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IMLT$HD$ML$AIIIAIIIAOTHCIwPMO(MG C0L$0HPL$xHt$pAH$8H$|$hEWD$XL\$PHL$HHt$@DT$`Ld$8Ll$0Hl$(A|$ EWDT$M_@L\$IO8HL$Iw0H$@H4$H8LIH$Hc$IG4$ IG{At{uHk} L{C0E_TMO0MG(IO IRIrD\$0AGD$(A|$ E_D\$AGD$I@H|$M_8L$I:HAGPIG{AOTIwPMO(MG IRHt$pL$0L$xAGH$8H$D$hAD$XL\$PHL$HHt$@|$`Ld$8Ll$0Hl$(AGD$ A|$M_@L\$IO8HL$Iw0H$@H4$I:LHIGAGTIPMO8MG0IO(IW H|$HD$PE_D\$@AwD$0Ld$(Ll$ Hl$t$8AGLD$A|$M_@L$I:HIGQMIEAAIL$H$I HD$xE8D\$pEGTDD$hAOL$`AGD$XE_D\$PM0LD$HI(HL$@IGHHD$8M_@L\$0MG8LD$(IO0HL$ IG(IHD$M_ L\$EH $DD$I MHIG^Ar$H$MO(MG IRM_PH$ATL\$pH$0L$|$xAOH$8L$hAwD$XHD$PH|$HL\$@t$`Ld$8Ll$0Hl$(D$ AOL$Iw@H$@Ht$IG8LHD$I0H<$I:H$IGIMO@MG8IO0IW(Iw H|$hIHD$`MH$L\$XIL$HD$HL\$@H|$PA|$8IHD$0E_XD\$(AT|$ AGD$E_D\$A|$IGHH$I:HIGH{Atf.{uLKMt A9L{C%MMO@H$MG8IO0IW(Iw L\$HIxHD$8H|$@E_pD\$0IhH|$(AGTD$ E_D\$A|$AGD$M_HL$I:HIG)EMOHMG8IO(IW AwADT$8IHD$0MIL\$(EHD$DT$ MMLT$L\$IH$AIIIAIIIAOTL[IwPMO(MG C0H$0ISL$xHt$pAH$8H$|$hEWD$XHD$PHL$HHt$@DT$`Ld$8Ll$0Hl$(A|$ EWDT$IG@HD$IO8HL$Iw0H$@H4$I;LIH$Hc$IG$ QL$MO(MG IRIGPL$ATHD$pL$0H$|$xAOH$8L$hAwD$XL\$PH|$HHD$@t$`Ld$8Ll$0Hl$(D$ AOL$Iw@H$@Ht$M_8LL\$I0H<$I:H$IGAGTMO0MG(IO IRIrD$0E_D\$(A|$ AGD$E_D\$I@H|$IG8H$I:HAGPIGUAOTIwPMO(MG IRHt$pH$0L$xE_H$8H$D\$hAD$XHD$PHL$HHt$@|$`Ld$8Ll$0Hl$(E_D\$ A|$IG@HD$IO8HL$Iw0H$@H4$I:LHIGE_TIPMO8MG0IO(IW H|$HD\$PAGD$@AwD$0Ld$(Ll$ Hl$t$8E_LD\$A|$IG@H$I:HIG(MIEAAIL$H$M L\$xA8D$pEGTDD$hAOL$`E_D\$XAGD$PM0LD$HI(HL$@M_HL\$8IG@HD$0MG8LD$(IO0HL$ M_(IL\$IG HD$EH $DD$I MHIG6IG{A{uLcE$ML$HI$MD$8IL$(IT$ At$A|$Dl$8M$M$Lt$0M$LT$(E$HD$D\$ I$Ll$Hl$M$L4$A$I$I$I$A$I$I$I$C0H 0f.SHH HtKH?HtfLC8LK0HC@HKHSHsLD$L $LC LK(HD$HH 1[H H fHt#HGHt t@GARH /HSHuD{u[H 5fHt+HGHt8ut GASH ,ff.HSHuUDt6CuHC8t(H HC[[H 4ff.H\$Hl$HLd$Ll$Lt$L|$HHHHHIIMMHT$PHL$XHHt$`HHhL`HP0HH8Hp@Lh1Lp Lx(HtH !H\$Hl$ Ld$(Ll$0Lt$8L|$@HHH !InputReadsBufferCreate failed! NULL pointer exception in InputReadsBufferCheckStatus(). NULL pointer exception in AIOInputBufferWaitForStatus(). InputFilePointersCreate failed! NULL pointer exception in InputReadsBufferWaitForStatus(). NULL pointer exception in AIOInputBufferClear(). NULL pointer exception in AIOInputBufferCheckStatus(). NULL pointer exception in AIOInputBufferFill(). NULL pointer exception in FinalizeAIOBuffer(). NULL pointer exception in WaitAIOBufferFillFinish(). NULL pointer exception in ResetAIOBuffer(). NULL pointer exception in LoadReadsFromAIOBuffer(). aiob NULL AIOInputThreadCreate() Error in Creating the IO thread. PH RH 9QH 9ERROR fileType! AIOThreadRun args NULL aiob NULL AIOThreadRun() ERROR LoadReadsFromAIOBuffer GCC: (GNU) 4.7.2zRx $A0$AD$AX@DX A t(<P0Df A (lJLVP A (JLVP A (7JLVP A (JLVP A (JLVP A (H6JLVP A (tpJLVP> A L (WAAG a FAA LJG z8_|LBDs I A(l8AAG b FAA 1N )DdANPALBBB B(A0A8J 8A0A(B BBBA LAG0L CA pMjGD] A Ur DL H G A (J[P A .symtab.strtab.shstrtab.rela.text.data.bss.rodata.str1.8.rela.text.unlikely.rodata.str1.1.rela.rodata.comment.note.GNU-stack.rela.eh_frame @ Cx &@ ,@ 12@ E #l@8P T2v#ah#cXQ p0X$yj$p$R p). x5H$3$${H$    @@5`kC @^`03wp7t6>pp  X   W@ L) _R Bz@ 8 1  ?  )j   ]    5    < s  = P Mw G  U  29aio_thread.cpp_Z22InputReadsBufferCreatev.part.0_Z27InputReadsBufferCheckStatusP16InputReadsBuffer12BufferStatus.part.1_Z27AIOInputBufferWaitForStatusP14AIOInputBuffer20AIOInputBufferStatus.part.2stderrfwriteexit_Z23InputFilePointersCreatevcalloc_Z26InputFilePointersSetSingleP17InputFilePointersPv_Z24InputFilePointersSetPairP17InputFilePointersPvS1__Z23InputFilePointersSetBamP17InputFilePointersP4BGZFP12bam_header_tP6bam1_t_Z45InputFilePointersSetPairForScoreRecalibrationP17InputFilePointersPvS1__Z34InputFilePointersSetPairForSnpStatP17InputFilePointersPvS1__Z36InputFilePointersSetPairForDuplicateP17InputFilePointersPP8_IO_FILE_Z34InputMapPointerSetPairForDuplicateP17InputFilePointersPPv_Z43InputFilePointersSetPairForIndelRealignmentP17InputFilePointersPP8_IO_FILE_Z42InputMapPointersSetPairForIndelRealignmentP17InputFilePointersPPv_Z41InputMapPointersSetSingleForCIRealignmentP17InputFilePointersPPv_Z21InputFilePointersFreeP17InputFilePointersfree_Z22InputReadsBufferCreatev_Z26InputReadsBufferFullCreatejjjjPjS_S_PcS0_P14DPInfoForReadsci_Z36InputReadsBufferFullCreateForSnpStatjjjjPjS_S_PcS0_ciP8_IO_FILE_Z52InputReadsBufferFullCreateForSnpStatWithBucketOutputjjjjPjS_S_PcS0_P14DPInfoForReadsciP20PairEndAlignmentInfojP22SingleEndAlignmentInfojPP8_IO_FILES_j_Z38InputReadsBufferFullCreateForDuplicatejjjjPjS_S_PcS0_P14DPInfoForReadsciP13DuplicateInfojPhS__Z45InputReadsBufferFullCreateForIndelRealignmentjjjjPjS_S_PcS0_ciP15ReadWindow_PairjS__Z47InputReadsBufferFullCreateForIndelRealignmentALjjjjPjS_S_PcS0_P14DPInfoForReadscijP15ReadWindow_PairjS_S_S_S__Z42InputReadsBufferFullCreateForCIRealignmentP8CIRegioniPijjjjPjS2_S2_PcS3_P14DPInfoForReadsS2_S2_cijjP20PairEndAlignmentInfojP22SingleEndAlignmentInfoj_Z27InputReadsBufferCheckStatusP16InputReadsBuffer12BufferStatus_Z25InputReadsBufferSetStatusP16InputReadsBuffer12BufferStatus_Z20InputReadsBufferFreeP16InputReadsBuffer_Z21InputReadsBufferClearP16InputReadsBuffer_Z29InputReadsBufferWaitForStatusP16InputReadsBuffer12BufferStatussleep_Z20AIOInputBufferCreateP16InputReadsBufferS0__Z19AIOInputBufferClearP14AIOInputBuffer_Z18AIOInputBufferFreeP14AIOInputBuffer_Z27AIOInputBufferWaitForStatusP14AIOInputBuffer20AIOInputBufferStatus_Z25AIOInputBufferCheckStatusP14AIOInputBuffer20AIOInputBufferStatus_Z18AIOBucketSetStatusP14AIOInputBuffer15AIOBucketStatus_Z21AIOBucketWaitForReadyP14AIOInputBuffer_Z36writeReadsToBucketsAndStoreAlignInfoP16InputReadsBuffer_Z23writeReadsToBucketFilesjjPjS_PcP14DPInfoForReadsP20PairEndAlignmentInfoRjP22SingleEndAlignmentInfoS5_jPP8_IO_FILES_j_Z25addSingleAlignInfoForLanePP22SingleEndAlignmentInfoPjS0_j_Z23addPairAlignInfoForLanePP20PairEndAlignmentInfoPjS0_j_Z18AIOInputBufferFillP14AIOInputBufferRmRjRcPcS1_S2_S3_S4__Z19loadPairReadsGzRAALPPvPjS1_S1_PcS2_P14DPInfoForReadsjjjijP15ReadWindow_PairjRjS7_S1_S1_S1_S1__Z24loadPairReadsGzDRBucketsPPvPjS1_S1_PcS2_P14DPInfoForReadsjjjiP13DuplicateInfojRjPhS1__Z16loadPairReadsGz2PvPcS_S0_PjS1_S1_S0_S0_jjRmRcRjS2_S3_S4_jjiS3_i_Z19resetDPInfoForReadsP14DPInfoForReads_Z12loadBAMReadsP4BGZFP12bam_header_tP6bam1_tPjS5_S5_PcS6_jjjii_Z17loadSingleReadsGzPvPcPjS1_S1_S0_S0_jjRmRcRjjjiS3_i_Z11loadReadsCIP8CIRegionijPPvRP20PairEndAlignmentInfojRP22SingleEndAlignmentInfojPjS9_S9_PcSA_P14DPInfoForReadsS9_S9_jjjijPiRiSE__Z16loadPairReadsGz4PvPcS_S0_PjS1_S1_S0_S0_jjRmRcRjS2_S3_S4_jjiS3_iS4__Z12AIOThreadRunPv_Z17FinalizeAIOBufferP14AIOInputBuffer_Z23WaitAIOBufferFillFinishP14AIOInputBuffer_Z14ResetAIOBufferP14AIOInputBuffer_Z22LoadReadsFromAIOBufferP14AIOInputBuffer_Z20AIOInputThreadCreateP14AIOInputBufferRmRjRcPcS1_S2_S3_S4_mallocpthread_create % 4<hGl }  - 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[BALSA] Number of pairs aligned by new default DP: %u [BALSA] Elapsed time : %9.4f seconds [BALSA] Total Number of pairs aligned: %u [BALSA] %u half-aligned pairs of reads are proceeded to DP. [BALSA] Number of pairs aligned by DP: %u [BALSA] %u pairs of reads are proceeded to deep DP. [BALSA] %u unaligned reads are proceeded to DP. [BALSA] Number of reads aligned by single-end DP: %u [BALSA] Total alignment time for this batch: %9.4f (alignment: %9.4f, GPU index copying: %9.4f) [BALSA] Number of reads aligned by DP: %u [BALSA] Total Number of reads aligned: %u [Main] %u unaligned reads are proceeded to DP. [Main] Number of reads aligned by single-end DP: %u [Main] Number of alignments aligned by DP: %u [Main] Elapsed time : %9.4f seconds [BALSA] Number of reads aligned by ScDP: %u [Main:Thread%u] Crash! aH\$Hl$HLd$Ll$HLt$L|$HHHGH;GHtHpLhLpDHH0LhLpDHLPDJDzDr Im۶m۶mLUDjDbjHPH)HLMt"HHHH)׉L$D$D$L$DKD{Ds DkDckH\$Hl$ Ld$(Ll$0Lt$8L|$@HHfH7Hm۶m۶mH)HHHH<H9III)Hm۶m۶mILLHT$HuHT$IN IM)Mt!LM$LZM\$LzM|$RAT$HHm۶m۶mE1H)HHHtL$LLH}Im۶m۶mO|&E1H)HLMtL$HLLH}MHtMLuLeLmIAI)ILI$I$I$ L9IE1I)ILkLH0  GCC: (GNU) 4.7.2zRx LD#BEB B(A0A8G  8A0A(B BBBA Ll%BBB B(D0A8G C 8A0A(B BBBA 8BBB A(A0(A BBB8 BBB A(A0(A BBBHL\BEB B(A0C8GХ y 8A0A(B BBBC L BEE E(F0D8I 8A0A(B BBBG LOBHE E(D0D8J 8A0A(B BBBI LLB%BBB E(D0A8J  8A0A(B BBBA HBEB B(A0A8G8A0A(B BBBHiBBB B(D0A8GC8D0A(B BBBH4iBBB B(D0A8GC8D0A(B BBBL*%BGE B(A0A8G9 8A0A(B BBBD (J` C H BBB H(D0A8G 8A0A(B BBBK $HJ^P J zPLRx P$ BEE B(D0C8Ji 8A0A(B BBBA 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HL)H@;L$||Ld$PH\$hDD$xHL$`H|$XI$HT$pMM|$H\$D$$HT$1r1ImE1HH|$pHL$h1D$$1H|$H|$XHL$L[BWTEditModelAnyDirection:Case%d] Delete at position %u (i = %d) [BWTEditModelAnyDirection:Case%d] Long Delete at position %u (i = %d, gap len = %d) [BWTEditModelAnyDirection:Case%d] Insert at position %u (i = %d) [BWTEditModelAnyDirection:Case%d] Mismatch at position %u (i = %d) [BWTEditModelBackward:Case%d] Delete at position %u (i = %d) [BWTEditModelBackward:Case%d] Long Delete at position %u (i = %d, gap len = %d) [BWTEditModelBackward:Case%d] Insert at position %u (i = %d) [BWTEditModelBackward:Case%d] Mismatch at position %u (i = %d) GCC: (GNU) 4.7.2zRx LBEB B(A0A8G+ 8D0A(B BBBD 8lHTQ` F  M C M CL%#BBE B(A0A8J 8A0A(B BBBG L BBB B(D0A8G 8A0A(B BBBJ LHBBB E(A0A8G 8A0A(B BBBB 8HTQ` F  M C M CL<BBB B(A0A8V 8A0A(B BBBB L$(BBB B(A0A8J 8A0A(B BBBJ xtBBB B(A0A8G 8C0A(B BBBD y 8A0A(B BBBM j8A0A(B BBBL7BKB B(A0A8GC 8A0A(B BBBI P@BKB B(A0A8G 8A0A(B BBBJ 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HH|$@l$(2׃x)HHD\$@DL$(D,2D(AӃDXD HH|$@l$(2׃x)HHD\$@DL$(D,2|$@D(AӃDDXD HHD9D,DZ2DhE 3DjA)DX DZA\5ADHiE 3DhADjXiDXDZDHA\5AiE 3ADh$X Dji DX,DZDH(A\5AE 3Ai(X0Dh4i0DH8DXHAL)H)J HHHcLEPAQEE AEPD)ډHSH9HzHt{Ht:Lc:L$HSO,IcuI> /etc/security/limits.conf" for permanent solution. Errno:BWTLoad(): SaValue inverseSa0 not match! BWTLoad(): SaValue cumulativeFreq not match! BWTLoad(): InverseSaValue inverseSa0 not match! BWTLoad(): InverseSaValue cumulativeFreq not match! BWTLoad(): SaIndex inverseSa0 not match! BWTLoad(): SaIndex cumulativeFreq not match! Not enough memory to store all SA index groups! Mismatch penalty is not large enough! Cutoff score is too short for gaps! BWTGappedDPDBvsQuery(): Not enough source bit! BWTGappedDPDBvsQuery(): Not enough DPCell buffer! BWTGappedDPDBvsQuery(): Not enough working memory allocated! BWTGappedDPDBvsQuery(): Too many SA index group! BWTGappedDP2(): Not enough working memory allocated! Depth No. of nodes No. of rejected nodes No. of DP Cells Max depth : %d (%d) Max no. of DP Cell : %d (%d) Max amount of DP Memory : %d (%d) No. of accepted path : %lld (%lld) No. of rejected path : %lld (%lld) %3d %10lld %10lld %10lld BWTTextPosition(): SA index group not sorted! BWTSubPatternEditDistMatch(): Not enough memory allocated for hit generation! BWTDPHit(): Error sorting SA index group! 