python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- Sig70_exponential_aerobic_growth_no_rifampicin_applied_replicate_1.SE.a.bam /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes Sig70_exponential_aerobic_growth_no_rifampicin_applied_replicate_1.SE.a.wig -notitle -RPM -uniqueBAM
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- Sig70_exponential_aerobic_growth_no_rifampicin_applied_replicate_1-2.SE.a.bam /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes Sig70_exponential_aerobic_growth_no_rifampicin_applied_replicate_1-2.SE.a.wig -notitle -RPM -uniqueBAM
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- Sig70_exponential_aerobic_growth_no_rifampicin_applied_replicate_2.SE.a.bam /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes Sig70_exponential_aerobic_growth_no_rifampicin_applied_replicate_2.SE.a.wig -notitle -RPM -uniqueBAM
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- Sig70_exponential_aerobic_growth_no_rifampicin_applied_replicate_2-2.SE.a.bam /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes Sig70_exponential_aerobic_growth_no_rifampicin_applied_replicate_2-2.SE.a.wig -notitle -RPM -uniqueBAM
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- Sig70_exponential_aerobic_growth_rifampicin_applied_for_20_minutes_replicate_1.SE.a.bam /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes Sig70_exponential_aerobic_growth_rifampicin_applied_for_20_minutes_replicate_1.SE.a.wig -notitle -RPM -uniqueBAM
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- Sig70_exponential_aerobic_growth_rifampicin_applied_for_20_minutes_replicate_2.SE.a.bam /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes Sig70_exponential_aerobic_growth_rifampicin_applied_for_20_minutes_replicate_2.SE.a.wig -notitle -RPM -uniqueBAM
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- Sig70_static_aerobic_growth_no_rifampicin_applied_replicate_1.SE.a.bam /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes Sig70_static_aerobic_growth_no_rifampicin_applied_replicate_1.SE.a.wig -notitle -RPM -uniqueBAM
python /oak/stanford/groups/akundaje/marinovg/code/makewigglefromBAM-NH.py --- Sig70_static_aerobic_growth_no_rifampicin_applied_replicate_2.SE.a.bam /oak/stanford/groups/akundaje/marinovg/genomes/Bacteria/Escherichia_coli_str._K-12_substr._MG1655-ASM584v2/GCA_000005845.2_ASM584v2_genomic.chrom.sizes Sig70_static_aerobic_growth_no_rifampicin_applied_replicate_2.SE.a.wig -notitle -RPM -uniqueBAM