3. GS Amplicon Variant Analyzer Command Line Interface
: 3.3 AVA-CLI General Online Help
3.3
AVA-CLI General Online Help
3.3.1 Help
3.3.2 General Help
This section provides the verbatim content of the general online help files for the AVA-CLI. To enter the upper level of the help files, run the CLI “help” command. Information to access help on more detailed topics is as indicated below. The online help file content for each individual command, providing the full command usage statement, is provided in section
3.4
. A more gentle introduction to the commands, with a full example script for setting up and performing computations on a Project, is given in section
3.5
, and a smaller Project script displaying MID features is given in section
3.6
.