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The file %s is empty!pairpair-multi-bam-BAM%s.bv%s.1list-l-L-u-v-b-s-p-I-D-A-R-c-e-t-snapshot-rf-qc--verbose-@-sc-scF-scEInvalid Argument : %s currentDirectoryNumber of mismatches: %i Output all valid alignmentsOuput all best alignmentsOuput unique best alignmentsOuput random best alignmentsNumber of CPU threads: %u enableDP: %i outputPrefix: %s readGroup: %s readGrpOption: %s rb./merge-binary.sh single %s ./merge-binary.sh pair %s %s ./merge-succinct.sh %s ./merge-sam.sh %s If necessary, %s.dpout.1 %s.gout.%ia Usage: %s Command: pair Alignment of paired-end reads. pair-multi Alignment of multiple sets of paired-end reads. To see the detailed usage for the specific command, please type: -u (default: 1000) -v (default: 1) -@ (default: %d) -t (default under current directory with prefix: asc) -e Exome Sequencing will be launched. -snapshot The output will include SNAPSHOT of ELSA. --verbose Details log will be printed. -L (default: 120) -b %u: No BAM/SAM (default); %u: SAM; %u: BAM -I The input is in the Illumina 1.3+ FASTQ-like format (i.e. Phred+64) (by default, this option is not enabled and presumes Phred+33 format). -p Trim Primers in the list -sc Softclip allowed size in DP (default: %d, %d) -scF Front Softclip size allowed size in DP (default: %d) -scE End Softclip size allowed size in DP (default: %d) -A Assign the sample name (default: "default"). -D Assign the read group ID (default: queryFileName1/queryBAMFileName). -R Assign the read group option Example format: 'LB:...\tPL:...\tPU:...' -s (<=4) disable dynamic programming and perform alignment with mismatches only. If max # of mismatches is not specified, default number is 3 for reads of length >= 50; 2 otherwise. Using this option is not recommended. Note: For SAM output format, mapping quality value is only available when all-best or all-valid output option is selected. Alignment of single-end reads: For read files in FASTA/FASTQ/GZIP format: %s single [options] For read files in BAM format: %s single -bam [options] bwtCodeIndex : The bwt index built by soap3-builder queryFileName : The FASTA/FASTQ query file The read files can be compressed in GZ format. queryBAMFileName : The BAM query file Alignment of multiple sets of single-end reads: %s single-multi [options] %s single-multi -bam [options] bwtCodeIndex : The bwt index built by soap3-builder infoListFile : Each line inside the file contains information of each set of paired-end reads. Column 1: first read file name; Column 2: output prefix; Column 3 (optional): read group ID; Column 4 (optional): sample name; Column 5 (optional): read group options. Delimiter is a tab character and only the following three cases are allowed: Case 1: Only contains the first 2 columns. Case 2: Only contains the first 4 columns. Case 3: Contains all the 5 columns. Alignment of paired-end reads: %s pair [options] %s pair -bam [options] bwtCodeIndex : The bwt index built by soap3-builder queryFileName1 : The FASTA/FASTQ file of the first reads of pairs. queryFileName2 : The FASTA/FASTQ file of the second reads of pairs. The read files can be compressed in GZ format. queryBAMFileName: The BAM file contains both the first and the second reads of the pairs. Alignment of multiple sets of paired-end reads: %s pair-multi [options] %s pair-multi -bam [options] infoListFile : Each line inside the file contains information of each set of paired-end reads. Column 1: first read file name; Column 2: second read file name; Column 3: minimum value of insert size; Column 4: maximum value of insert size; Column 5: output prefix; Column 6 (optional): read group ID; Column 7 (optional): sample name; Column 8 (optional): read group options. Note: If the read files are in BAM format, the second read file name is not needed, and thus there are at most seven columans. Delimiter is a tab character and only the following three cases are allowed: Case 1: Only contains the first 5 columns (or 4 columns for BAM). Case 2: Only contains the first 7 columns (or 6 columns for BAM). Case 3: Contains all the 8 columns (or 7 columns for BAM). Error : %s does not exist! Please check your ini setting or input arguments. Error : %s is not a directory! Please check your ini setting or input arguments. Error : %s is a directory! Please check your ini setting or input arguments. Error : %s should be a prefix not a directory Error. Inside %s, there exists a line which does not indicate the name of query file 1. Error. Inside %s, there exists a line which does not indicate the name of query file 2. Error. Inside %s, there exists a line which does not indicate the minimum value of insert size. Error. Inside %s, there exists a line which does not indicate the maximum value of insert size. Error. Inside %s, there exists a line which does not indicate the output prefix. Error. Inside %s, there exists a line which contains an empty field for read group ID. Error. Inside %s, there exists a line which contains read group ID but does not indicate the sample name. Error. Inside %s, there exists a line which contains an empty field for read group other option. Miss the keyword 'pair' or 'pair-multi'. Invalid number of command-line arguments. Please specify the length after '-L' The length should not be less than 0 The length should not be greater than %u Please specify the maximum value of insert size after '-u' Please specify the minimum value of insert size after '-v' Please specify the output file format after '-b' The value after '-s' should be between 0 and 4 Please specify the temporary directory after '-t' Please specify the read group ID after '-D' Please specify the sample name after '-A' Please specify the sample name after '-R' Please specify the GPU device ID after '-c' The GPU device ID should not be less than 0 Please specify the Exome Region Index after '-e' Please specify the maximum value of insert size. Please specify the minimum value of insert size. The minimum value of insert size should not be greater than the maximum value of insert size. Since an option '-D' is specified, both options '-A' and '-R' have to be specified too. Since an option '-A' is specified, the options '-D' has to be specified too. Since an option '-D' is specified, the options '-A' has to be specified too. The value after '-b' should either be %d:No SAM/BAM(Default) or %d:SAM or %d:BAM ----------Parameters------------------Upper bound of insert size: %u Lower bound of insert size: %u -------------------------------------- Cannot open gpuOccValueFile %s Memory allocation error. Please check: 1. You've got enough memory left. 2. Kernel memlock size was set as 'unlimited'. Type 'unlimit -l' to check the value. Type 'unlimit -l unlimited' to solve the problem. Use root account to run command "echo '* - memlock unlimited' >> /etc/security/limits.conf" for permanent solution. Errno:Cannot open lookupTableFile %s SOAP3 only supports lookup table size of %u, please re-build index. Cannot open revGpuOccValueFile Cannot open revLookupTableFile Please type the following command to merge the alignment results into one file:you may use 'samtools' to concatenate all the alignment results into one BAM file:./samtools cat -o [output].bamplease type the following command to merge the alignment results into one file:AWAVAUATUSH8D$x$h$$D$@L$hH$XH$`$D$${D$$(D$H$`H$pH$hH$xH$H$0H@HP8Lh0LXHH$HLH$PL$L$H$PH$pHDŽ$(EH HqPH$AD$HH$HDŽ$t$$tH$H$$H$L$L$H$pD$0G$8LAD${ALW$"D $"$D$AD"$$@AD$H$AFH$DZ(J,rEDBD$@$DŽ$$$t#H$H$DX,B,D$$H$H$zIAIIAD9$DB$$dJD$L$AqAAIE9t}titUtAt-tAL$AIAAIAAIAAIAAIAAIAAIE9sLAAA@A@A@ A@A@A@A@I E9rD9$ D$DE)DDEL$fwI9fLJtztetTtBt1t tfALJ fAIfAIfAIfAIfAIfAI9s:fAfAAfAA fAA0fAA@fAAPfAA`fAApI9rEE9 DH$Aw$IcL9$AIKthtVtDt2t tAwIKHHHHHH9$vGAAA AAAAH 9$wD$@EaCD$$D$@$D$$D $$@$$#$#D"$@"$#H$D$D$$$#D$$RD$D$$@"$${L$8@$SL$H$H$ $@$@$D$"D$Lc$PL$`DŽ$AD!${L$H@$$${$D$D $${$E!E!D$p$I $D$D$D$MAL$L$hAD$A$ED$$$pD$AHD$H$E1$TDŽ$${$H$DŽ$HDŽ$HDŽ$HHDŽ$DŽ$DŽ$HDŽ$$$|H$fDD$$H$L$0L$8Lc$$pL$hED$DD$I 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BackwardDNAOccCountNoLimit(): DNA occ sum exception! ForwardDNAAllOccCountNoLimit(): DNA occ sum exception! BackwardDNAAllOccCountNoLimit(): DNA occ sum exception! ????????????????????????GCC: (GNU) 4.7.2zRx 0?D5XWlJ'&,BOF   HEH 8BPR F(F09 (A ABBA ,Di XOx I _ A |O H _O F OPKBPB D(F0 (A BIEE D (J BEEA $0AON AG <XGBQH A(A0  (A BBBA (JPC AB<BEB A(F0i (A BBEA <BGE A(A0 (A BBDG 8DBEF A(G0 (A ABBA 80BGD A(G0(A ABB.symtab.strtab.shstrtab.rela.text.data.bss.rodata.str1.8.rodata.comment.note.GNU-stack.rela.eh_frame @>X &@>,@>12@>@@? 