ó
2zÉ[c           @  sŒ   d  d l  m Z d  d l m Z d  d l Z d  d l Z d  d l Z d  d l Z d  d l Z d e j	 f d „  ƒ  YZ
 d d d „  ƒ  YZ d S(	   iÿÿÿÿ(   t   print_function(   t   globNt
   FuncThreadc           B  s   e  Z d  „  Z d „  Z RS(   c         G  s&   t  j j |  ƒ | |  _ | |  _ d  S(   N(   t	   threadingt   Threadt   __init__t   _targett   _args(   t   selft   targett   args(    (    s   MulticoreTSNE/__init__.pyR      s    	c         C  s   |  j  |  j Œ  d  S(   N(   R   R   (   R   (    (    s   MulticoreTSNE/__init__.pyt   run   s    (   t   __name__t
   __module__R   R   (    (    (    s   MulticoreTSNE/__init__.pyR      s   	t   MulticoreTSNEc           B  s\   e  Z d  Z d d d d d d d d d	 d
 d d d d e d „ Z d d „ Z d d „ Z RS(   s  
    Compute t-SNE embedding using Barnes-Hut optimization and
    multiple cores (if avaialble).

    Parameters mostly correspond to parameters of `sklearn.manifold.TSNE`.

    The following parameters are unused:
    * n_iter_without_progress
    * min_grad_norm
    * metric
    * method
    
    When `cheat_metric` is true squared equclidean distance is used to build VPTree. 
    Usually leads to same quality, yet much faster.

    Parameter `init` doesn't support 'pca' initialization, but a precomputed
    array can be passed.
    i   g      >@i   iÈ   iè  i   gH¯¼šò×z>t	   euclideant   randomi    t
   barnes_hutg      à?i   c         C  së  | |  _  | |  _ | |  _ | |  _ | |  _ | |  _ | |  _ | d  k rQ d n | |  _ |	 |  _	 d  |  _
 d  |  _ d  |  _ t |
 ƒ |  _ | |  _ t |	 t j ƒ sÀ |	 d k sÀ t d ƒ ‚ t |	 t j ƒ r$|	 j d k sí t d ƒ ‚ |	 j d | k st d ƒ ‚ t j |	 t ƒ |  _	 n  t j ƒ  |  _ |  j j d ƒ t j j t j j t  ƒ ƒ } y` t! t j j" | d	 ƒ ƒ t! t j j" | d
 ƒ ƒ d } |  j j# t j j" | | ƒ ƒ |  _$ Wn# t% t& f k
 ræt' d ƒ ‚ n Xd  S(   NiÿÿÿÿR   s   init must be 'random' or arrayi   s   init array must be 2Di   s7   init array must be of shape (n_instances, n_components)s¿  void tsne_run_double(double* X, int N, int D, double* Y,
                                    int no_dims, double perplexity, double theta,
                                    int num_threads, int max_iter, int random_state,
                                    bool init_from_Y, int verbose,
                                    double early_exaggeration, double learning_rate,
                                    double *final_error, int distance);s   libtsne*.sos
   *tsne*.dlli    s.   Cannot find/open tsne_multicore shared library((   t   n_componentst   anglet
   perplexityt   early_exaggerationt   learning_ratet   n_itert   n_jobst   Nonet   random_statet   initt
   embedding_t   n_iter_t   kl_divergence_t   intt   verboset   cheat_metrict
   isinstancet   npt   ndarrayt   AssertionErrort   ndimt   shapet   ascontiguousarrayt   floatt   cffit   FFIt   ffit   cdeft   ost   patht   dirnamet   realpatht   __file__R   t   joint   dlopent   Ct
   IndexErrort   OSErrort   RuntimeError(   R   R   R   R   R   R   t   n_iter_without_progresst   min_grad_normt   metricR   R    R   t   methodR   R   R!   R/   t   sofile(    (    s   MulticoreTSNE/__init__.pyR   ,   s:    												*	 (c         C  s   |  j  | | ƒ |  S(   N(   t   fit_transform(   R   t   Xt   y(    (    s   MulticoreTSNE/__init__.pyt   fita   s    c         C  sê  | j  d k s t d ƒ ‚ t j | d t d d d t ƒ} | j \ } } t |  j t j	 ƒ } | r¡ |  j j
 d ƒ } | j d | j d k s¹ t d ƒ ‚ n t j | |  j f ƒ } |  j j d	 | j j ƒ } |  j j d	 | j j ƒ } t j d d t ƒ}	 |  j j d	 |	 j j ƒ }
 t |  j j | | | | |  j |  j |  j |  j |  j |  j | |  j |  j |  j |
 t |  j ƒ ƒ } t | _ | j ƒ  x- | j  ƒ  rÇ| j! d
 d ƒ t" j# j$ ƒ  q›W| |  _% |	 |  _& |  j |  _' | S(   Ni   s   X should be 2D array.t   dtypet   orderR5   t   copyi    s*   n_instances in init array and X must matchs   double*t   timeoutg      ð?((   R&   R%   R#   t   arrayR)   t   TrueR'   R"   R   R$   RD   t   zerosR   R,   t   castt   ctypest   dataR   R5   t   tsne_run_doubleR   R   R   R   R   R    R   R   R   R!   t   daemont   startt   is_aliveR3   t   syst   stdoutt   flushR   R   R   (   R   R?   t   _yt   Nt   Dt   init_from_Yt   Yt   cffi_Xt   cffi_Yt   final_errort   cffi_final_errort   t(    (    s   MulticoreTSNE/__init__.pyR>   e   s6    !)			
		N(   R   R   t   __doc__R   RG   R   RA   R>   (    (    (    s   MulticoreTSNE/__init__.pyR      s$   &(    (   t
   __future__R    R   R   R.   RP   t   numpyR#   R*   R   R   R   (    (    (    s   MulticoreTSNE/__init__.pyt   <module>   s   
