2. GS Reporter
:
2.2 GS Reporter output
: 2.2.2 GS Reporter FNA and QUAL Files
2.2.2
GS Reporter FNA and QUAL Files
The GS Reporter application also generates FASTA files (*.fna) and associated base quality files (*.qual) for the high quality reads generated. These are described below.
Output
Description
region.librarykey.454Reads.fna
The (trimmed) nucleotide sequences for the filtered reads of that region and key.
region.librarykey.454Reads.qual
This file contains the nucleotide quality scores (Phred-equivalent) for the high quality (filtered and trimmed) reads of that region and key. For a description of the process to compute individual base quality scores, see appendix Section
6.6
.