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1F5d90DNACount.cpp_ZZ18ForwardDNAOccCountPKjjjS0_E17truncateRightMask_ZZ19BackwardDNAOccCountPKjjjS0_E16truncateLeftMask_ZZ21ForwardDNAAllOccCountPKjjPjS0_E17truncateRightMask_ZZ22BackwardDNAAllOccCountPKjjPjS0_E16truncateLeftMask_ZZ16Forward1OccCountPKjjS0_E17truncateRightMask_ZZ17Backward1OccCountPKjjS0_E16truncateLeftMask_ZZ25ForwardDNAOccCountNoLimitPKjjjS0_E17truncateRightMask_ZZ26BackwardDNAOccCountNoLimitPKjjjS0_E16truncateLeftMask_ZZ28ForwardDNAAllOccCountNoLimitPKjjPjS0_E17truncateRightMask_ZZ29BackwardDNAAllOccCountNoLimitPKjjPjS0_E16truncateLeftMask_ZZ20ForwardDNA_NOccCountPKjjjS0_E17truncateRightMask_ZZ21BackwardDNA_NOccCountPKjjjS0_E16truncateLeftMask_ZZ23ForwardDNA_NAllOccCountPKjjPjS0_E17truncateRightMask_ZZ24BackwardDNA_NAllOccCountPKjjPjS0_E16truncateLeftMask_ZZ27ForwardDNA_NOccCountNoLimitPKjjjS0_E17truncateRightMask_ZZ28BackwardDNA_NOccCountNoLimitPKjjjS0_E16truncateLeftMask_ZZ30ForwardDNA_NAllOccCountNoLimitPKjjPjS0_E17truncateRightMask_ZZ31BackwardDNA_NAllOccCountNoLimitPKjjPjS0_E16truncateLeftMask_Z24GenerateDNAOccCountTablePj_Z18ForwardDNAOccCountPKjjjS0__Z19BackwardDNAOccCountPKjjjS0__Z21ForwardDNAAllOccCountPKjjPjS0__Z22BackwardDNAAllOccCountPKjjPjS0__Z16Forward1OccCountPKjjS0__Z17Backward1OccCountPKjjS0__Z25ForwardDNAOccCountNoLimitPKjjjS0_stderrfwriteexit_Z26BackwardDNAOccCountNoLimitPKjjjS0__Z28ForwardDNAAllOccCountNoLimitPKjjPjS0__Z29BackwardDNAAllOccCountNoLimitPKjjPjS0__Z26GenerateDNA_NOccCountTablePj_Z20ForwardDNA_NOccCountPKjjjS0__Z21BackwardDNA_NOccCountPKjjjS0__Z23ForwardDNA_NAllOccCountPKjjPjS0__Z24BackwardDNA_NAllOccCountPKjjPjS0__Z27ForwardDNA_NOccCountNoLimitPKjjjS0__Z28BackwardDNA_NOccCountNoLimitPKjjjS0__Z30ForwardDNA_NAllOccCountNoLimitPKjjPjS0__Z31BackwardDNA_NAllOccCountNoLimitPKjjPjS0__Z15ForwardOccCountPKjjjj_Z8ceilLog2j_Z16BackwardOccCountPKjjjj_Z18ForwardAllOccCountPKjjjPj_Z19BackwardAllOccCountPKjjjPj  @>   0 G  $ % & @$ 8%& V$[ pj%t& $  /%9&  @  #" *# @( ) ,43145494 4H\0p@ 0H@\p04"\ &p), 1H59/134 1483027668 1939 1168 100644 4880 ` ELF>@@ AWAAVAUATUHxSH$H$L$L$H$HH$H$H$H$L$HSHKHL$D$D$L$L$L$H$H$H$H{ HsLC(LK0DS8D[X@@AWIAVAUATUHxSHL$@H$H$L$L$H$PHH$XL0H$HH$hH$`HSHKHCL$pD$D$L$xL$L$H$H$H$H{(Hs LC0DK8DSL[L^HCHFDKDNHIwI;wHSHtLSLLbLfLBLFRVHI;wHS8IwHtHK8HHzH~LZL^BFHIwHTL9$K$L$IvL,HL)MlHL$[AI;vPHt%L$MLIRHVIJHNAz~HIvH$HL9MIt~It=IvI;v HtLLHCHFLKLNDcDfHIvHIvI;vHtLLLCLFHSHVKNHIvHIvI;vHtH;H>L[L^HCHFDKDNHIvHL9IvI;vTHtL#L&LSLVLCLFSVHHIvIvI;v9HtH HH{H~L[L^CFHI;vHSIv"HtLKLLbLfLRLVDBDFHI;vHS8IvHtHK8HHzH~LZL^RVHIvHTL9H$H$@HHHH$IIvIm۶m۶mE11H)HIHtifHHHsH)HH;sHtL LLRLVLBLFJNHHsIM^ADI)IML9rL$L$@H$<H$8D$0H$8D$(D$$$H$H$H$H$L$L$HD$xDL$pL$L$L$H$L$DT$hDD$`L$X|$PHT$@LHt$8DŽ$8DŽ$<L\$HLl$0Ld$(HD$ LL$L$L$L$H$H$H$L$D$Hl$LT$L$H$@H$0H$8$0H$ D$(D$D$H$H$$H$L$H$Ht$xH$H$D$pDL$hL$H$L$DT$`DD$XL$PH|$HHT$8HHt$0D$8D$<DŽ$ DŽ$0L\$@HD$(LL$ L$L$Hl$H$L$H$L$H$D$H$LT$Hl$I>D$ D$0HtLMtI?HtLHtH;HtHH$tH$H$H$tH$H$H$H$H$tH$H$L$L$ H$E.E'HH[]A\A]A^A_H"L$DŽ$At$E $ET$AT$ ED$AL$AD$IfL$H$AH$EH$HD$L$H$%H$GL$I$THLHIvI;vHLIvI;vHSLIvI;vHS8fDLLIwI;wHS8tfDLHLHIwI;wHLIwH$LH$L^HL)HLHL&HLHLHL3H$H$AD:H$H$HD$HHHH$HHH$HLHLHH$HH$HH .H=1H=D1H$H$H .4DjI"#"#"#"""$"""" ""#w"H\$Hl$HLd$Ll$HLt$L|$HHHGH;GHtHpLhLpDHH0LhLpDHLPDJDzDr Im۶m۶mLUDjDbjHPH)HLMt"HHHH)׉L$D$D$L$DKD{Ds DkDckH\$Hl$ Ld$(Ll$0Lt$8L|$@HHfH7Hm۶m۶mH)HHHH<H9III)Hm۶m۶mILLHT$HuHT$IN IM)Mt!LM$LZM\$LzM|$RAT$HHm۶m۶mE1H)HHHtL$LLH}Im۶m۶mO|&E1H)HLMtL$HLLH}MHtMLuLeLmIAI)ILI$I$I$ L9IE1I)ILkLH[DPfunc] error: main memory allocation failed DPForSingleReads.cpperror at %s: %u hihi %u %u GCC: (GNU) 4.7.2zPLRx P$BEB B(A0I8G 8A0A(B BBBA zRx $J^P J PJBBB B(A0A8O 8A0A(B BBBA .symtab.strtab.shstrtab.rela.text.data.bss.gcc_except_table.rela.text._ZNSt6vectorIN14SingleDP_Space7SeedPosESaIS1_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS1_S3_EERKS1_.rodata.str1.8.rodata.str1.1.comment.note.GNU-stack.rela.eh_frame.group@ PJ) &,1HPC3x2/2201CH4 P x P$     -V;J"JipuSDPForSingleReads.cpp_ZL4addr_Z19DPForUnalignSingle2P24BothUnalignedPairsArraysPjS1_S1_PcS2_P14DPInfoForReadsjP3BWTP3HSPS6_S1_S1_S1_S1_S1_S1_S1_S1_S1_S1_jjiP12DPParametersRjSB_jiP8_IO_FILEP9samfile_t__gxx_personality_v0_Znwm_ZN13QueryIDStreamC1EP24BothUnalignedPairsArrays_ZN13QueryIDStreamC1Ev_ZN14SingleDP_Space15CandidateStreamC1Ev_ZN14SingleDP_Space22SingleEndSeedingEngine14performSeedingEP13QueryIDStreamP12DPParametersPjS5_iP12SOAP3WrapperIvEP3BWTPNS_15CandidateStreamES2__ZN14SingleDP_Space24SingleEndAlignmentEngine16performAlignmentEPNS_15CandidateStreamEP12DPParametersPjS5_iPcS5_S6_P14DPInfoForReadsP3BWTP3HSPSA_S5_S5_S5_S5_jjijiP8_IO_FILEP9samfile_tP13QueryIDStreamRjSJ__ZdlPv_ZN13QueryIDStreamD1Ev_ZN14SingleDP_Space23DPSOutputUnalignedReadsEP13QueryIDStreamPjS2_iP3HSPPcS2_S5_jiP8_IO_FILEP9samfile_t_Unwind_Resume_ZNSt6vectorIN14SingleDP_Space7SeedPosESaIS1_EE13_M_insert_auxEN9__gnu_cxx17__normal_iteratorIPS1_S3_EERKS1_memmove_Z18DPForAlignedSingleP24BothUnalignedPairsArraysPjS1_S1_PcS2_P14DPInfoForReadsjP3BWTP3HSPS6_S1_S1_S1_S1_S1_S1_S1_S1_S1_S1_jjiP12DPParametersRjSB_jiP8_IO_FILEP9samfile_tmallocfree_ZN14SingleDP_Space24SingleEndAlignmentEngine33performAlignmentForPreparedRegionEPNS_15CandidateStreamEP12DPParametersPjS5_iPcS5_S6_P14DPInfoForReadsP3BWTP3HSPSA_S5_S5_S5_S5_jjijiP8_IO_FILEP9samfile_tP13QueryIDStreamRjSJ__Z25inputSoap3DedupAnsToArrayP7AllHitsjP3HSPP3BWTijhstderrfwritefprintfexitE'1<pcpxJ/9Lepz 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Annotation number of sequence = 0! Ambiguity database length not match! Ambiguity database number of sequence not match! Ambiguity number of ambiguity not match! Translate database length not match! Translate database number of sequence not match! [Translation] Missing actual chromosome lengths. Re-build Packed indexes for more accurate chromosome length in output. ParseFASTToPacked() : Cannot open FASTAFileName! ParseFASTToPacked() : Cannot open annotationFileName! ParseFASTToPacked() : Cannot open packedDNAFileName! ParseFASTToPacked() : Cannot open ambiguityFileName! ParseFASTToPacked() : Cannot open translateFileName! ParseFASTToPacked() : FASTA file does not begin with '>'! HSPGappedExtension(): Not enough DP cells allocated! HSPGappedExtensionWithTraceback(): alignmentPool is not allocated! HSPGappedExtensionWithTraceback(): Not enough DP cells allocated! Forward gapped extension traceback error! Backward gapped extension traceback error! HSPDPDBvsQuery(): Query position is larger than query length! HSPDPDBvsQuery(): Not enough traceback buffer! HSPDPDBvsQuery(): Not enough query buffer(1)! HSPDPDBvsQuery(): Not enough source bit space! HSPDPDBvsQuery(): Not enough dropoff space! HSPDPDBvsQuery(): Not enough source bit for dropoff! HSPDPDBvsQuery(): Not enough temp alignment buffer! HSPDPDBvsQuery(): Not enough gapped hit buffer! Count histogram of gapped extension by expectation value: #Effective query length reaches zero. #Unable to compute Karlin-Altschul parameters. HSPPrintAlignment(): Alignment length > maximum! HSPPrintAlignment(): Alignment error! Identities = %d/%d (%.2f%%), Gaps = %d/%d (%.2f%%) HSPPrintAlignment() : Output format is invalid! Score E Sequences producing significant alignments: (bits) Value # Query id, Subject id, %% identity, alignment length, mismatches, gap openings, q. start, q. end, s. start, s. end, e-value, bit score ACGTMRSVWYHKDBNLLLLLLLLLLLLLLLLL  !"#$%&'()*+,-./0123456789:;<=>?@ABCDEFGHIJKLMNOPQRSTUVWXYZ[\]^_`abcdefghijklmnopqrstuvwxyz{|}~X>N}a+H}M???$@@X@BGCC: (GNU) 4.7.2zRx 00^DfXvlYDBKB B(D0A8W 0A(B BBBJ LoBEJ E(D0D8GR 8D0A(B BBBD L@v BBE E(A0D8GP 8D0A(B BBBI AL&BBJ E(D0D8G" 8D0A(B BBBA XQBBB B(A0A8 0A(B BBBD 0A(B BBBLX"BBB B(D0D8G ! 8A0A(B BBBA L8BGB B(A0A8G U$ 8A0A(B BBBK LCBBB B(D0A8G B 8A0A(B BBBA 0HAMG N DAH tCAL|oBJB B(A0A8N 8A0A(B BBEH LWBLB A(C0 (A BBEF (A BBD`BLB B(G0C8G@ 8A0A(B BBBI 8C0A(B BBB$)LAHJP m AI0uD$&A\D,JII D(G`(A ABBF`4tBRA I(F0(A ABB(JL R H W I S(IJG0NARG0p$=8=(LAI K EF bA(xAFD@ AAG HBBJ B(A0D8Jl8A0A(B BBB`BLB B(A0A8G` 8A0A(B BBBI d 8A0A(B BBBB TA.symtab.strtab.shstrtab.rela.text.data.bss.rodata.str1.1.rodata.str1.8.rodata.rodata.cst16.rodata.cst8.rodata.cst4.comment.note.GNU-stack.rela.eh_frame @!ArT&dA,dA12dA@2DyOM` WMPe0OHrxO0|OOOh V \ 0 h   @1    =BG M@S0Y _ e k q w (} 0 8 @P`p 0@  0$0^WfvY80 oQX^ey~'v ",1W^p 11& PXQ{^"08QlйC5noWp)hH` p$+0&K``P* PN ` = 0= p  k 0> @AHSP.cpp_ZL14ambiguityCount_ZL14ambiguityMatch_ZL7dnaChar.LC0.LC1.LC38.LC44.LC43.LC58.LC59.LC61.LC63.LC65.LC67.LC85.LC90.LC92.LC96.LC97.LC98.LC99.LC100.LC101.LC102.LC103.LC104.LC105.LC106.LC107.LC108.LC109.LC110.LC111.LC118_Z24HitListPosTextQueryOrderPKvii_Z41GappedHitListPosTextQueryLengthScoreOrderPKvii_Z41GappedHitListPosTextQueryScoreLengthOrderPKvii_Z41GappedHitListEndTextQueryScoreLengthOrderPKvii_Z31GappedHitListEnclosedScoreOrderPKvii_Z14HSPFillCharMapPh_Z20HSPFillComplementMapPh_Z20HSPFillScoringMatrixPA16_iiii_Z7HSPLoadPKcS0_S0_S0_jcmallocfopenfscanf_Z14MMUnitAllocatemfeoffclose_Z12DNAMapPackedPKcPjjstderrfwriteexitfgetsstdout_Z13DNALoadPackedPKcPjjj_Z18HSPConvertFromTextP6MMPoolPKhjjiiPKc_Z14MMPoolDispatchP6MMPooljstrncpyr250_initr250_Z23ConvertTextToWordPackedPKhPjS0_jjmemcpy_Z10MMUnitFreePvm_Z16MMUnitReallocatePvmmstrlen_Z7HSPFreeP3HSPjc_Z13DNAFreePackedPvjjcfree_Z21HSPParseFASTAToPackedPKcS0_S0_S0_S0_ji_IO_getc_Z23ConvertTextToBytePackedPKhPhS0_jjfprintf_Z20HSPUngappedExtensionPKjS0_S0_jjjP19HitListWithPosQueryjPK25HSPUngappedExtLookupTableii_Z18HSPGappedExtensionPKjjPKhiPK19HitListWithPosQueryiP13GappedHitListP6MMPooliiiiii_Z12MMPoolReturnP6MMPoolPvj_Z31HSPGappedExtensionWithTracebackPKjPKhiP13GappedHitListiP6MMPoolS6_PK9SeqOffsetPK9Ambiguityiiiidistat_gapNominal2normalizedstat_gapCalcEvalue_Z20MMPoolDispatchOffsetP6MMPoolj_Z14HSPDPDBvsQueryPKjPK7HitListiPK9SeqOffsetPK9AmbiguityiPKhiPKiS0_P26GappedHitListWithAlignmentiP6MMPoolSH_iiiiid_Z19MMPoolByteAvailablePK6MMPool_Z29HSPRemoveDuplicateUngappedHitP19HitListWithPosQueryj_Z5QSortPviiPFiPKviiE_Z30HSPSplitCrossBoundaryGappedHitP13GappedHitListjjPK9SeqOffsetii_Z27HSPRemoveDuplicateGappedHitP13GappedHitListj_Z14HSPFinalFilterP26GappedHitListWithAlignmentj_Z28HSPCalUngappedExtLookupTableP25HSPUngappedExtLookupTableii_Z28HSPGenUngappedExtLookupTableP6MMPoolii_Z29HSPFreeUngappedExtLookupTableP6MMPoolP25HSPUngappedExtLookupTable_Z20HSPAllocateHistogramddlog10ceilfloor_Z22HSPInitializeHistogramP9Histogram_Z16HSPFreeHistogramP9Histogram_Z25HSPCountEvalueToHistogramP9HistogramPK26GappedHitListWithAlignmentiisprintfsscanf_Z17HSPPrintHistogramP8_IO_FILEP9Histogrampow_Z14HSPPrintHeaderP8_IO_FILEiPKcijfputc_Z26HSPPrintInvalidReadTrailerP8_IO_FILEiPKcij_Z15HSPPrintTrailerP8_IO_FILEiPKcijprintHSPstatistic_Z18HSPPrintInvalidHitP8_IO_FILEi_Z19HSPPrintNoAlignmentP8_IO_FILEi_Z28HSPCalculateAndPrintBitScoreP8_IO_FILEi_Z26HSPCalculateAndPrintEValueP8_IO_FILEi_Z17HSPPrintAlignmentP6MMPoolP8_IO_FILES0_PK26GappedHitListWithAlignmentiiPK11ContextInfoPKhSA_PKcSA_iPKiPK3HSP_Z19HSPPrintQueryHeaderP8_IO_FILEiPKciPKiS4_PK10Annotationi_Z12getChrAndPosPjP9TranslateyPyPt    Y !q        !( "9 #J $[ %l &} '[ 9  :  ; <# <D =a ><f<v99==<<f n: n;<=/ F;=>? 