Welcome to CHANCE (CHiP-seq ANalytics and Confidence Estimation)!
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Download the pdf [manual](/songlab/chance/raw/master/CHANCE-Manual.pdf) or browse it [online](/songlab/chance/wiki/CHANCE-Manual).
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Download binary executables and sample data from [github](https://github.com/songlab/chance/downloads) or from the [Song lab](http://songlab.ucsf.edu/CHANCE.html).
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Join the [google user's group](https://groups.google.com/forum/#!forum/chance-users-group)!
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Updates:
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11/30/12-TAIR10 support is in beta, note that ENCODE doesn't have Aribidopsis data atm so functionionality requiring ENCODE is disabled.