<!-- ?xml version="1.0"? -->
<!-- DOCTYPE TaxaSet PUBLIC "-//NLM//DTD TaxaSet, 20 February 2004//EN" "taxon.dtd" -->

<!-- $Id: taxon.dtd,v 1.1 2008/05/17 06:10:25 mdehoon Exp $ -->

<!-- ELEMENTS -->
<!ELEMENT TaxId       (#PCDATA)>
<!ELEMENT ParentTaxId (#PCDATA)>
<!ELEMENT Division    (#PCDATA)>
<!ELEMENT Rank        (#PCDATA)>
<!ELEMENT ClassCDE    (#PCDATA)>
<!ELEMENT DispName    (#PCDATA)>
<!ELEMENT UniqueName  (#PCDATA)>
<!ELEMENT GCId        (#PCDATA)>
<!ELEMENT GCName      (#PCDATA)>
<!ELEMENT MGCId       (#PCDATA)>
<!ELEMENT MGCName     (#PCDATA)>
<!ELEMENT Lineage     (#PCDATA)>
<!ELEMENT PropName    (#PCDATA)>
<!ELEMENT CreateDate  (#PCDATA)>
<!ELEMENT UpdateDate  (#PCDATA)>
<!ELEMENT PubDate     (#PCDATA)>
<!ELEMENT CitId       (#PCDATA)>
<!ELEMENT CitKey      (#PCDATA)>
<!ELEMENT CitUrl      (#PCDATA)>
<!ELEMENT CitText     (#PCDATA)>
<!ELEMENT CitPubmedId (#PCDATA)>
<!ELEMENT CitMedlineId (#PCDATA)>
<!ELEMENT ModId       (#PCDATA)>
<!ELEMENT ModType     (#PCDATA)>
<!ELEMENT ModName     (#PCDATA)>
<!ELEMENT ModGBhidden (#PCDATA)>
<!ELEMENT RModId      (#PCDATA)>
<!ELEMENT RTaxId      (#PCDATA)>
<!ELEMENT ScientificName (#PCDATA)>
<!ELEMENT GenbankCommonName (#PCDATA)>
<!ELEMENT GenbankAcronym (#PCDATA)>
<!ELEMENT BlastName   (#PCDATA)>
<!ELEMENT EquivalentName   (#PCDATA)>
<!ELEMENT Synonym     (#PCDATA)>
<!ELEMENT Acronym     (#PCDATA)>
<!ELEMENT Misspelling (#PCDATA)>
<!ELEMENT Anamorph    (#PCDATA)>
<!ELEMENT Includes    (#PCDATA)>
<!ELEMENT CommonName  (#PCDATA)>
<!ELEMENT Inpart      (#PCDATA)>
<!ELEMENT Misnomer    (#PCDATA)>
<!ELEMENT Teleomorph  (#PCDATA)>
<!ELEMENT GenbankSynonym  (#PCDATA)>
<!ELEMENT GenbankAnamorph (#PCDATA)>
<!ELEMENT PropValueInt (#PCDATA)>
<!ELEMENT PropValueBool (#PCDATA)>
<!ELEMENT PropValueString (#PCDATA)>

<!-- Taxon structural entities -->
<!ELEMENT TaxaSet ( Taxon+ )>

<!ELEMENT Taxon (
                 TaxId,
                 ScientificName,
                 OtherNames?, 
                 ParentTaxId?,
                 Rank?, 
                 Division?,
                 GeneticCode?,
                 MitoGeneticCode?,
                 Lineage?,
                 LineageEx?,
                 Citations?,
                 Modifiers?,
                 Properties?,
                 CreateDate?,
                 UpdateDate?,
                 PubDate?,
                 AkaTaxIds?
                )>


<!ELEMENT OtherNames	( GenbankCommonName?,
                          GenbankAcronym?,
                          BlastName?,
                          ( EquivalentName |
	                    Synonym        |
	                    Acronym        |
                            Misspelling    |
	                    Anamorph       |
	                    Includes       |
	                    CommonName     |
	                    Inpart         |
	                    Misnomer       |
	                    Teleomorph     |
	                    GenbankSynonym |
	                    GenbankAnamorph
                          )*,
                          Name*
                        )>

<!ELEMENT Name ( ClassCDE, DispName, UniqueName? )>

<!ELEMENT GeneticCode ( GCId, GCName )>

<!ELEMENT MitoGeneticCode ( MGCId, MGCName )>

<!ELEMENT Citations ( Citation+ )>

<!ELEMENT Citation ( CitId,
                     CitKey,
                     CitUrl?,
                     CitText?,
                     CitPubmedId?,
                     CitMedlineId?
                   )>

<!ELEMENT Modifiers ( Modifier+ )>

<!ELEMENT Modifier ( ModId,
                     ModType,
                     ModName,
                     ModGBhidden,
                     ( RModId | RTaxId )?
                   )>

<!ELEMENT Properties ( Property+ )>

<!ELEMENT Property ( PropName, ( PropValueInt |
                                 PropValueBool |
                                 PropValueString ) )>

<!ELEMENT AkaTaxIds ( TaxId* )>

<!ELEMENT LineageEx ( Taxon* )>