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?V? h?A?{?t@ O@A6@ l=@VE@ L@Va@ .k@V@ @V@ @V1RfYRMtDA>VtA)tHAit 40H\p0 D' 11PX\^0йL p`p00`x`PP(<0Pp|0>X@HSPstatistic.o/ 1483027667 1939 1168 100644 15656 ` ELF>@@@ UHLSLH8H1H H5H9B.?H5 H=H $Y^,$,%Yd$^ĉ=4$D,|$Y^DD,HHH-^D D$(LL*MH-I*HL*DY A\AYXH H^$L*fE(H5D\\$(HD]E\H*LMM*EYA\AYXLM^KM*fE(HD\t$(HD]E\H*HHL*EYA\AYXH5H^rH*f(H=\L$(H]\+H*L MI*Y\YXLM^I*f(H-\l$(H]\YH*H H$H*Y\Y=HXH^=H*\D$(]D,LMcL)L L HM)ILHH8[]fIڃLII M*MEXTLAH-HL H*HXCHHH L*EX-fHHHH H*XH΃HH H*XfDHHH H*XfDLAHL H*XJDMAIM I*XDIII I*XfDHHH H*XyfDHHH L*EXDH݃HH H*XfDMAIM M*EX@MAIM M*EXE@HHH H*XfDHʃHH L*EXDHH^HD$^H H*HnH=H*H~H*Y\YXL M^I*f(L\l$M]\I*H HnH*Y\YXH5H^H*f(L\|$M]\I*LMM*AY\YXHH^EL*fE(H5D\T$HD]E\H*H=HL*EYA\AYXL M^lM*fE(LD\l$MD]E\!I*H HL*EYA\AYD=H=DXHD^=H*\D$HA]HƒH HH H*HXH΃H=HH H*HXIII I*Xm@HHH H*X\D$HA]H΃HH L*EXDLAHL H*XDMAIM M*EX}@III M*EX%DHHH H*XfDHHH L*EXDMAIM M*EXM@MAIM I*XDHHH H*XfDHʃHH H*X}fDLAHL H*XGDMAIM I*Xffff.HHSH9HFHHH*HH*H=HYH*^YX^L ,MI*Y^^,9O[fHHHH H*HXOHރH=HH H*HXY?III I*X*MAIM I*XFDHHHx0H*Y^^H,HƒHH H*XffffUHSHH HHٺHٺ H H1 H1H1HH1H1H1HH1HH1H߸*Y^H߸*Y^HHH9HFHIH5H*HYH*H-HYiH*^YX^L ,MdI*Y^^,оH߸9O*Y\^LMI*Y^^$,H$*Y\^H[]DHH5HH H*HXHH-HH H*HXYIII I*XLAHL H*XDMAIM I*XDHYX^H,fD*Y\^HHf(Hx,H*$ $H^f(HƒHH H*XfHHHx@H*^f(^YX^H,HƒHH H*Xf*Y\^HYX^\H,fffff.HHf(Hx,H*$ $H^f(HƒHH H*XfHHHx0H*Y ^f(^H,HƒHH H*X4@>@I@$@Lambda K H %10.2f %10.2f %10.2f Gapped %10.2f %10.2f %10.2f Matrix: blastn matrix: %d %d Length of query: %d Length of database: %llu Effective HSP length: %d Effective search space: %llu X1: %d (%2.1lf bits) X2: %d (%2.1lf bits) S1: %d (%2.1f bits) S2: %d (%2.1f bits) Gap Penalties: Existence: %d, Extension: %d Effective length of query: %d Effective length of database: %llu ??@?GCC: (GNU) 4.7.2zRx (AGGP AAC HD w M  I lKO C WDw E (ANL0 AAJ *Da(<WD p L XgDG E t2DiWD p L WDw E .symtab.strtab.shstrtab.rela.text.data.bss.rodata.str1.1.rodata.str1.8.rodata.cst8.comment.note.GNU-stack.rela.eh_frame @gh$@ &8,122@2(tO(\0ezu;   |  !' -DH\h`|pP%*=CT0c(u@   K"08 WK@ \P k` p  0*`WgP7p2RWeWHSPstatistic.cpp.LC1.LC2.LC3.LC20.LC21initializeHSPstatisticstat_minimumSubjectSizestat_ungapHstat_numOfSequencesstat_ungapLambdastat_ungapKstat_log2stat_gapHstat_databaseSizestat_gapLambdastat_gapKstat_averageSubjectSizelogstat_ungapLogKstat_gapLogKstat_XdropoffsInBitsceilstat_ungapXdropofffloorstat_gapXdropoffstat_querySizestat_numOfContextstat_gapXdropoffFinalstat_adjustmentLengthstat_effectiveQuerySizestat_effectiveDatabaseSizestat_effectiveSearchSpaceSize_Z21stat_calcLengthAdjustvcalcUngapCutoffScorestat_expectationValuecalcGapCutoffScoregetUngapXdropoffgetGapXdropoffgetGapXdropoffFinalprintHSPstatisticfwritefprintfstat_scoreBlockstat_ungapNormalized2nominalstat_ungapNominal2normalizedstat_ungapCalcEvaluepowstat_ungapEvalue2nominalstat_gapNominal2normalizedstat_gapNormalized2nominalstat_gapCalcEvaluestat_gapEvalue2nominal&.@GOV^hot| !" #" $&%.5&H]y $ $2Xz$$?^fm$|"'()*$ 2M Zbi$t$?GN$Yp$1:A$R  $ %       *% - -2 : ? 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MMPoolSetInactive() : spillover memory not freed yet! MMPoolFree() : cannot allocate memory! MMPoolFree() : cannot locate pool in master! MMPoolDestory() : cannot locate pool in master! MMPoolDispatch(): memSize = 0! MMPoolDispatch(): cannot allocate memory! MMPoolDispatchOffset(): mmPool == NULL! MMPoolDispatchOffset(): memSize = 0! MMPoolDispatchOffset(): Not enough memory in memory pool! MMTempDispatch(): memSize = 0! MMTempDispatch(): cannot allocate memory! MMTempReturn(): address != lastSpilloverAddress! Last allocated temp memory must be freed first MMBulkCreate() : cannot allocate memory! MMBulkCreate() : number of bulks > maxNumberOfBulk! MMBulkDestory() : cannot locate bulk in master! MMBulkDispatch() : memory directory size overflow! MMBulkDispatch() : cannot allocate memory! MMBulkLoad() : cannot allocate memory! MMBulkLoad() : number of bulks > maxNumberOfBulk! PH + Pool number %u Pool Size : %u Dispatched : %u Bulk number %u Memory allocated : %u Memory dispatched : %u MMUnitAllocate : %lu MMUnitReallocate MMUnitFree : %lu GCC: (GNU) 4.7.2zRx &A0KD a A L8`BED C(F@l (A ABBJ 2b8+BED D(F0 (A ABBC PlN0X A $pUJMG@ I A` G P;T` 'AI  AA   43NH \p0aBAA G0  DABA <YBOB A(E0 (A BBBL $ ADD ~AA4A~ I PJQ@ I t,JQ0 H Q` G P$dAKG HCA@qBAC G0  DABE P  KAEA D(BGD } ABC  ABF c AQG $pdAKG HCAHBEE E(D0C8D` 8D0A(B BBBD    #4 (HCAAG  AAD tqAM J 4AAG0 AAF N AAH l$kADG UAA8BQA  ABE P EBE HXBBB J(A0D8D` 8D0A(B BBBD .symtab.strtab.shstrtab.rela.text.data.bss.rodata.str1.8.rela.text.unlikely.rodata.str1.1.comment.note.GNU-stack.rela.eh_frame @ /N0&`/,`/P 12`/E[5&@~`T25c0G6lY6`6|~ =A  8HG&   +29>KKZPfk`P 2`b   . T0 {P + l UP0;P@'bp ~3 !BaYYnp, d3qOk!d!%  %0% P%#-% O%Cf&q`(`))l)k`* P+AMemManager.cpp_Z14MMUnitAllocatem.part.0stderrfwriteexit_Z8MMMallocmposix_memalign_Z6MMFreePvfree_Z18MMMasterInitializejjiP8_IO_FILEmmMaster_Z33MMMasterCurrentTotalByteAllocatedv_Z34MMMasterCurrentTotalByteDispatchedv_Z29MMMasterMaxTotalByteAllocatedv_Z30MMMasterMaxTotalByteDispatchedv_Z32MMMasterSetMaxTotalByteAllocatedv_Z33MMMasterSetMaxTotalByteDispatchedv_Z19MMMasterPrintReportP8_IO_FILEjjjfprintffputc_Z14MMUnitAllocatem_Z16MMUnitReallocatePvmmmemcpy_Z10MMUnitFreePvm_Z26MMUnitCurrentByteAllocatedv_Z22MMUnitMaxByteAllocatedv_Z17MMUnitPrintReportP8_IO_FILE_Z12MMPoolCreatej_Z14MMPoolIsActivePK6MMPool_Z17MMPoolSetInactiveP6MMPool_Z31MMPoolCurrentTotalByteAllocatedPK6MMPool_Z32MMPoolCurrentTotalByteDispatchedPK6MMPool_Z28MMPoolMaxTotalByteDispatchedPK6MMPool_Z19MMPoolByteAvailablePK6MMPool_Z10MMPoolFreeP6MMPool_Z15MMMasterFreeAllv_Z11MMPoolResetP6MMPool_Z13MMPoolDestoryP6MMPool_Z14MMPoolDispatchP6MMPoolj_Z11leadingZeroj_Z20MMPoolDispatchOffsetP6MMPoolj_Z12MMPoolReturnP6MMPoolPvj_Z17MMPoolPrintReportP6MMPoolP8_IO_FILE_Z14MMTempDispatchP6MMPoolj_Z12MMTempReturnP6MMPoolPvj_Z17MMTempPrintReportP6MMPoolP8_IO_FILE_Z12MMBulkCreateP6MMPooljjjj_Z14MMBulkIsActivePK6MMBulk_Z17MMBulkSetInactiveP6MMBulk_Z19MMBulkByteAllocatedPK6MMBulk_Z20MMBulkByteDispatchedPK6MMBulk_Z20MMBulkUnitDispatchedPK6MMBulk_Z10MMBulkFreeP6MMBulk_Z13MMBulkDestoryP6MMBulk_Z14MMBulkDispatchP6MMBulk_Z13MMBulkAddressPK6MMBulkj_Z18MMBulkFindPoolUsedPK6MMBulk_Z17MMBulkPrintReportP6MMBulkP8_IO_FILE_Z10MMBulkSaveP6MMBulkP8_IO_FILE_Z10MMBulkLoadP6MMPoolP8_IO_FILEfread) . 0= Gy(0  <D$?$r$$$$$$$$$$#$3$C$S$!4G^k{" )8gw$b ix$  ,  4  ,! ,1 8 4A 4f m ,r X   4          % %  / < HP W  t  $ 9  $ J  b  9 @ G O ] c h r   <  D z  <+F<MXD` zg| ,,44<D #D2 7 AUZa,j,ov44<D   !*/ ]x    # ( 7 AH R Yc  0 #,,,184A4S| * / > HO T hc m$ ,,44" 1$$  3,:CJP _,,44<4$%.5,>,CJ4QY4`gm<}4D  D $,,444,x,     G1,G<N]De zlx }     1     x   H #,,,184A4HOX^<h~D   %   Hj< D z% * 9 CJ O ^ hm,,44( i n u ,~ ,  4 4    <  D   0  ! )!4! %;!F!  M!^! H!0!0"<"O"$##<##D# z $X$q$<x$$D$ z$$ $ $ $$$ $ $ %%%,%,%%4%4%% %Q&Z&a&,j&,o&v&4}&&4&&4&&<&&D& &&>& '$;' N'''',',''4'4''''<( (D( (#(/( 4( C( M(() ) 8#) -)4) 9) pH) R)) )* J*(* bx* * * * * * + j+0+F+F+F+F+F+F,0u,F,,%-5-$.F. . . .. . / // Q7x p!W*H+   " 4PPd` `   0 P T t P@$p8L`t8pTx,t!!% %0%$P%8%L%x&`(`))) `*\P+MemoryCounter.o/1483027667 1939 1168 100644 2160 ` ELF>@@ HHtHH #HHtHH #[BALSA] Memory Allocation Failed. GCC: (GNU) 4.7.2zRx 8DN A 88DN A T.symtab.strtab.shstrtab.rela.text.data.bss.rodata.str1.8.comment.note.GNU-stack.rela.eh_frame @  &,12$@0I^hY(H hh  `8&-49@8HP[MemoryCounter.cpp_Z7xmallocymallocstderrfwriteexit_Z8xreallocPvyrealloc_Z5xfreePvfree   * 4 EV [ j t  <@XMiscUtilities.o/1483027668 1939 1168 100644 58272 ` ELF>@@ AWAAVAUATUSD$DT$؅Ht$T$:ȉL$D$EAEEE*Hct$T$D|$HD$E1D$Ht$T$+L$D+l$L$L$L$Dl$A9ϋL$OL$D)\$L\$L\$E11D|$AD$Dl$AE~O111E11!AA E9xHA9~!A,;ADeAvHE1A9AAID9|$uDL$Dl$D|$DDD$D9D$DT$DT$t$Hc|$H|$H|$E\0EAEAExE9~/E<w @/AHWE9rEGAAAAAtSAt)ExE9~DGEHAwA DGAHExE9~2~@w @2AHExE9~D"Al$@wA D"AHExE9~D@Aw AHExE9~D Aq@wA D AHExE9~D"A|$@wA D"AHExE9~*E<w @*AHE9"ExE9~DEHAwA DHAxE9~2DfAw @2D׃xA9~jE<w @jEAxE9~DJAq@wA DJEAxE9~j}@w @jDЃxA9~DBEHAwA DBDփxA9~DbAl$@wA DbD׃xA9~BD@Aw BAHE99\$E1DT$DT$L\$T$L\$T$D;|$[]A\A]A^A_SDLcB,kAD9~ DL$D|$AB,4@1; tn; ttytdtOt:t%tH;H]H;HMH;H=H;H-H;HH;H DbA9u$McAt$B Lc;;H;H;H ;H;H;HH ;HuLcB,f.D9D;l$ED\$IcADT$H\$H\$AExE9~DJAw AA9AD;l$LcEt/ExE9f~sn@w @sAA9dExE9~A$x@w A$A]9AQIAxE9~E,$EEAwA E,$DkA9AID;l$uDl$E11 E15D$ D$@11E1AWIAVAAUAATUSHBHN|$Ht$@@AAGL MDI@EM$IXAFIt$IL$H9H9@ AEARAoD$AA@@ttetKt1tAoL$ AHAoT ATHAo\ A\HAod AdHAol AlHAot AtHAo| A|HA9v|EoD EDEoL ELEoT $ET$Eo\ 4E\4Eod DEdDEol TElTEot dEtdEo| tE|tHA9wE9AsA^AEAA9EEAtmAtYAtFAt2AtAt AA^كA4A4AۃCCAڃCCكA4A4AۃCCAڃC9CscD[DSA4A4CKCCD[CA4DSA4CKCCD[9CA4A4CCrDe11ۺAA@9!DADD)AAtMA@t91ۃv/ED$ADD)HAD\91ۃv/DADD)HADDdA9?9XAABD)HD\6ADA9B1ۃv+\D$ADD)HqDTAD0A9BE1v+3DAEE)HYCt$AD9wTAAF$ADD)H DdADA9EDI 9ZE]EEADEI 92AAAtfAtKAt0AtADI 9ADI 9ADI 9AEK 9AEK 9ADI 9DAK 9toET$K 9t`AT$I 9tQA\$I 9tBAL$I 9t3At$I 9t$E\$K 9tADI 9xHD$ A N 1AAvjAIvPDSL$E1NDA+L8At99u9tHL9uԃC!9vA9l$[]A\A]A^A_DADAzurDA1EALD$ABDDAF$ 1!DAD$A?AAF$AucDA[D%AAAF$A1mDD$AAFADA.fDHcHcҋ 9t9D1ffff.AWAVAUATUSHxH|$(HL$0'AփHcAADDl$Lt$D$dD$ɉL$HD$ D$K9щD$JHcI+L$L$h\$L9\$|LD$ALD$(DAIcHH)IH|$8fDD9L$DLD$ AD9L$}DD$dE&l$dLcd$dB\pF\$D+L$D|$\$LL$hat$3t$\$#\$LD$0H|$(t$AЅ!'Dd$AHL$(DHT$(DMcLMcL|$K&HBHqH9@H9AD σAD&EfoAo AA EAAAAtcAtAAtoQA oZYRo$Ao,,$Ho4Ao<<4HDoADo D 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HHHHHHHHHLDI;AN4AHH?H H:L9MItoIt5LIzLIyH HxHH<LI<L I<HHH<LI|L I<HL9HH<HH<L I<LI|HH|H H|LI|LI|H H|LI|LI|H H|H L9*HHH IIHHIII@I4MDHIIIHHHHHe[A\A]A^A_]rb%s.gout.%d%s.dpout.1%s.unpair%s.donerCannot open queryFile: %s %s.bv%d -> %d %s.dedup.gout.