Viewing Assembly Output with the Result Files Tab

1.9	Viewing Assembly Output with the Result Files Tab

The Result Files tab allows you to view the various metrics files generated by the GS De Novo Assembly software (described in detail in Section 1.15.1). Using the list in the left-hand panel of the tab, click on the name of the output file you want to examine; its content will be displayed on the right-hand panel of the tab (Figure 18).

For very long files, such as the sequences of all contigs of a large assembled genome, this view displays the file truncated to 50,000 lines. When this occurs, a note to that effect specifies that it is so both at the beginning and at the end of the display. The file itself remains intact, however.

Figure 18: gsAssembler Result Files tab for Genomic projects

Figure 18 above shows the Result Files tab for a Genomic Assembly project. The result files for a cDNA project are listed below (Figure 19). The result file contents are described in detail in Section 1.15.1.

Figure 19: gsAssembler Results Files tab for cDNA projects