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| Name | Last modified | Size | Description |
|---|---|---|---|---|
| Parent Directory | - | ||
| CPUfunctions.h | 2017-05-25 15:26 | 897 | |
| CounterReader.cpp | 2017-05-25 15:26 | 13K | |
| CounterReader.h | 2017-05-25 15:26 | 606 | |
| CounterReader.o | 2017-12-12 09:46 | 9.3K | |
| FisherExactTest.cpp | 2017-05-25 15:26 | 17K | |
| FisherExactTest.h | 2017-05-25 15:26 | 912 | |
| FisherExactTest.o | 2017-12-12 09:46 | 25K | |
| HSP.h | 2017-05-25 15:26 | 4.9K | |
| Makefile | 2017-05-25 15:26 | 844 | |
| README.md | 2017-05-25 15:26 | 1.4K | |
| RegionIndexBuilder | 2017-12-12 09:46 | 22K | |
| SAMhandler.cpp | 2017-05-25 15:26 | 2.2K | |
| SAMhandler.h | 2017-05-25 15:26 | 1.2K | |
| SAMhandler.o | 2017-12-12 09:46 | 3.9K | |
| SNP.cpp | 2017-05-25 15:26 | 95K | |
| SNP.h | 2017-05-25 15:26 | 4.3K | |
| SNP.o | 2017-12-12 09:46 | 88K | |
| SNPFunctions.cpp | 2017-05-25 15:26 | 3.9K | |
| SNPFunctions.h | 2017-05-25 15:26 | 336 | |
| SNPFunctions.o | 2017-12-12 09:46 | 11K | |
| SNP_Caller.cpp | 2017-05-25 15:26 | 21K | |
| SNP_Caller.h | 2017-05-25 15:26 | 2.3K | |
| SNP_Caller.o | 2017-12-12 09:46 | 16K | |
| SNP_Meta.h | 2017-05-25 15:26 | 3.4K | |
| SNP_Stat.h | 2017-05-25 15:26 | 3.1K | |
| SimpleMemoryPool.h | 2017-05-25 15:26 | 460 | |
| SnapshotHandler.cpp | 2017-05-25 15:26 | 14K | |
| SnapshotHandler.h | 2017-05-25 15:26 | 477 | |
| SnapshotHandler.o | 2017-12-12 09:46 | 19K | |
| VariantCaller.cpp | 2017-05-25 15:26 | 38K | |
| VariantCaller.h | 2017-05-25 15:26 | 1.4K | |
| VariantCaller.o | 2017-12-12 09:46 | 44K | |
| bam.h | 2017-05-25 15:26 | 8.8K | |
| bam2snapshot | 2017-12-12 09:46 | 636K | |
| bam2snapshot.cpp | 2017-05-25 15:26 | 21K | |
| bam2snapshot.h | 2017-05-25 15:26 | 2.4K | |
| bam2snapshot.ini | 2017-05-25 15:26 | 351 | |
| bam2snapshot.o | 2017-12-12 09:46 | 29K | |
| bgzf.h | 2017-05-25 15:26 | 1.8K | |
| buildRegionList.cpp | 2017-05-25 15:26 | 8.0K | |
| buildRegionList.o | 2017-12-12 09:46 | 9.9K | |
| bwt.h | 2017-05-25 15:26 | 942 | |
| coreStruct.h | 2017-05-25 15:26 | 3.6K | |
| definitions.h | 2017-05-25 15:26 | 1.6K | |
| dependencies.h | 2017-05-25 15:26 | 3.8K | |
| filterVCF.pl | 2017-05-25 15:26 | 7.6K | |
| fisher.cpp | 2017-05-25 15:26 | 2.2K | |
| fisher.h | 2017-05-25 15:26 | 329 | |
| fisher.o | 2017-12-12 09:46 | 5.2K | |
| getIndelDetails.pl | 2017-05-25 15:26 | 5.2K | |
| indexFunction.cpp | 2017-05-25 15:26 | 1.8K | |
| indexFunction.h | 2017-05-25 15:26 | 442 | |
| indexFunction.o | 2017-12-12 09:46 | 4.7K | |
| interpreter.cpp | 2017-05-25 15:26 | 5.8K | |
| interpreter.h | 2017-05-25 15:26 | 933 | |
| interpreter.o | 2017-12-12 09:46 | 11K | |
| lib/ | 2017-12-12 09:20 | - | |
| likelihood_cache.cpp | 2017-05-25 15:26 | 7.6K | |
| likelihood_cache.h | 2017-05-25 15:26 | 2.1K | |
| likelihood_cache.o | 2017-12-12 09:46 | 9.2K | |
| readIndex.cpp | 2017-05-25 15:26 | 4.5K | |
| readIndex.h | 2017-05-25 15:26 | 1.2K | |
| readIndex.o | 2017-12-12 09:46 | 5.4K | |
| sam.h | 2017-05-25 15:26 | 577 | |
| snapshotSnpcaller | 2017-12-12 09:46 | 1.4M | |
| snapshotSnpcaller.cpp | 2017-05-25 15:26 | 8.6K | |
| snapshotSnpcaller.ini | 2017-05-25 15:26 | 351 | |
| snapshotSnpcaller.o | 2017-12-12 09:45 | 13K | |
| struct.h | 2017-05-25 15:26 | 412 | |
| txt2vcf.pl | 2017-05-25 15:26 | 38K | |
| ycsq.cpp | 2017-05-25 15:26 | 901 | |
| ycsq.h | 2017-05-25 15:26 | 286 | |
| ycsq.o | 2017-12-12 09:46 | 2.4K | |