%d%s.dedup.dpout.1%s.dedup.unpair%s.dedup.donea%s.sc.incR%s.sc.decRwb%s.ra.csw[BALSA] DP Realignment [BALSA] Sort DP Result[Score Recalibration] Sampling from %s and %s Error in reading the read file: %s. [BALSA] Loaded %u subset of reads from the query file. [BALSA] Loaded time : %9.4f seconds Dynamic programming is disabled because read length < %i All reads are directly processed by DP, because the read length > 150Maximum number of mismatches allowed: %i [BALSA] Number of Convergence Test : %d [BALSA] Finish Score Recalibration : Converge[BALSA] Recalibration time : %9.4f seconds [BALSA] Finish Score Recalibration : Not Converge[BALSA] Error in Score Recalibration : Problematic Dataset. [BALSA] Overall number of pairs of reads aligned: %llu [BALSA] Overall read load time : %9.4f seconds [BALSA] Overall alignment time (excl. read loading) : %9.4f seconds [BALSA] Retrieving Recalibrated Scores ================================| Recalibrated Score |[BALSA] Error in opening bucket files [BALSA] Error in stating bucket files [BALSA] Map Error in opening bucket files (%u) Could not open the output file %s [BALSA] Overall number of pairs of reads loaded: %llu [BALSA] Map Error in opening bucket files [BALSA] Loaded %u subset of reads (%u read pairs) from the query file. [BALSA] Overall alignment time (excl. read loading) : %9.4f seconds [BALSA] Handle %u alignment information [BALSA] Sort Alignment information[BALSA] Elapsed time : %9.4f seconds [BALSA] %u of alignment results having long Indel [BALSA] Identify long Indel for realignment[BALSA] Identify %u best Indel Pattern Insufficient space for extra pattern [BALSA] Modify Reference with Indel Pattern Sequence[BALSA] Select Best Alignment Results[BALSA] Finish Indel Realignment for %u alignments [BALSA] Total elapsed time on Sorting alignment information : %9.4f seconds [BALSA] Total elapsed time on Modifying references with Indel Pattern Sequence: %9.4f seconds [BALSA] Total elapsed time on DP : %9.4f seconds [BALSA] Total elapsed time on Sorting DP results : %9.4f seconds [BALSA] Total elapsed time on Selecting best alignment results : %9.4f seconds  ?GCC: (GNU) 4.7.2zPLRx P$BBB B(A0A8D 8A0A(B BBBA HxBBB B(D0A8DP8A0A(B BBBzRx FT q08BAI IЀ AABlEbLb%BBB B(A0A8J ) 8A0A(B BBBI  EL w BBE E(A0A8G  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gfofofqfffofof8f8ffHB0gfofofqfffofof8f8ffHB@gfofofqfffofof8f8ffHBPgfofofqfffofof8f8ffHB`gfofofqfffofof8f8ffHBpgfofofqfffofof8f8ffHgfofofqfffofof8f8ffHgfofofqfffofof8f8ffHgfofofqfffofof8f8ffHgfofofqfffofof8f8ffHgfofofqfffofof8f8ffHgfofofqfffofof8f8ffHgfofofqfffofof8f8ffHgfofofqfffofof8f8ffAHE9fffff~A1GCC: (GNU) 4.7.2zRx d8 L.symtab.strtab.shstrtab.rela.text.data.bss.comment.note.GNU-stack.rela.eh_frame @P &@,@10@:ROX`JH Yh  7 Z0}  0 ssse3_popcount.cpp_ZZ15ssse3_popcount1PhiE9MASK_4bit_ZZ15ssse3_popcount2PhiE9MASK_4bit_ZZ15ssse3_popcount3PhiE9MASK_4bit_Z15ssse3_popcount1PhiPOPCOUNT_4bit_Z15ssse3_popcount2Phi_Z15ssse3_popcount3Phi ! +  1 ; 0 < P0 TextConverter.o/1483027668 1939 1168 100644 28744 ` ELF>L@@At9F )ыDAB< AwB#fAUAATUHHSH(HIlIDIDσJWADmAHEtltRtDt6t(tt D(HHHHHHqEЈA)H9v.DYqEЈXXXE)؈XXXXH9wMAA)ADAAEfAnōOIf`9ICfafpfA tqt]tMt=t-tt fIC fHfHfHfHfHfH9s2ffHfH fH0fH@fHPfH`fHpH9rDE)E9AA~AAEB\AD9EtjAtTAtCAt4At%AtAt\=~\5\ \\AB\ AD9B\tGAD_wOWGDODWD9B\-B\\5\ \\B\ B\uD$19@HL$1HLDD$Aw;<$D9ABDD=LtLH(C[]A\A]fH !H(1[]A\A]A1tH +fDE1DDB1D A9DTHA9txD\HA9tjDLHA9t\DTHA9tND\HA9t@DLHA9t2DTHA9t$HH=uIIgDB IIKff.Ѹ 1fff.1Ҹ 1҉Dfff.1Ҹ 1҉fff.H1҉1҉lj9BHAи11҉9r BR@1Ҹ1҉Dfff.1Ҹ1҉fff.AWAVAUIATIUHSHDD$ A1҉A1AƋD$ AD$1E1D)f.EF 7AT AӉEE1AA9ӍWAFD)D9EtyAtHAt D\CAA9ӍWEFD)D މD\=C<AA9EF؃D)D މD\=C<AA9EF؃D)D D9D\=C<AA9DAGDZD) B|A< 2^32! ReadCharMap() : Cannot open character map! ReadCharMap() : Invalid charMap! ReadTextAsWordPacked() : Cannot open inputFileName! ReadBytePackedAsWordPacked() : Cannot open inputFileName! DNALoadPacked() : Cannot open inputFileName! [DNAMapPacked] Using shared index in host memory Memory allocation error. Please check: 1. You've got enough memory left. 2. Kernel memlock size was set as 'unlimited'. Type 'unlimit -l' to check the value. Type 'unlimit -l unlimited' to solve the problem. Use root account to run command "echo '* - memlock unlimited' >> /etc/security/limits.conf" for permanent solution. Errno:DNALoadPacked(): Cannot determine file length! SaveText() : Cannot open output file! SaveBytePacked() : Cannot open output file! SaveWordPacked() : Cannot open output file! InitialLoadPackedIncFromEnd() : Cannot open inputFileName! InitialLoadPackedIncFromEnd(): Cannot determine file length! InitialLoadTextIncFromEnd() : Cannot open inputFileName! InitialLoadTextIncFromEnd(): Cannot determine file length! LoadTextIncFromEnd(): file pointer is not correctly placed! PH 0r %c %u rbwbGCC: (GNU) 4.7.2zRx &A0GLDBEA L(DP5 (D ABBJ _ (C ABBA (Dc,g$8HLRBBB E(D0F8FP 8A0A(B BBBE HBEE B(A0D8I@7 8A0A(B BBBC H BBE G(A0D8G@ 8A0A(B BBBB H0oBBB E(F0D8G@& 8A0A(B BBBD H|BBE G(A0A8G@ 8A0A(B BBBB LBEE H(A0C8G 8A0A(B BBBE L{BBB G(G0C8G7 8A0A(B BBBA h|HBEH E(A0A8D`8A0A(B BBBHBBB E(A0A8Dp 8D0A(B BBBG L(BBE B(A0A8D 8D0A(B BBBF ,x BDI  EBA HBJE B(A0A8GP 8D0A(B BBBA ) }JQ x E $,JLG@ A $TJLG@ A (|gJLQ B IJI n("JMQP A JP0a E .symtab.strtab.shstrtab.rela.text.data.bss.rodata.str1.8.rela.text.unlikely.rodata.str1.1.rodata.comment.note.GNU-stack.rela.eh_frame @%@ \&h@,h@12h@EE&@l`T2CEc`E k0EtEEm0 LP0 W &:     ^elqGP$C X@(rp,R@  8o^`@"{`*+-5/Xlr 13 48)$9}79R:m;g>IP>"?TextConverter.cpp_Z24TextLengthFromBytePackedjjj.part.0_ZZ17GetWordPackedTextPKjjjjjE4maskstderrfwriteexit_Z17GetWordPackedTextPKjjjjj_Z11ReadCharMapPhPKchfopenfscanffeoffclose_Z22GenerateReverseCharMapPKhPh_Z20BitPerWordPackedCharj_Z8ceilLog2j_Z24TextLengthFromWordPackedjjj_Z24WordPackedLengthFromTextjj_Z14LastWordLengthjj_Z20BitPerBytePackedCharj_Z24TextLengthFromBytePackedjjj_Z24BytePackedLengthFromTextjj_Z14LastByteLengthjj_Z23ConvertTextToWordPackedPKhPjS0_jj_Z23ConvertTextToBytePackedPKhPhS0_jj_Z23ConvertWordPackedToTextPKjPhPKhjj_Z23ConvertBytePackedToTextPKhPhS0_jj_Z23ConvertBytePackedToCodePKhPhjj_Z29ConvertWordPackedToBytePackedPKjPhjj_Z29ConvertBytePackedToWordPackedPKhPjjj_Z17ConvertTextToCodePKhPhS0_j_Z17ConvertCodeToTextPKhPhS0_j_Z20PackTextWithAllShiftPKhPPjS0_jj_Z20ReadTextAsWordPackedPKcPKhjPjj_Z14MMUnitAllocatemfread_Z10MMUnitFreePvm_Z26ReadBytePackedAsWordPackedPKcjPjjmemcpy_Z12DNAMapPackedPKcPjjfilenommapmlockperror_Z13DNALoadPackedPKcPjjjfseekftell_Z13DNAFreePackedPvjjcmunmap_Z8SaveTextPKcPKhj_Z14SaveBytePackedPKcPKhjj_Z14SaveWordPackedPKcPKjjj_Z27InitialLoadPackedIncFromEndPKcPhjjPjS2__Z20LoadPackedIncFromEndP8_IO_FILEPhj_Z25InitialLoadTextIncFromEndPKcPhjPjS2__Z18LoadTextIncFromEndP8_IO_FILEPhj2 _ i[ c h 8E]   zg#(#--!/ ///,0-C0!h0-0.00!01 1161 @1W111,1,1-2-B2'a20x2-2'2.2.2V3'33 333 33-4 4 8'4742Q43_44l4|44 4444 p44 4544 4575885-_5,676-688 8888 889 9:9[9`9 o9y99 99 :':>:F:f:k: z::: ::;(;?;G;g;l; H{;;; ;;<7<8><-<7<7<-<7m=7=7=== x==== ==#>-~> >>7>8>7>->7+?0? 8??I?P?U? d?n??8?7?-@@ x@!@8.8:T9E>7?7 " 4HP @p(<P@  4`@"l`*+-/, 1|348 909X:;>P>?Timing.o/ 1483027667 1939 1168 100644 2936 ` ELF>@@ H1HH*L$H*$^ HX@H(1H|$D$H*L$H*D$^ X\D$H(Df(H\$Hl$Ld$A0Ll$HHA0^ I%0.0f sAąLT$IDD$DL$,E;عA<)ډAكf(t%ֿ1L4$4$Etf(Ht$LH\$(Hl$0Ld$8Ll$@HHf.E\A<Af(*\f.f(r<*\f(AAAAD)*fھL14$4$#Dk@GCC: (GNU) 4.7.2zRx ,D c4;D0v L`P K pAW.symtab.strtab.shstrtab.rela.text.data.bss.rodata.str1.1.rodata.cst8.comment.note.GNU-stack.rela.eh_frame @M 8 &,12 @M0Vkf ` XuP  0  ,-:0;Np|0Timing.cpp.LC0.LC1.LC2_Z12setStartTimevgettimeofday_Z14getElapsedTimed_Z25printElapsedTimeNoNewLineP8_IO_FILEiiiiidfprintf_Z16printElapsedTimeP8_IO_FILEiiiidfputc  BX   !I  ;I 80Ppt0/273 1483027667 1939 1168 100644 4088 ` ELF>@@ UE1HA"SH1HHHHuHXHhH[]H=1ffff.HSHtHwHH[[fffff.SHH<H;Aw9uHy1[fffff.Hl$H\$HHoHDDH;Gw-DuH1HHDH\$Hl$Hf.SH4H;Aw1uHy1[f.Hl$H\$HHo4H;Gw,7uH1HHDH\$Hl$HfHGfMemory Pool Out Of Memory Error PH SimpleMemoryPool.cppmadvise error at %s: %u GCC: (GNU) 4.7.2zRx &A(0AWI x AAA \"DV F A|2Ak A VN B A 6Hh A WN C A .symtab.strtab.shstrtab.rela.text.data.bss.rodata.str1.8.rela.text.unlikely.rodata.str1.1.comment.note.GNU-stack.rela.eh_frame @ &T,`12`!E&@`T2.c0l|    x c&   <CJO_dls{"2V`6W.KSimpleMemoryPool.cpp_Z12pmallocIndexP10MemoryPoolm.part.0stderrfwriteexit_Z10createPoolmmmapmadvisemallocfprintf_Z11destroyPoolP10MemoryPoolmunmapfree_Z12pmallocIndexP10MemoryPoolmmemset_Z7pmallocP10MemoryPoolm_Z14premallocIndexP10MemoryPoolPvmpfreeTimes_Z9premallocP10MemoryPoolPvm_Z10getAddressP10MemoryPoolj_Z5pfreeP10MemoryPoolPv"5C_ i n u9Rb  " 4`` dictionary.o/ 1483027668 1939 1168 100644 20096 ` ELF>7@@ AWAVAUATIUHHSH(HT$g A $PA Ή1ftfft@tA\$Aى ω1G IDAA ADD1GIDAA ADD1G4IDAA ADD1CIщ Ή1CIى ω1G IDAA ADD1D9GG|C\GTDAA DGlAAA1ED D1Ctډ AAA1C|ED DAAA1CLEEA EEAE1AD D1AA AEAIE1AEA EDD1D9DD D1AAE|DuuEDt$t$o'LuE1HI6H\$Ht H} D9?>H;\$&HHHHHtkHtFHt!I4^AHtLM E9<PHI4^L,HtLU E9<IHI4^L,HtHM D9<BHI4^L,HtL] E9<;HI4^L,HtLE E9<|HI4^L,HtHE D9<uHI4^L,HtH} D9<nHH;\$L$9L$DL$ELUI:t$IBN HAAH;IBxtjtEt HN4HIH;,LHHL4H;LB LHHL4H;LjLHHL4H;HzHHHL4H;LJLHHL4H;HrHHc;L$H8L4HLZL@_HxLN4LLhBHHxLL4Hx$HxISHLH L4Hx ISLHp(L4Hx(ISHHH0L4Hx0ISHL@8L4H@I8ISLL4ISHc;L$L4L,K2LH1LuH|$t H|$ILU G<*EH([]A\A]A^A_LAHSI4VL,HtLM E9| HrL,6I4vHtH] D9|ILRK4VO,HtHM D9|ILZ K4^O,HtLE E9| IHBI4FL,HtH} D9|ILJK4NO, HtH] D9|IHrL,6I4vHtLU E9|IHZH;\$RI4^L,HHU D9<fDL,LH$H$LeMI<$Ht LeM1H|$t H|$I$H([]A\A]A^A_DLH$H$fDLH$H${LH$H$[LH$H$;LH$H$LH$H$LH$H$LtL{LHH;\$7@LkLSL;L#AH]AAAIcIcHHIHDEH]LmF,AIcIcHHIHEH] LuD,HcIcHHIH}Lu |$}gfE1H]E1E1LE1E1fSH'pA щ1ʃtatCt{AAA ADD1F IDAA ADD1B4 I щ1B< IAA ADD1F IDAA ADD1B4 I щ1B< IAA ADD1D9F BL DAA Dډ1BT Ή AAA1Bt AEA EFD EAE1AD DF\ 1DAA AB| DD1Dډ BT 1AA AEAIE1AEA EDD1D9 ҉ 1AAD[D1[@Hl$Ld$HcLl$H\$H(AA A(HD`DhHHHCHHCHl$HC HLd$H\$Ll$ H(fDATHUHSttW1E1~:HEH<HtHMH<HtAHD9eH}H}H} [H]A\[]A\ff.AWAVAUIATUSH(H|$HHT$AMPA Ή1tfft?tA]Aى ω1ClIAA ADD1GTIDAA ADD1GdIDAA ADD1G|ID ʉ1CtI ˉ1C|I ͉1D9GLGdCTC|DAA DAAA1CLEGdEA EEAE1ACTD D1C| AAA1AEA EEAE1EEA EEAE1AD DI1 1D9DD D1AAE<HL$DqEHiHLa EVAE9<$AE5AtrAt^AtJAt6At"AtE9<HE9<HE9<HE9<HE9<HE9<<HE9<^HA9HD$H([]A\A]A^A_@HtL LLL$HE9L[G9<`HA9[E9<iHE9tA_ډ ׉1E/HDAA ADD1E/HDAA ADD1E$/HDAA ADD1A4/H щ1A/Hډ ׉1E/HDAA ADD19E/Et/A\/EL/DAA DE\/AAA1ED AAt/DD1ى AAA1A|/EEA EDD1ET/DAA AEAE1AD D1AA AEAHE1EEA EDD19,҉ 1EeE^MuA1JE1AI.HT$Ht Iu 9,H;\$M?IIIItiItEIt I,^AHt I} 9 HI,^LHtM] A9 HI,^L$Ht IE 9 HI,^HHtME A9 +HI,^L Ht Iu 9 =HI,^LHt I} 9 OHI,^LHtMe A9 `HH;\$-H([]A\A]A^A_HLHT$L$HT$L$DLcK,fLO$HtMM C9 !I\$I,^LHtIu B9L&iI\$I,^LHtI} B9L'xI\$ I,^HHtIE B9L I\$I,^LHtMM C9L!I\$I,^LHtIu B9L&I\$I,^LHtI} B9L'I\$H;\$I,^HHIE 9 HLL$LD$HT$L$HHT$Lt$M}K7MeK<4HtLt$IELD$JMM AAmH([]A\A]A^A_fHLL$LT$HT$L$rnfDHLL$L\$HT$L$c>fDHLHT$L$HT$L$TfDHLL$LD$HT$L$EfDHLL$LT$HT$L$6fDHLL$L\$HT$L$'~fDHLL$LD$HT$L$NfDHLL$LL$HT$L$fDHLL$LT$HT$L$fDHLL$Ld$HT$L$fDHLHT$L$HT$L$fDHLL$LL$HT$L$^fDHLL$LT$HT$L$.fDHLL$L\$HT$L${fD1fH\$Hl$HH1HHHtHtHHHH$H$Hf.H\$Hl$HHHHHtHtHHH_H$H$HAVHAUIATUSt[HHtS~Vw1E1A~;HUHHt!HELH HID1uAHA9|[]A\A]A^[]A\A]A^H%d%gUNDEFempty dictionary %20s [%s] GCC: (GNU) 4.7.2zRx d BBB B(D0G8D`m 8A0A(B BBBA  8A0A(B BBBF <A1 F C JQ0~4BDD d DBL AABHBBB E(A0A8D`( 8A0A(B BBBE HPBBB E(A0A8D`( 8A0A(B BBBE HBBB E(A0A8D`' 8A0A(B BBBF dBBB B(A0D8D`9 8A0A(B BBBD  8C0A(B BBBL Pdd7BEB H(A0A8D` 8A0A(B BBBA  8A0A(B BBBC VQDYQGL BEE A(A0^ (A BBBA A(A BBB.symtab.strtab.shstrtab.rela.text.data.bss.rodata.str1.1.comment.note.GNU-stack.rela.eh_frame @S3@@ &3,3123)@03I3^3XYHM8 (7h:  =Q >EU\aho <  0 4;"fm))72V`2Y2BJdictionary.cpp_Z14dictionary_setP12_dictionary_PcS1_.part.0strlen_Z9inistrdupPKcstrcmpfreecallocmemcpy_Z15dictionary_hashPc_Z14dictionary_newii_Z14dictionary_delP12_dictionary__Z14dictionary_getP12_dictionary_PcS1__Z18dictionary_getcharP12_dictionary_Pcc_Z17dictionary_getintP12_dictionary_Pcistrtol_Z20dictionary_getdoubleP12_dictionary_Pcdstrtod_Z14dictionary_setP12_dictionary_PcS1__Z16dictionary_unsetP12_dictionary_Pc_Z17dictionary_setintP12_dictionary_Pcisprintf_Z20dictionary_setdoubleP12_dictionary_Pcd_Z15dictionary_dumpP12_dictionary_P8_IO_FILEfprintffwrite R m     0 P p      $  <  d  |        * 2  U f n   < T e v       O  / v    . ^     6 f    N  F r    . U     6 f       J  z    ! 