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1. Overview of the 454 Sequencing System Software : 1.3 Data Output and Folder Structure : 1.3.1 Data Acquisition (GS Sequencer and GS Junior Sequencer) Results: the Run Folder
The organization of a generic Run folder (‘R_’) is depicted in Figure 2. All the raw data (raw images, log files, etc.) remain in temporary local storage on the GS FLX+ Instrument or the GS Junior Attendant PC in case the user chooses to re-analyze them (e.g. using the reanalysis function of the GS Run Browser; see Part B, Section 3 of this manual). In addition, if “Backup” is selected during Run set up, raw and processed data files from the Run can be transferred to a network location specified by the System Administrator, for long-term storage.
   R_yyyy_mm_dd_hh_min_sec_machineName_userName_uniqueRunName/
dataRunParams.parse
imageLog.parse
PTP_flowOrder_cycleCount.icl
runlog.parse
rawImages/
00001.png
00002.png
00003.png