ó
°?c           @   sÅ   d  d l  m Z d  d l m Z d  d l Z d  d l Z e j   Z e j j	 d  rf e j
 d  n1 e j j	 d  r e j
 d  n d GHe j   d GHe j   d d	 GHd
 e j d  GHd S(   iÿÿÿÿ(   t   Fasta(   t
   CodonUsageNs%   ./CodonUsage/HighlyExpressedGenes.txts+   ./Tests/CodonUsage/HighlyExpressedGenes.txtse   Cannot find the file HighlyExpressedGene.txt
Make sure you run the tests from within the Tests folders   The current index used:t   -i<   s*   codon adaptation index for test gene: %.2ftB   ATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGA(   t   BioR    t   Bio.SeqUtilsR   t   ost   syst   CodonAdaptationIndext   Xt   patht   existst   generate_indext   exitt   print_indext   cai_for_gene(    (    (    s   test_CodonUsage.pyt   <module>   s   

	