5! b! ! ! ! " F" v" " & & ' A' q' ' ' ( -( Y( ( ( ( ) E) u) ) - . . / `/ / / / 0 P0 0 0 0 1 @1 p1 1 1 2 "2x2 22 3 3J3   &O3    0T"T)h)2`22IniParam.o/ 1483027667 1939 1168 100644 10504 ` ELF>h@@ ATUSH1HHHgHAHھHPCbLc HALLLCHCHxHA HIHCDHC HC#HA HLH(CCH'HC$HC(HC,HC0HC4HC8HC@(HCP1ҾHCL@HCTHCXHC\1ҾHC`1ҾHCd1ҾHCh HCl HCpHCqHCr HCsHCt1ҾHCx1ҾHC|HHHHHHHHHHHHHHHHHHHHHHHHHHHH-H7HKH HHHH H H$1ҾH(H,H0 H41ҾH81ҾH<H=1H[]A\DC@LHuACCfDCD 1HC<,f.LHuCCtfDCC[Dƿ1:@L1[ParseIniFile] File not found![ParseIniFile] Invalid value for Ini_NumOfCpuThreads(%u)! [ParseIniFile] Invalid value for HostAlignmentModel(%s))! [ParseIniFile] The program only supports number of mismatches for soap3 alignment between 0 and 4.[ParseIniFile] The program only supports GPU with at least 3G memory.PairEnd:MaxHitsEachEndForPairingOtherSettings:ProceedDPForTooManyHitsOtherSettings:SkipSOAP3AlignmentRAW:GeneRegionLongIndelSupportThresholdRAW:NonGeneRegionLongIndelSupportThresholdRAW:TandemRepeatIndelSupportThresholdRAW:TandemRepeatMmSupportThresholdWORKFLOW:SkipScoreRecalibration.saDatabase:SaValueFileExtAlignment:NumOfCpuThreads16GAlignment:HostAlignmentModel8GAlignment:Soap3MisMatchAllowDEFAULTDP:DPScoreThresholdAlignment:MaxOutputPerReadDevice:GPUMemory+/-PairEnd:StrandArrangement+/+-/+-/-PairEnd:MaxOutputPerPairDP:MatchScoreDP:MismatchScoreDP:GapOpenScoreDP:GapExtendScoreDP:DiagonalWidthScore:MinMAPQScore:MaxMAPQIndex:ShareIndexReads:MaxLenReadNameClipping:MaxFrontLenClippedClipping:MaxEndLenClippedScore:BWALikeScoreBALSA:Weight0BALSA:Weight1BALSA:Weight2BALSA:Weight3BALSA:IndelQualityThresholdBALSA:memoryPoolCapBALSA:statMapqThresholdBALSA:statTrimSizeBALSA:statSoftClipThresholdBALSA:ScMatchScoreBALSA:ScMismatchScoreBALSA:ScGapOpenScoreBALSA:ScGapExtendScoreBALSA:IndelCallHqThresholdBALSA:IndelCallLqThresholdBALSA:RA_MaxBestPatternBALSA:RA_SupportThresholdBALSA:BalanceSubErrorBALSA:UnbalanceSubErrorRAW:RAW_P1RAW:RAW_P2RAW:RAW_P3RAW:RAW_P4RAW:RAW_P5RAW:RAW_P6RAW:RAW_P7RAW:RAW_P8RAW:RAW_P9RAW:RAW_P10RAW:RAW_P11RAW:RAW_P12RAW:RAW_P13RAW:RAW_P14RAW:RAW_P15RAW:RAW_P16RAW:RAW_P17RAW:RAW_P18RAW:RAW_P19RAW:RAW_P20RAW:RAW_P21RAW:RAW_P22RAW:GeneRegionLongIndelRAW:NonGeneRegionLongIndelRAW:TandemRepeatIndelRAW:TandemRepeatSearchRangeWORKFLOW:SkipDeduplication{Gz?{Gzt?GCC: (GNU) 4.7.2zRx 4BAA I0i  AABF .symtab.strtab.shstrtab.rela.text.data.bss.rodata.str1.8.rodata.str1.1.rodata.cst8.comment.note.GNU-stack.rela.eh_frame @h &,12@2p Oh\0xezPu( ((  P4  8N!(/IniParam.cpp.LC54.LC56_Z12ParseIniFilePcR9IniParams_Z14iniparser_loadPci_Z20iniparser_copystringP12_dictionary_PKcPcS2_i_Z17iniparser_getuintP12_dictionary_PKci_Z16iniparser_getintP12_dictionary_PKci_Z19iniparser_getdoubleP12_dictionary_PKcd_Z18iniparser_freedictP12_dictionary_strtolprintfputs( 0 5? G_ 6d :u W 6 Z w  w  %6 ; LV |  P   ! 1 C  T! b,3 p>H S] hr } x        & 318 GCJ _U_ rmw        1-5 @ KHU a` ew y       '1 ?I Wa oy      $ 0  <! 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N.(_. 2j. o. &z. .X(. . . .  .n(.(.#(./(//F(-/X(I/(Z/e/ l/(/ B/(/ ǎ/(/(/(/(/(0)&0 20 @0 Y0 d0 o0 Q0 .0>0 0C0 070 0 0 1 :1 U1 Hf1 w1 1 1 +1 1 1  2 \%2 D2 h2 =~2 2 2 a2 (2 o2 _ 3 o 3 ;3 XX3 w3 3 3 3  3 _3  q 40 \`@X((sam.o/ 1483027701 1939 1168 100644 33280 ` ELF>@G@@AV1AUATIUSHI$HEID$HEID$HEID$HEID$ HE ID$(HE(I\$0H]0ID$8H{HE8ID$@HE(HEHE HE@HE@It$@HHDmMcLHHELHEHH1E;fDHEHUIL$L,ڋ ID$H<IECH9E[H]A\A]A^ffffff.AVIAUIATUHSHrHHHD#bHDHrAD#A}-t<LHHCHIHCHL[]A\A]A^A}uH=wHIHtLbHHCH9EAt8PЀ HUfHH uAuHH$wA0 Dd$A}-D$SA}HH=HHHC}HsHIfLHHCKHHHCM9LHIHCLm@Lu0HP0MA|t щ ȉ  ȉ ƍG  ȉ  ȉ 9;I|$@McHLLMt$0ID$@Mt$0B0HHC0vIfDHL=IH=1}D`$HE1UA}-5LHHCtϾXHHm hHIH1IHCLHP0H@@IU0IE@HCIE0IE@HKHP0Hx@AEHS 1E1~2fHBH{A (HBHh1HHSD9"LIU=|H &\AE1A}H;t~H KkI|$@HcIT$0ID$@HxHH xA0bDHSHtWHHtH{u/uH[DH[f.H[f[fffff.HHt(t"uHwHHf.ATHUSHtlueuPHHHHsHIHs HAD$[]A\[]A\HݐAVIAUA8ATIUHSLHHDHHHHLHy1HHtH{0H[]A\A]1A^fffff.ATHUSHHxIHLHIHA$.faiAD$HIt []LA\Htn=EHIuH (E1HDE1H "H=Hھ1Zrw@SQ SN:%s LN:%d [samopen] no @SQ lines in the header. [samopen] SAM header is present: %d sequences. [samopen] inconsistent number of target sequences. Output the text header. [samfaipath] fail to read file %s. [samfaipath] build FASTA index... [samfaipath] fail to build FASTA index.  8intZ__&{'M)1f4m1  M     ( 0 8 @ H P  X "` $h &Mp *Mt ,x 0F 1t 2 6 ? H I J K L- NM P     M_?_?  MfdM    M $ M4 M8 M< M@ H P X  ` !h $p $xM?%) fpr* fpw+X$ %M &_ ' 'x, 0M 1M 2 3( 40 5M8 6M< 7M@ 8TH 9P: 6H We X Ye Zk [ [ [( \-0 \-8 ]@ ^ tid pos bin           |8 h  M M$ M( h0 # ' b   M M    aux n  :@ !QWMzMz" # $. %E & 'n  ybam   " Mx  "q s " !lenM"xM"yM# "!F $h0 F %h "%i M&'-(Us(T1'H(Qs'- (U~(T4'-8 (U~(T8&eL q#' $fn'T)'T$aux'%fp)*n+ ,/--/-.-/-/M/ 0E@%iFM-FM/ ,L--L-1-L-LM'{ (Uv(Tu&' (Tw&2(U}(Tw/ -8"33; 4?4?4U4J15`5i' (T}(Q~&!'< (U~2R(Uv+ % ,Q--Q-. -Q-QM/ %iXM%altY"&'do (U}'z (T1' (T 'R (U}2(U (T1(QK'- (U1(TH'{ (Uv(Tr'{< (Uv(Tb'a (U}(T &&' (T '{ (Uv(Tw's (U~'{ (Uv(Tb'(U}&'2(T '%J(Us'7o(U}(T '{(Uv(TX'{(Uv(Th'(U (T1(Q&2{(Uv(Tx(f_?6sb$fps&R&V7%o(UU&k7%(UU&}8%(UU#}M6$fp}$b}7 (QT9#M $fp$b+D%s%lM'(TT'(Uv'(Uv'(U:2%(Uv99#Mv$fp)M)E)%bufv%retM%b'-(U1(T8'T(Uv(T~'o(Uv(T}'(Us'(U|(Ts'<(U0(Tv'T(Uv&%2%(Us#)T-'(Us'-(U|(T1'H(Uv(Ts'+(Uv(T4'H(Us(T4'`(Us'(U (T1(Q('%(Uv'(U (T1(Q"2(T (Qs:::; M< ~"-=> H--?e?> {T@ TM>UMAFMT> MF AMTT@ !T8> <-> G"RTB d"> XMz">--->cMT=@ 888> "> .yT> N"%yB 7CVTTAMkB 4}yATM> =My"> M> F M>-T>MT>AM9M> MT> +voEB )vM> -MvB ,v> MTMD4MT% : ; I$ > $ >  I&I &  : ; : ;I8 : ;  : ;  : ; I8 I!I/  : ; I8  : ;  : ; I : ;  : ; I 8  : ; I 8 : ;I< : ; : ;I8  : ;I 8  : ;I 8 'II : ; I.: ; '  : ; I!: ; I"4: ; I#.?: ; 'I@B$: ; I%4: ; I&1'1(B): ; I* : ; + ,4: ; I-4: ; I. / U04: ; I1 U2131RUX Y 415416.?: ; '@B7B18B19B1:4: ; I?<;4: ;I?<<.?: ;I<=>.?: ;'I<?.?'I4<@.?: ; n'I<A.?: ; 'I<B.?: ;'<C.?: ;n'I<D.?: ; 'I<U\!UPV!P0P S P0?U?]US]SU]U]U;]0JTJVT"V"TVHTHYVYpTp'V'TVT;V0SQS^QW^WQp^pQ^Q;^_cPcS;S11]] }-}7W0Wgqvp}qv}\0TY\\26\11]] }-}7>P>VVWmPm\\W^^S]][eqekQkrRryPyRPtTTq1&q1&q!2&!q1&q1&q!2&!q!4&!q1&q1&q!2&!q1&q1&q!2&!q!4&!q!8&!q1&q1&q!2&!q1&q1&q!2&!q!4&!q1&q1&q!2&!q1&q1&q!2&!q!4&!q!8&!q!@&!q!#cUPRPRPRRpp1121p]pU]U2]p{ }-}#.0.A\AW|W`\Pp]]@MUMnSnrUrsUsSUUSUUSUUUUUUTQTQTQ U MSMQUQYSY`U`eUeoSTQTQdTdeTeoT!P!LV,L\pU\UpT]TpQVQpR^RPVTVTVPPPS$U$nSnuUu S909IPImVuV0 V, 7 P`7Wp1 /cm/shared/apps/gcc/4.8.2/lib/gcc/x86_64-unknown-linux-gnu/4.8.2/include/usr/include/bits/usr/includesam.cstddef.htypes.hstdint.hstdio.hlibio.hknetfile.hbgzf.hbam.hsam.hstdlib.hstring2.hstring.hunistd.hfaidx.h  1+LV?HsL=WuYIg]VhVZY==ut;Kg.thg׀> u#yI6Q[enpsam.cbam_header_dupbam_header_initcallocmemcpy__strdupsamopenstrchrbgzf_openbam_header_readstdinfilenobgzf_fdopenstdoutbam_header_writesam_opensam_header_readsam_header_read2strncpybam_header_destroybam_verbosestderrfprintffreefopen64sam_header_parsefwritereallocsamclosefclosesam_closebgzf_closesamreadsam_read1bam_read1samwritebam_format1_corestrlenfputsfputcbam_write1sampileupbam_plbuf_initbam_plbuf_set_maskbam_plbuf_pushbam_plbuf_destroysamfaipathaccessfai_buildP`   * ;!"#"$3%8 (?&g'| ()*9 S&g#r$% *$% X*+S#f-y./45-6;7C':;<0<=''!52Fd??$@% *'% *%  &o'''12a8  B W ) . 1; B I b 4i p gw ~ ) N    ]      j & A3 @ M Z -g t  ( e   = 9 D   | =  * 7 D Q ^ k x  y  |    s  T+ 27 C O Q[ zg rs     6    L" . : EF \ h Wt W k #  A      J &  ) 5 A M Y Er  +  U  &  \  L 7, 8 D P \ o z a   .   $  # / 3A [F   z   8 G s ) 4 @ K Et u~  L  9 R ,\ 0| @     `   q    S   % t; @ J $O `X c qm r `w           I W& 5 > G P U ^ Gg l   ?  p  q ` p    ! & 7 h F K X p  W  k  X T d = X b o |     . C)(3kKfp! @8  =WJjWsp}}    N&F S Xu  P"1?Ge  p4 s9 C H zR W $a Wp  % [ =Ub}  9  C %6Jh,Iav  K   m . PI f 0|      i  x" = ZS e 4{       & 8 ? W dl ~    k !  ;: YU p     R > \0@pXbam_index.o/ 1483027702 1939 1168 100644 124368 ` ELF>L@@AWAVIAUATUSHHG 9Gt$HT$ HL$(7rmO 9~;<rH*HD$0YXH,9HD$8InD$1AALDDɃA8@IFT$BHA!AFAFLӿHI^ C1HCHHD$ ʃHHHHD$(KHBHH[]A\A]A^A_ËD$N1AD\$DȃD@IND;Љ)9CA9t8LDA8@tAЉ)9CA9uA9>DDLDA DHI^ K; H{  ΉKHCH~@;<rH*HD$0YXH,9HD$8AAAILLHHA69}IFD$H$CD$fDL$H$ȃHt$MnI~ ELHH|$HHD&D^ LVD1Dȉ1t$f։)9HFHH|DEAAtкHD!‰A967H$&I|HHt$DLN>DFD&D^LVHM 0EAADIFT$BHA!AFAAAILLHHA69-IFD$H$CD$DL$H$ȃHt$MnI~ ELHH|$HHD&D^ LVD1Dȉ1t$ ։)9HFHH|DEAAtкHD!‰A96vPH$uCI|HHt$DLN>DFD&D^LVHM 0EAATHELA6HHD$D DXLPD$9t$;\$rWH<$AFInAAFD$8AF HELA6HHD$D DXLPD$9t$L|$0I~J4I~ IFLHHIF IFH$k‰LDAuAzA9PAFL|$0I~J4I~ IFLHHA6IF L|$0I~J4I~ IFLHHA6IF d J‰LDAFfffff.AWHIAVAUATUSHXHHt$0HT$8Ht$@IHD$HmLLl$0AHID$H|$(D$ LT$+|$ ҉|$$HD$(ILL9Hqw1ofIEIUI IBIRIEIUIBIRI L9v@I9OIEI9ErIEIUI I IBIRIEIUIBIRL9wD$L$HI9y|$$HcLl@HcT$ |$ LT@)H<IIH\$(IIH)IIHD$HD$MLH<$H\$LI9Ht$K1LLLLIfDHHXHHMH]HH9HMs(H9s#HH9rH HZHHMH]fDH9LHIv1f.HoJHH9IwII4HHLH9HvHHpHxHH9HqHywMML$I9HD$LI9M9LK41IFLHHL|$$tH|$8tLHX[]A\A]A^A_H|$0H|$(HL$@Ht$HH9sHHVHHH9HAHQwH|$8uH|$HHX[]A\A]A^A_LHHAHQIIBIRfAUL ?IIIATIAIUH9SIM`|L^LHH4DLMHH9wTIL IPI:IAIT:H9s;HL9tDIIIIIMIIMM)L9rHH9HvM:IM`[]A\A]IHULfff.ATIUHSHHHHtfDHLHHHu[]A\ATHHHUIHSH\t:@HSH1HuHMHHUHEHHsHKLIu[]A\DUSH_H9spIڽIIH)@L9sII)ML;Ds;MYL@JLM;Ds HAHQHLLYHAHQH9rIIL9w[]fAT IUSH1Hv7HWH*^f.H,HCHH@II)IIL9sKIH1IL N9 s"JLYJTHHQN N\HL9r̅d@[HHL^H>L9vsMٽMIL)L9sII(I8I9|v;MPL@J H9I;|s HAHQHH9LQHAHQH9rIIL9w[]A\\H,L1HCH H؃HH H*XfDAWAVAUATUSHHHHHHAv'fDHHH9wHcD4 H@HHx0HIHLIII9AHI4$L)HHHLHH9H1H9r!H9HtHPL LQLLPH1HQHMM\$fII@HL)I|;H9rHH9wH92HH9vIPL HLQH)MHMPHQHL)H9HHHHH9H~MeMEIEuM` H=LLI9M9MeIMIEuHH9NsHvHEHUHMHEHuHUH[]A\A]A^A_fDH91L@L LRLLPH:LBH=~I@ IMEuIIEHLILAHH9w#HL)LHHyLLVLHLUL9IMALIM)@H9sIJH7I9tv;LOH@JH1H;ts HAHQHH1LIHAHQH9rHIH9wH[]A\A]A^A_fDHHHL>H<H9pLNUL9S0HH)HII?IHIIIML9sHMXHQILIPLLYLI9vLVHHQHHVLLQLMM9vMXHHVIIPLL^MHFHVIiMXIIPILVLL^MfILL)H\L9r@IM9wM9wMSIIPIISIMPLLNIL9IPHHVMMHrBLv=H9s.LNI9LL9sLNHHQHHVLLI[HHW]IHHHWfffff.