2.7/BioSQL/DBUtils.pyR   *   s    (   R   R   R   (    (    (    s   /oak/stanford/groups/akundaje/marinovg/programs/biopython-1.50.tar.gz/biopython-1.50/build/lib.linux-x86_64-2.7/BioSQL/DBUtils.pyR   )   s   t   MySQLdbt   Psycopg_dbutilsc           B   s&   e  Z d  „  Z d „  Z e d „ Z RS(   c         C   s:   |  j  | ƒ } d | } | j | ƒ | j ƒ  } | d S(   Ns   select nextval('%s_pk_seq')i    (   R   R   R   (   R   R	   R   R
   R   (    (    s   /oak/stanford/groups/akundaje/marinovg/programs/biopython-1.50.tar.gz/biopython-1.50/build/lib.linux-x86_64-2.7/BioSQL/DBUtils.pyt   next_id7   s
    
c         C   s:   |  j  | ƒ } d | } | j | ƒ | j ƒ  } | d S(   Ns   select currval('%s_pk_seq')i    (   R   R   R   (   R   R	   R   R
   R   (    (    s   /oak/stanford/groups/akundaje/marinovg/programs/biopython-1.50.tar.gz/biopython-1.50/build/lib.linux-x86_64-2.7/BioSQL/DBUtils.pyR   >   s
    
c         C   s   | j  | ƒ d  S(   N(   R   (   R   R   R   (    (    s   /oak/stanford/groups/akundaje/marinovg/programs/biopython-1.50.tar.gz/biopython-1.50/build/lib.linux-x86_64-2.7/BioSQL/DBUtils.pyR   E   s    (   R   R   R   R   t   TrueR   (    (    (    s   /oak/stanford/groups/akundaje/marinovg/programs/biopython-1.50.tar.gz/biopython-1.50/build/lib.linux-x86_64-2.7/BioSQL/DBUtils.pyR   6   s   		t   psycopgt   Psycopg2_dbutilsc           B   s   e  Z e d  „ Z RS(   c         C   s'   | r | j  d ƒ n | j  d ƒ d  S(   Ni    i   (   t   set_isolation_level(   R   R   R   (    (    s   /oak/stanford/groups/akundaje/marinovg/programs/biopython-1.50.tar.gz/biopython-1.50/build/lib.linux-x86_64-2.7/BioSQL/DBUtils.pyR   K   s    (   R   R   R   R   (    (    (    s   /oak/stanford/groups/akundaje/marinovg/programs/biopython-1.50.tar.gz/biopython-1.50/build/lib.linux-x86_64-2.7/BioSQL/DBUtils.pyR   J   s   t   psycopg2t   Pgdb_dbutilsc           B   s,   e  Z d  Z d „  Z d „  Z e d „ Z RS(   sH   Add support for pgdb in the PyGreSQL database connectivity package.
    c         C   s:   |  j  | ƒ } d | } | j | ƒ | j ƒ  } | d S(   Ns   select nextval('%s_pk_seq')i    (   R   R   R   (   R   R	   R   R
   R   (    (    s   /oak/stanford/groups/akundaje/marinovg/programs/biopython-1.50.tar.gz/biopython-1.50/build/lib.linux-x86_64-2.7/BioSQL/DBUtils.pyR   V   s
    
c         C   s:   |  j  | ƒ } d | } | j | ƒ | j ƒ  } | d S(   Ns   select currval('%s_pk_seq')i    (   R   R   R   (   R   R	   R   R
   R   (    (    s   /oak/stanford/groups/akundaje/marinovg/programs/biopython-1.50.tar.gz/biopython-1.50/build/lib.linux-x86_64-2.7/BioSQL/DBUtils.pyR   ]   s
    
c         C   s   t  d ƒ ‚ d  S(   Ns   pgdb does not support this!(   t   NotImplementedError(   R   R   R   (    (    s   /oak/stanford/groups/akundaje/marinovg/programs/biopython-1.50.tar.gz/biopython-1.50/build/lib.linux-x86_64-2.7/BioSQL/DBUtils.pyR   d   s    (   R   R   t   __doc__R   R   R   R   (    (    (    s   /oak/stanford/groups/akundaje/marinovg/programs/biopython-1.50.tar.gz/biopython-1.50/build/lib.linux-x86_64-2.7/BioSQL/DBUtils.pyR   S   s   		t   pgdbc         C   s!   y t  |  ƒ  SWn t ƒ  SXd  S(   N(   t   _dbutilsR    (   t   module_name(    (    s   /oak/stanford/groups/akundaje/marinovg/programs/biopython-1.50.tar.gz/biopython-1.50/build/lib.linux-x86_64-2.7/BioSQL/DBUtils.pyt   get_dbutilsi   s    N(    (   R"   R    R   R   R   R   R$   (    (    (    s   /oak/stanford/groups/akundaje/marinovg/programs/biopython-1.50.tar.gz/biopython-1.50/build/lib.linux-x86_64-2.7/BioSQL/DBUtils.pyt   <module>
   s   



