Rscript ~/code/spp/spp_package/run_spp.R -c=narL_1.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=narL_1.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=narL_2.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=narL_2.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=puuR_1.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=puuR_1.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=puuR_2.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=puuR_2.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=rcsA_1.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=rcsA_1.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=rcsA_2.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=rcsA_2.1x36mers.QC