~cATIUHcHSH\>fD*HHSHY,HcHLH9HqHHQH{Hs[]A\fDAW AVIAUATUSHH|$88HHD$XLHD$Hlj+LcLHC~>HE1H,Lt$X fDI^(J+II9uLH\$XHD$xHD$hHD$`HCHD$8XDFD&D^LVHM 0EAACA9DDH|ɋu8DHI^ K; H{7 ΉKHCHIV\$4DȉH!AFH{  Љ ‰ Љ ƒSHcSJ<1HCD)HcA9HCHcHH8H|$ H8+‰H|ɋAD$DxvLt$8HcL|$XHT$Ht$4ANDFD&D^LVHM 0EAAKHELA6HHD$D DXLPD$@9t$@A9%HL$ H=11L$I~J4I~ IFLHHA6IF \HW0H=DHپ11+L$I~J4I~ IFLHHA6IF T$TH=1 `‰H|ɋDD$PD$0fff.AWAVAUATIUSHHD1E1EID$1L<(ID$EL4hEuCA9t4IGډɋu߉؃HIG HxA9uIAHII LI~E9,$aI|$I|$HL[]A\A]A^A_H[]A\A]A^A_ffff.AWHAVAUATUSHH(H|$=HD$Ld$HٺLȉD$HD$H$0THt$H<$HFHHHnL4AFD$HٺLD$AE12DIFDDɋDDIVIIMn EHٺLȉD$AELHپȉD$D$AUI}t8JHHHtHHHHHHHHHHH9uT$HD$Aut9IEHHHH DHHH9HHHPHHPHuAE9>D-E{EHٺLȉD$DHcUH}Ee~$JHHtfDHHHHHH9uHپU~&HMHAH4HHH9HHHu$H|$H$9HD$ H@HD$tHHD$HLHH([]A\A]A^A_HrDH|$Hٺ9@HٺHfDHپH|$HٺLd$wDAWAVAUATUSHHhH9 HH9 HHHHxIHLHIHA$.baiAD$HHHD$ HHH\$PHL$HH HL$HHD$(t H|$(ȉLt$(A.LcLHþLI^IFHD$@L|$@(LHHHD$8HL$LH|$\HӾID=D$\EtȉD$\D$$ZHL$H|$XD-D$XED$ AF A9FInAD$ 1AAH|D7@IFT$ BH!AFAFL˺HI^ HL$H{DkEt͉k+HL$HCHDEtEst>HCHHPHf.HHH9HHHHHHHHuD$$D$$;D$\HL$H|$8D5Et H|$8ȉLt$8IcHA^HL$IFHHD Et1HD$8~&HHHAH4HHH9HHHuD$@H|$(HD$@;H|$(HGH_oD$ K1ADT$ DFIND9vЉ)9CA9t7H|7@itAЉ)9CA9uA9DDH|ɋIFT$ BH!AFȉD$ D$XAF A9FDFD&D^LVHM 0EAATHELHHD$D DXLPD$D$A;9r%H<$AFInAAFD$HAF L|$0I~J4I~ IFLHHIF IFH$렉‰H|ɋuAA9AyAAAILL꾪HHA9[IFD$H$CD$DL$H<$ȃHt$MnI~ ELHH|$HHD&D^ LVD1Dȉ1t$ ։)9HFHH|DEAAtкHD!‰A96vPH$uCI|HHt$DLN>DFD&D^LVHM 0EAATHELHHD$D DXLPD$D$A;L|$0I~J4I~ IFLHHE&IF EhIFH$L|$0I~J4I~ IFLHHE&IF HD$(HL$HxHu HD$(H@DH\$(Et HCHHCH|$HhH[]A\A]A^A_ɉH|ɋAH %1H|$롾HHIIHDI9tRHH1oHHHDH9vfDHH9w8/uHxH6IT$HHHBD%iHIHD$HMzSAVAUATUHSHHtH[]A\A]A^@HH9t>HH9t,H )H[]A\A]A^DHHxIžLHHIH M?AE.baiAELI9t1LI9tHHJHfDL H!%tDHJHDHL)HcITI9vfHI9w:/uLLrHItmLHItxIHcLLLLuLLLH 1H EL@AUIATIUSHHHHHHHMtYLIľLHHHHHHL1H[]A\A]DLHxHIHLLH.baiCvH .H 2LeH /@1fH~7uH~11HHFH~H1HfH +fffff.AVAUATUS}H~HHHHHIH}HI1۽JfID$L4IEIEH41A>1ҍOMVA1D΃-AuIF %d-th chr [bam_index_core] the alignment is not sorted (%s): %u > %u in %d-th chr [bam_index_core] bug in BGZF/RAZF: %llx < %llx [bam_index_core] the alignment is not sorted: reads without coordinates prior to reads with coordinates. [bam_index_core] truncated file? Continue anyway. (%d) [bam_index_load] wrong magic number. [bam_index_load] attempting to download the remote index file. [download_from_remote] fail to open remote file. [download_from_remote] fail to create file in the working directory. [bam_index_load] fail to load BAM index. [bam_index_build2] fail to open the BAM file. [bam_index_build2] fail to index the BAM file. [bam_index_build2] fail to create the index file. Usage: samtools index [out.index] Usage: samtools idxstats iter->curr_off == iter->off[iter->i].vBAIftp://http://rbbamrwb[%s] fail to open BAM. * 0 0 %llu [%s] fail to load the index. %s %d %llu %llu 0 0bam_index.cbam_iter_readbam_idxstats 5a 0`   0 ` Y0`p= ף??]_L?C&I>Aint^^W&P'W)^1-244;8BBWYp! {. 1:  W     ( 0 8 @ H P X "` $h &Wp *Wt ,ex 04 1I 2 6 ?p H I J K L NW P     W: {+ { U:  Wfd W    W  $ W4 W8 W< W@ H P X ` !h $p $xW+ { %7 )Ufpr *Ufpw +[+/X $ %W & ' 'x ,6 0W 1W 2  3( 40 5W8 6W< 7W@ 8H 9P :a 62H W X Y Z [ [  [( \0 \8 ]@ ^8 `tid pos bin            8 ° ` W  W$ W( Ű0 k  0;S <Wtid=Wbeg=Wend=W =Wi=W =W > off?p( Ee BnCDE/ F;  aW j; y?@@AWB/<u0v016pm7n78p<9G;n<m<=>(@ @@@@ @ @ @ v@5 $ [ vu vq idxq t5 iuWluWmuWkvpz Y idx iWjW;  x @5 $D x$!Wa "fn#PW} __cPWJ hJ5 binJWbegJendJkLlM retNW@? h@5 key@ret@x@inc@k@i@@@@ h@5 $@@ j@% t@key@val@vinc@k@i@% tmp@tmp@v&} "m' ' ' ' ( ) ) * OC+ ' ' ,) *? @ 'T 'K ,)_ )j -0 )x .E /U|.E /Uv/T/Q|.E /T2$0E/T4$1) ) 1) ) ) - ) ,) - ) ) ) )' )2 2? @'T 'K ,)_ )j -)x .EB/U|.Ef/Uv/T/Q|.E/T2$0E/T4$-) ) ,) ) ) -) ,) .F/Uw.E)/T2$0E/T4$.,F_/U1/T@3E44>5n464p64p7a248a4p8b4p94W94W--8p4p8i4p8eb4p:P8i44,8p4p8j4p8k4p8ea4p8eb4p:58p4p8i4p8eb4p;F0E/U4$p {44u5i44]_L?94W8gap48tmp4<8i4p8j4p2c4'x'o,)))44 5n45a4p8d4W8top4948rp4<94<8s4p8t4p8i4p8j4p8k4p?c~4'x'o1~)))3E./T|0F/U}@4<t&Fx1WI* 3%': I* 6$&': 0G/T8/Rs.Gg&/U/T4/Q1/Rs.G&/Uv/T4/Q1/Rs0G/T8/Rs:5'Hx:I* ;&': 0G/U|/T8/Q1/Rs.GF'/U /T1/Q4/Rs.AG^'/Us0G/U/T4/Q1/Rs'YKA 7("fpA[LiCWMDLidxE MV5 MW; LkeyXMXLkYLjZWLretZWLp[ LxkWN X 2E_fnFfp[JFfn-r0Lidx O'[0'',)'P')'I R)' -/)')'P'P'(') ()()(O \)0,F/U1/T(I _)' O c,' ' ' ,) -0*) ) ) )' )2 *? @d+'T 'K ,)_ )j -*)x .E*/U}.E*/Uv/T/Q}.E*/T2$0E/T4$1) ) 1) ) ) -Q+) ,) 2? @'T 'K ,)_ )j -,)x .E+/U}.E+/Uv/T/Q}.E,/T2$0E/T4$:,) ) 1) ) ) -,) ,) .F,/Uw.E,/T2$0E/T4$I f -' :Ep-)*(I* mM-': Q* n': I t-' I* y-': I b-' .VG ./U/T4/Q1/R~.VG8./U/T4/Q1/R~.VGb./Us/T4/Q1/R~.E./U v4$ .VG./T@/Qv /R~.VG./U/T4/Q1/R~.,F./Us/T80VG/Ts/Q8/R~I* |>/': .VGh//Us/T1/Q4/R~.,F//U1/T .VG//U/T4/Q1/R~.,F//U|/T8.,F//U|/T@.VG0/U#/T8/Q1/R~.FC0/U /T1/Q%0{G/U~0{G/U~- 1Fs.G0/Us/T .G0/Us.G0/Uv/Ts/Q|0G/Uv/T :6c1FpFlW.GU1/Us3G.G1/Us/T .G1/Us/T .G1/Us.G1/Us.,F1/U|/T1.G2/Uv/Ts.G=2/Uv/T .FU2/Uv.Fm2/Us.F2/Uv.F2/Us.F2/Uv0F/UsR(3"urlMLfnLfp[LbufMULlWN <6EfnFidx -"6JO25'2,S2)2)2)3)3)3.G4/U|/T .G(4/U|/T .HM4/U|/T .Gr4/U~/T .,F4/U@@$/T1.G4/U|/T1/R~.-H4/U}/T|/Q@@$.F4/U|.{G5/U~.LH 5/U}.FJ5/U /T1/Q1.Ft5/U /T1/QE0LH/U}.G5/Uv.,F5/U}/T1.G5/U|/Tv/Q}.F 6/U /T1/Q?07(/Uv.7(:6/Uv.G_6/Uv/T .G6/Uv/T 0F/U /T1/Q)NWP 9EfnTJJ[Ffp'Fidx .aHP7/U}/T .%h7/Us.{H7/Us.G7/U|.G7/U|/T ."7/Uv/Ts. 7/Uv.{G 8/Us.F#8/U|.G;8/U}.,FX8/Us/T1.Gv8/U|/T}.F8/U /T1/Q..F8/U /T1/Q2.F8/U|0F/U /T1/Q/&D H9'U C6/UU/T0NWb9TWTID 9'U 06/T0360F/U /T1/Q+@F:h@F:key@inc@k@i@@L:$ NW=TWTFidx J Ffp 'Fi WU&= -;LkFh5 O9Y;':':,):)':)0:)9:Ia ;'q 0H/U:.H;/U .H;/U 0H/U .aH </T .F#</Us.{H;</Us3(3.Hg</U .F</U}. </U|.F</U /T1/Q".F</T /Q 0F/T /Q &= { =K%Wu="beg%"end%V%u=Li'WLk'WNC(@EidxC'EtidCWEbegCWEendCWJEu=FiFWMFWJFWFoffGpLkHJI5 JJJKO+=T>'T='H='<=,)`=)j=->FnZWO9b?':':,):)':)0:)9:O9jo?':':,):)':)0:)9::X?FjkWFpl -+@FbvSFlwW.,F?/U1/T8. @/U $ &/T3F0F/Uv.,FH@/U1/T0.,Ff@/U J/T2.,F}@/T@.F@/U}.F@/U}0F/UNp*AEidx'EtidWEbegWEendWTJFoffp.{=A/UU/TT/QQ/RR3FD"AT3FCF/UUK4W/B"beg4"end4"b4M6M7NWCEfp'TEbSFretWUC OAC' B'B'A,)B)"B0dF/U|.HC/Uv/Q0.F p= ף?[[[\ W]E^AEW]F_,F]GF`dFW{] FFFF`F]  F'_ F ] WF'S]cWF[abBG(BB]AG([^WVG[]{G[^WG[]VG]G`G({c[G]H^ 3U-H^ >LHU^ EWaHU^ M2{H^ TWH2] WHWH+]iWHa^ vH2W] WIIId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`.?'I4<ab.?: ; n'I<c.?: ;n'I<d.?: ; '<:U:F^FIUI+^+.U."^'T'"HQH++<Q<Q",R,"?S+S+02TZITZZMcT"Z:hUhSSSU:^^^^:0D0DHPHVV0:1T1Ts0s11:HOHaPOTYTQY\ \[i \[Zi UXY UXZ \[Z%Q%X y#XZ u# y#XYXZuYQTJTTQQZ^U ^ UXY UXZbQ{t#{t#MOQO{t# Q "{t#+M"QYIbYbdPxzpq"zPuq"pq"Pzq"TIdTdZMkZp|Z"ZbdPdYYMY"Y.XUXSSSU.^^^^.0PVVV0.1011.<O<QPOYQY-1\ 17\[7 \[Z UXY UXZ \[ZUQ y# u# y#@YuYLNQNbTlTTQU  UXY UXZ0\U\ _ U ? _? 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X! Bn! a! Q! q! ! .! =!  " #" )" =B" X" In"  "  Q Lxp( t  0  @p P,\faidx.o/ 1483027702 1939 1168 100644 96920 ` ELF>@@AWAVAUATUSH8GH|$ Ht$(HD$J@Ht$ H\$HFL~HE7HHD$1E*HЅ.@HRt!f.H)̈́u1ANA1BD$ IoA@fDAuIGDHt$H<t7Dl$ DD)E9DFA9DDDdAAtAulDHRHfIG HT$H|$(DHL@HH$1D$Ht$ HD$9FH8[]A\A]A^A_EKIHD$ 1 fAW AVAUATUSHH|$H(HÿHD$ HCHD$(@H\$HHD$8Lt$(HھLHI HLHHtf|$|$|$D$E1HI1@HT$ t*AIEHt$LAofH %L1NH $1,AWIAVAUIATUSHhHGHHt$ HT$(HD$xIƉD$HcEH11EM@A H0HD~ u HcL5HA9HcDCt0HcЀ|:HTDHz:uD$9DxA9}Ic1H,$Lt LEI,fDHIDHuA,u'AIA9tE&A-uAIA9uLH,$EI\$HcD$HD$0HHD$@HD$D0EMAFA$D$LHD$D<$\$HHl$DLl$8ELPEIL:AuIGDHt$H<t6ADD)E9DFD;4$DDDdAAtEEIAE\$HHl$Ll$8E9HD$DHRH@ HЋxD0HHLx<$|$9DgA9 McDCDJT NT A)J<Lf,t HcT5HH9uHc1 DHD$0HL$LL$LT$H|D9AHL$t2LT$A:-LL$JD Hx-AD9uE~AIcWfDA9\$fDD$D$9ZHD$D01EHD$ WHp@tfH)ʍ u1AvAȉ1$DbHD$D<$Hl$Ll$ELHEIL<@uIGDHt$ H<t3EDD)E9DFD;4$DD\tEHl$ELl$EK@HH|$HG xHHLxD0<$1E1H9HcHDNH9MD9DNED){HcHDI}<$AHcI1HI4IMuEA)/D9~>MuAu/T$_HHf%s [fai_build_core] inlined empty line is not allowed in sequence '%s'. [fai_build_core] different line length in sequence '%s'. [fai_build_core] the last entry has no sequence [fai_build] fail to open the FASTA file %s [fai_build] fail to write FASTA index %s [download_from_remote] fail to open remote file %s [download_from_remote] fail to create file in the working directory %s [fai_load] failed to open remote FASTA index %s [fai_load] build FASTA index. [fai_load] fail to open FASTA index. [fai_load] fail to open FASTA file. 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HH|$HHt$HIź I9uHl$@L|$HE8-NDHC0Hj0HD$(Hl$@IHD$HIE.E<$Et[E HIDptIDpE8I~IL$IH|$@HL$HE.IE<$EuELH+L$(LH)H9u8HD$ PHcJT$ HcH HcH CH HH кH9r1HD$HHt$@ LH|$HHt$HIź I9Lt$@Ld$HE8\H\$H|$H9\$8HHHHHD$HD$HD$0H\$H9s~HH9H\$uHD$D H(HD$0EL jAD$HcMPIc$H HcH H ‹EHH H9tH\$H|$0HHHHHD$8HHX[]A\A]A^A_HD$HHD$0IL9I9\Ls0HE0MHD$(HD$@Lt$HH"E8H{It$H|$@Ht$HIHD;E,$EtsEjHMBD@tMBD@tHt$@Hߺ H|$HHt$HHú H9H\$@Ld$HD;E,$EuEH+\$(LL)H9u>EHHcEHcH H HD$ XHcS\$ H HcH ¸H91ID$0Ls0HD$(HD$@MLt$HH!A8JH}IwH|$@Ht$HIHDmAEtrHMBD@tLBD@tHt$@ HH|$HHt$HHú H9`Hl$@L|$HDmAEuHH+|$(LL)H9u?AD$H\$ HIc$HcHcH H H CD$ HH кH9X1QHD$ Lp0ID$0MHD$(HD$@Lt$HH!A8H}IwH|$@Ht$HIHDmAEtrHMBD@tLBD@tHt$@ HH|$HHt$HHú H9Hl$@L|$HDmAEuu\HH+|$(LL)H9|Nu;AD$H\$ HIc$HcHcH H H CD$ HH кH9r1 A8}HD$0L A8dHD$H(E8H\$L#CID$0Lu0HD$HD$@MLt$HIAUAtUT$T$HHDpt HDpuJ8IILl$@L|$HAUAuL+l$M)M9%Ht$@ LH|$HHt$HHú H9u&Ll$@L|$H>H9H9mH9H9u8AD$pIc$HcH H ƋEPHcEHcH H ¸H918I8H9jH9H9tH9ff.ATHcǃIUSH\~:f.*H HY,HIHHHS[]A\ff.AWAVAUATIUSHH8>-=|$,HT$DD$(~H=HHHHD$LHHHD$ D$IME11'fDHxDHIIM9I6Hu@8HIHytH 1Dd$ED|$H=1EgDLt$LD$E1LDLvLHxD\$(IEA-fDIcE1HfH|$HxHT$JDHǾ1IE9ċ|$,LE1ID1H$LE1f.J<JHCL9uLH|$H8H[]A\A]A^A_D$LD$E1LލHAHL$D|$HHHnH=H8H[]A\A]A^A_1DL$(LD$LHL$޿DHT$HǾ12E1AVE1AUAeATE1USHHމxMnt8ot#muH= 1IfDAAHcP9~*HELHHtD[]A\A]1A^@H ?[]A\A]A^[bam_merge_core] cannot open '%s': %s [bam_merge_core] fail to open file %s [bam_merge_core] different target sequence name: '%s' != '%s' in file '%s' [bam_merge_core] number of @SQ headers in '%s' differs from number of target sequences [bam_merge_core] @SQ header '%s' in '%s' differs from target sequence [%s] Malformated region string or undefined reference name [%s] fail to create the output file. [bam_merge_core] '%s' is truncated. Continue anyway. Usage: samtools merge [-nr] [-h inh.sam] [...] Options: -n sort by read names -r attach RG tag (inferred from file names) -u uncompressed BAM output -f overwrite the output BAM if exist -1 compress level 1 -R STR merge file in the specified region STR [all] -h FILE copy the header in FILE to [in1.bam] Note: Samtools' merge does not reconstruct the @RG dictionary in the header. Users must provide the correct header with -h, or uses Picard which properly maintains the header dictionary in merging. [%s] File '%s' exists. Please apply '-f' to overwrite. Abort. [sort_blocks] fail to create file %s. [bam_sort_core] fail to open file %s [bam_sort_core] truncated file. Continue anyway. [bam_sort_core] merging from %d files... Usage: samtools sort [-on] [-m ] .bamrwuw1wRGh:nru1R:frb%s.%.4d.bam%s.bamnom:bam_mergebam_merge_core]_L?C Y1intF4ZZ}4Z1;          A oL 1\  4     ( 0 8 @ H P  X "` $!h &4p *4t ,x 0o 1v 2' 67 ? 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* y6 B {N Z f r ~ {   7 ^  D  - @9 E Q jg s :   \  - a y    o  ( F4 @ mL 5X d j}  -    _   S! &,?7WDr|RuD VNe Mo t y~ 4     N0;8$/;D dO Y ^;o Ry ~  ?Nbo w ( = G X e      R 2 , 7  V h }   l     3 5M K * \kprobaln.o/ 1483027702 1939 1168 100644 30224 ` ELF>T@@AWAAVAUATMUSLHH$H|$HT$0ʉL$ H$D$f@!D9@|$gALAƉD$hAA9OD)ȉ1)9M‰D$`$DhFHcD$XHEHD$@HD$8t$ xtClmE1D|$H\$ Dt$hLHcL|$@Dl$ HA9|5HEItHH|$8HHA9}D|$H\$ Dt$ A~HcHD$IcƾHHD$pWHD$(.ztCL$ 1|HL$(t$ @H9~SHu1*^ ffZ<HHuŋL$ 1D$XD-%H\$@fA(Ht$A**HD(D.Al$LC\fA(DhD$`DHD9ZEMZE^A$D\A(\D^Z\$f(^EYZYEZYZYD$$ +D$`AID$H|$fWL\$(DYLT$0øHIH|$É$)fE(͍@DD$HID@ fA(w#A2@wA@8ZE AYAYHDH@AXH9Xu$HD$A)PCtI)؍@F9/)HcʍVIHITDH^@H9u|$ kD$`\$ D|$ fEWL|$@D))DD%\$HfE(1ۉD$Pft$PiH|$(AAMlIDD4t$ D\DOH|$0EZfE(D9DNDTDIE9<ɾDHDLD$))McˍLvRK|MEHcHcE)HtHTDDD)MD) ID@fE(HcHILID@DfA(Aw!AwE8"fA(AYBHD:HYHHDYHAXDzDYAXY@VD~YDYAXAYPQDyX@YDYAXXPL9DX3E)E)HD$CT[CLvfA(9DDA^0Hc)IDHITH@Y@H9uH;l$HtfA(A\D|$ E t$ +t$`H\$pCL$D$H$|@HD$@Lظ)4v@)HcH@~&9~"I0DLAYEYAXXЃH9uT$xHD$pDd$XH|$T$xHEHm$1D5IT$ fA(Dt$X\$p$$$$$HA9|OAYDf.vT$PHDl$HYD$XA9T$PDl$HXD$ D$ }\$p$$$$$A*D$$$$d$pL$P\$HY*D$ Yf(YD$XT$h\$HL$Pd$p$$XD$ $D$X,$E|$ +|$`HT$8LCT$xD$H$HTt@)<@HcHTCL)H|$D~9~fA(B^^BH9uԋD$ DXE~Ht$8Ic1fEWfE(HtHt$HHt$(H4 (08@HP X"v`$|h&4p*4t,x0o1v26?HIJKL;N4P  v v | 4E  >  1h d e bw!4"H48 H H4H H4H cI ITqI fK bK sK mK sIK-sMK-bIK-bMK-pbK-L L refM M ~1bwN4bw2N4iN4kN4N4N4PrN4Nfiq sumq-begr4endr4r4r4#ut4eu-:x|4x|4rfi fi1 sum-qli-beg4end4x444qyi;u4v114v014v104e-Rx4x4sum-u4p-Pr1-O O d ^(u4bi Jbeg4end4x444bi bi1 y--u4v114v014v104e-*x4x4beg4end4sum-u4e-L sum-fi bi max-beg4end4x44> u4z-O v i UvT8v UvT8v UvT8v U~ $ &T8v U~T4  a -$@bv4--$@d d d Q U~d d x U~d U~ v UvT8 ! ! - -   ( "|"|#, #- $logn-d %-& v %'  %;%;(pow-%-%-% $ > $ > : ; I I  : ; : ;I8 : ;  : ;  : ; I8 I !I/  : ;  : ; I8 .?: ; 'I@B: ; I: ; I: ; I: ; I4: ; I4: ; I4: ; I U U 1 4: ; I1B 1!&I"4: ; I?<#4: ; I?$.?: ; 'I<%I&.?: ;'<'.?: ;'I<(.?: ; 'I<IUIg ~g U ~ RURx~xU8~T_8~8T_8T1Q18~qRqT8}XS8~8XS8XYn\nY\Y\Y#\#8YP~P8~0~0P8~SVPV~8~dbbg([~(dbbg(#dbbg(g ~ ~#~ c ic8lolll#o#88 B pB g ~##.p~4{|~4{|~48~4pP~P~8~ag ~1g U1 ~1 RU1Rx~1xU18~1aQP8~]#]8#0s%S%)s{0PpPVv0n2qx ~v"#]0vV  [ - {- ^ [8 g 1g vvS0SRx[xv[0#.0.8[l1l q~#QR2s3<[<y u~#0IQx u~#1 s 1p  S R  QA Q  q  Q g 3 R r RQ q~#RgRgxSxRQQ1#1#.38 0 0Rx0#0.80a1aePe^ ~ ~^#~ & P& P#8nXn~#X~##Xl lcc# 181YE~#~ $ $-(E#~#~~ $~ $-(Y#YQR12s31 23 p3W 23W Y p3Y  23 23 23#8 23tPn y1$y"#n-~#~~ $~ $-(3#s q3"~3#a#8#8]Pk s3$"#kx s3$"#x s3$"# s3$"#< < i5xcxicl1[xv1v $0+(x[v1v $0+(T^x+~v~"1~ $v~"1 $,(x^+~v~"1~ $v~"1 $,(qx ~1$v"#0IQIx {1${"# {1${"#0<R<x ~1$~"# ~1$~"#Zpyu|~#3pyuv0v $0*(~#3pyu|~#3pyuv0v $0*(~#3pc0x\\ 4c &P&4p}] ?a& ?&[a ?] ~&a&[~--Zd;_~-" s P p}s ~s"8 d 1d f Sf U 3 ~Rg~gxU.81 p _p S - !~{" $~{" $,(- 3 %{~"# ${~"# $,(RxS.8_U d \d - ~{"- 3 {~"#Rx ~{"  Q 3 ~|3# R 3 s1$s"# 3 ^Rx^.8^ P % ~Rg~goPox~.8P/ i 3 cRxiP 3 oRxoU 3 ]Rx] [ | r3"#[ | r3"#Rg | r3"# [ &~{"0~{" $0*( r3"#[ &~{"0~{" $0*( r3"#Rg&~{"0~{" $0*( r3"# [ | r3"#[ | r3"#Rg | r3"# [ &~{"0~{" $0*( r3"#[ &~{"0~{" $0*( r3"#Rg&~{"0~{" $0*( r3"#O a 3 \ 3 \3 1x11#.1A   dd    q3"#   q3"# ag  a ba-v $ &3$~"--x  Q R v3$~"#xQ RZxZ  c b c ac8--x  R r v"sv" $0+(xR RTR|~v"| $~v" $,(xT  ~v"#x ~v"#  Ux  v" $0 $+( r3"#  v" $0 $+( r3"# b qx-px- a qh-ph-,8GKZ^dknrux# 1J6hwk6;@h@ 9>MP]9>MP]   ) Xx.8   X c Xx 3 ' , 8 I  L x @ /cm/shared/apps/gcc/4.8.2/lib/gcc/x86_64-unknown-linux-gnu/4.8.2/include/usr/include/bits/usr/includekprobaln.cstddef.htypes.hlibio.hstdint.hkprobaln.hstdio.hmathcalls.hstdlib.h y w.QZ:Hwgg;sXg=;K.K;YJXXqL0ɉxX`xX2TRy5Y*h-/n2;KR xQ!:KY=uNu#/Iy Wu*n؆ZYU%XY. `T=1r[9[K*\QKS3E6trLrW<e[4<f/XMWu fI <R0#J double_IO_FILEGNU C 4.8.2 -mtune=generic -march=x86-64 -g -O2_IO_save_endsize_tsizetype_offsetl_query_IO_write_ptr_flags_IO_buf_baseshort int_markers_IO_read_enduint8_tkpa_par_tqualkprobaln.cfreesigned charmax_kfloat_beglong long int_lock_endlong int_cur_columnunsigned charkpa_glocal_poskpa_par_def_old_offsetqyi1long long unsigned intunsigned int_IO_marker_shortbuf__pad2_IO_write_base_unused2_IO_read_ptr_IO_buf_endcharcalloc_next__pad1qli1__pad3__pad4__pad5kpa_par_altis_backwardl_refqueryshort unsigned intlong unsigned int_IO_write_end__off64_t_filenostate_chain__off_t_IO_backup_basestdin_query_flags2_mode_IO_read_base_vtable_offset/work-zfs/mschatz1/rb/ELSA/samtools-0.1.18_sbuf_IO_save_baseg_qual2probis_diffiqual_ref_qualstdout_IO_lock_tGCC: (GNU) 4.8.2zRx L8BGB B(D0A8J+ 8A0A(B BBBG .symtab.strtab.shstrtab.rela.text.data.bss.rodata.cst8.rodata.cst4.rela.debug_info.debug_abbrev.debug_loc.rela.debug_aranges.debug_ranges.rela.debug_line.debug_str.comment.note.GNU-stack.rela.eh_frame @8]&x, 18>P KXaX\!j'zyF0uu0 F)KDu0mO<0RRRhu(SZ  ]w     "',1(6 ;0@8KRVZ_ k kprobaln.cg_qual2prob.LC4.LC1.LC3.LC5.LC6.LC8.LC7.LC9kpa_glocalcallocpowlogfreekpa_par_altkpa_par_defJds  WJ[s"+   <   Ow!+5   ) 0 < MI 7P s]  d k !r $y   v W T  \  {     m I  - : G ~T @a n o{ a  K     ]      $ 1 ? 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U" # $1%B&1'1(4: ; I?<).?: ;'I<*I+.?'I4<,-.?: ; n'I<..?: ; 'I</.?: ;'<0.?: ;'I<7U7FFXUX;T;^FTFUTUg^gT^;Q;FF\Q\;R;~S~FRF\R\gSgRSMFg]]~PSFSgS~0Fg r-&;r\\F\g\P$$@P@FKPPdXdP PP 04VyVV11F1g1UpU u-u p#)t^^55 P5Uz\zU\U\TxVxTVTV02^26P6~^^^0]P|]]]PP9GPosPsvS"+P+9SPS, &zPg y@81 /cm/shared/apps/gcc/4.8.2/lib/gcc/x86_64-unknown-linux-gnu/4.8.2/include/usr/include/bits/usr/include/usr/include/sysbam_cat.cstddef.htypes.hstdio.hlibio.htypes.hstdint.hknetfile.hbgzf.hbam.hgetopt.hstdlib.hstring2.h Dx<fIIY'V0K/;Y=s fKL( WKKiF<GtXQ.gkfp/;0:= w;=2;=Y;/Y/opfXz<__off_toutfn_IO_read_ptrmallocsize_t_shortbufisizetamFilebgzf_opentypepath_IO_buf_baselong long unsigned intdiffctrl_fdfreebam_header_t__tamFile_tresponsebgzf_writelong long intsigned char__builtin_fwrite__strdup_fileno_IO_read_endlong int_flags__s2_len_IO_buf_end_cur_columnebufl_text_lock_offsetknetFile_scache_sizesam_openfp_fileoff_toptargis_readytarget_nameportmain_cat_IO_markerstdinpasv_portuncompressed_blockunsigned intmax_responsefprintfBGZFlong unsigned int_IO_write_ptr_sbuf__resulttarget_lenshort unsigned intgzip2size_cmdfile_descriptor_IO_save_baseseek_offsetGNU C 4.8.2 -mtune=generic -march=x86-64 -g -O2no_reconnect_flags2_modestdoutretrsam_closehttp_hostn_textblock_lengthbamFilebam_cat.csizetypesam_header_readknet_readbgzf_flushoptind_IO_write_endblock_offsetcompressed_block_size_IO_lock_t_IO_FILE__s1_lenrg2lib_poserroropen_modegzip1_markerspasv_ipint32_tunsigned charshort int_chainknetFilecompressed_block__func__FILEbgzf_close/work-zfs/mschatz1/rb/ELSA/samtools-0.1.18bam_header_writeuint32_tdictfileno__s1outbamcharblock_addresstextn_targetshostargcint16_t_next__off64_toffset_IO_read_basememcpy_IO_save_endhashbam_header_destroy__pad1__pad2__pad3__pad4__pad5_unused2stderruncompressed_block_sizebam_catfwriteowned_fileuint8_t_IO_backup_basebgzf_fdopen_vtable_offsetgetoptbam_header_readint64_t_old_offsetcompress_levelargv_IO_write_basecachefile_sizeGCC: (GNU) 4.8.2zRx LBBE B(A0A8G 8A0A(B BBBE Ll BEE D(D0 (A BBBB ] (A BBGA .symtab.strtab.shstrtab.rela.text.data.bss.rodata.str1.1.rodata.str1.8.rodata.rela.debug_info.debug_abbrev.debug_loc.rela.debug_aranges.debug_ranges.rela.debug_line.debug_str.comment.note.GNU-stack.rela.eh_frame @9H& , 12 )@284Ol\}W?h"v' "0W0 "#<W0&&0,/,0,W0,4h x8+      '/6=IZagw~  $bam_cat.c__func__.4495__func__.4529bam_catstdoutfilenobgzf_fdopenbam_header_writemallocstdinbam_header_readfwritememcpyknet_readstderrfprintfbam_header_destroybgzf_closefreebgzf_openbgzf_writebgzf_flushmain_catgetoptoptarg__strdupsam_opensam_header_readsam_closeoptind38= Dis H\p# ( 2 9H Mdn!v"#" $  X %&=Q Y$ot y 0     $()*)+(,3-C.Z "fp#     ~  ) . "; B I 2P W ^ l q |   |           D U * d7 nD Q ^ k x   &  ) > D      ! $/ u6 B N Z  s     b f [  L K. : F R ~^ j v      K r  P  = TI U [a w 4 _     R W     % 1 '= dI U a 7m y   9  L  `  u [ " k, 0; f@ 2b g q z     p [  : 0   g  ! + p0A pK P Z a j yt ~yL`t X !6 @ E EO T 3^ c6x Qh  " A p  r z     A< M 0Z  e <r H  m w   ] # 4 A     6   F   L    " 5 : G ,_ 7w     $  j " t 1 \ g r -} y = T    T i/ ~I _ (~   A  2 J $ 6 bL b t   > pknetfile.o/ 1483027701 1939 1168 100644 42848 ` ELF>_@@UI1H`HT$0D$D$ D$$HD$(HHHL$(LD$8HD$(P pxHL$AHL$ A tlHD$(PHpu5H|$(H`]H|$(DH|$(DD$ H|$(D$ f.H|$(tDHALL$ HD$HD$1LHA@?EAxAIHcDA LD$?)HH D 1HIEID1Ht HĨfD$ D$ HĨfDATUSHH 81@HCHT$De(|$ tAIc{ Ht$HC89|ąthHcH{HC8HCH뭐A~:HHCHHDJt#HHDJtHHDJt x-tIc.E1w@~HCHD(H{HHt$1H[]A\@H1[]A\DAUATUSHHHtJAI1!@It-HDHtHH)tDHH[]A\A]1ATAUH1SH ~5H{ HH1Eu[]A\H[]A\4@fSHHwHC t@HHmH[HI1[DSH t C {CH[AWAVAUATIUSHHH1H9!QLiLt/u fDt H/u1/II)@AHHt 21@fA~HEHccLIHEHtE<IcLLHHxHھHHEP1HHxHHEXHǾ1HE`HH[]A\A]A^A_@SHHĀts<pH~HSH<(uH<(tu<(uZHD$DHzHL$4LL$rHH9HH9tF1H1X@ H[]fHHHHtHSHuH1fDH (H1[]@HHHHtHHtS1OgetaddrinfosocketsetsockoptconnectselectUSER anonymous PASS kftp@ TYPE I ftp://RETR %s SIZE %s PASV %d,%d,%d,%d,%d,%d%*d %lld[kftp_connect_file] %s REST %lld %d.%d.%d.%d%d80/http://http_proxyGET %s HTTP/1.0 Host: %s Range: bytes=%lld- [knet_seek] %s open[kftp_pasv_connect] kftp_pasv_prep() is not called before hand. 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